Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0131
         (640 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060885-1|AAL28433.1|  112|Drosophila melanogaster GM04427p pro...    91   2e-18
AE013599-3682|AAF47058.1|  112|Drosophila melanogaster CG5532-PA...    91   2e-18
AY089314-1|AAL90052.1|  257|Drosophila melanogaster AT12418p pro...    29   5.3  
AE013599-3497|AAF46923.1|  257|Drosophila melanogaster CG13533-P...    29   5.3  

>AY060885-1|AAL28433.1|  112|Drosophila melanogaster GM04427p
           protein.
          Length = 112

 Score = 90.6 bits (215), Expect = 2e-18
 Identities = 48/97 (49%), Positives = 58/97 (59%)
 Frame = +2

Query: 74  MGLDIIGFAYAATVAAGGVMGYAKAGSIPSLGAGIIFGSILGVGAYQLSQDPSNYXXXXX 253
           M +D  G+ YAATVAAGG+MGYAKAGSIPSLGAG+ FG++LG GA+  SQD         
Sbjct: 1   MPVDWFGYVYAATVAAGGIMGYAKAGSIPSLGAGLAFGALLGYGAHLNSQDTPRPLLQLG 60

Query: 254 XXXXXXXXXXYRYYNSRKFMPAGLMFCLSVGMFTKLL 364
                      R+  S K MPAG++  LSV    K L
Sbjct: 61  TSLFLAGLMGARWNRSGKLMPAGMVCMLSVAALVKNL 97


>AE013599-3682|AAF47058.1|  112|Drosophila melanogaster CG5532-PA
           protein.
          Length = 112

 Score = 90.6 bits (215), Expect = 2e-18
 Identities = 48/97 (49%), Positives = 58/97 (59%)
 Frame = +2

Query: 74  MGLDIIGFAYAATVAAGGVMGYAKAGSIPSLGAGIIFGSILGVGAYQLSQDPSNYXXXXX 253
           M +D  G+ YAATVAAGG+MGYAKAGSIPSLGAG+ FG++LG GA+  SQD         
Sbjct: 1   MPVDWFGYVYAATVAAGGIMGYAKAGSIPSLGAGLAFGALLGYGAHLNSQDTPRPLLQLG 60

Query: 254 XXXXXXXXXXYRYYNSRKFMPAGLMFCLSVGMFTKLL 364
                      R+  S K MPAG++  LSV    K L
Sbjct: 61  TSLFLAGLMGARWNRSGKLMPAGMVCMLSVAALVKNL 97


>AY089314-1|AAL90052.1|  257|Drosophila melanogaster AT12418p
           protein.
          Length = 257

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 113 VAAGGVMGYAKAGSIPSLGAGIIFGSILGVGAYQ 214
           V  G + G+ K G++P +  G+I G  +G  +YQ
Sbjct: 60  VKNGYLQGHVKYGAVPKVVMGVILGYFVGKFSYQ 93


>AE013599-3497|AAF46923.1|  257|Drosophila melanogaster CG13533-PA
           protein.
          Length = 257

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 113 VAAGGVMGYAKAGSIPSLGAGIIFGSILGVGAYQ 214
           V  G + G+ K G++P +  G+I G  +G  +YQ
Sbjct: 60  VKNGYLQGHVKYGAVPKVVMGVILGYFVGKFSYQ 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,917,821
Number of Sequences: 53049
Number of extensions: 443340
Number of successful extensions: 888
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)