Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0133
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    24   1.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.5  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 148 YFTAFPVTDD*GELFIDWNIVLLLAY 225
           +FT+ P+TD    L   WN +L+ A+
Sbjct: 234 HFTSLPLTDQVQLLRAGWNELLIAAF 259


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 303 LINDARTCPSSNEACGE 353
           LI D   CP  + ACG+
Sbjct: 110 LITDEPLCPDGSLACGD 126


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 555 ILYFYNHKFR*DYTIKNINKGKQYLIYSQFDNRRQEQKFHNK*C 686
           +LY  ++       I N+N    +  +   D  ++ Q  HNK C
Sbjct: 177 VLYICSYTVLIRNKISNLNTSLIHSTHLNGDIVKEHQNLHNKIC 220


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -3

Query: 626 ILFAFVNIFYSVVL 585
           ++F FVN+F+ V++
Sbjct: 97  LIFIFVNVFFWVII 110


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 198 LEYCFTTGLLPVIL 239
           ++Y FT  LLP+I+
Sbjct: 131 IDYLFTVYLLPIII 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,020
Number of Sequences: 336
Number of extensions: 2872
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)