Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0130
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    24   1.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.8  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   3.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   5.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.4  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   7.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.7  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   9.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   9.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   9.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   9.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   9.7  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   9.7  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   9.7  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   9.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   9.7  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 584 ICCLSGLVANDETAQCFW 531
           I C +GLV ND+   C W
Sbjct: 136 ITCPNGLVYNDKAGICSW 153


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 443 PLSLRCPGTVCLPWKRHCHNSPSRTGTFLSRSTERSHHS 559
           PL+    G    PWK+    +PS + T  S  T+R+  S
Sbjct: 54  PLADAAVGKGFHPWKKSPQGAPSPSSTPSSLPTQRTSTS 92


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -1

Query: 504 ELWQWRFHGKHTVPG--QRRLNG--LRICSLGQQKLPVVFSVHRFRI 376
           EL+Q +  G   V     R L G  L   +  ++ L V+F++H+FRI
Sbjct: 615 ELYQIQEDGSRGVIAFASRSLRGPELNYTTTEKELLGVIFALHKFRI 661


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 403 NREFLLPKGTNPEAIKSSLSRDGVLT 480
           N + L PKG N   I+  +  +GVL+
Sbjct: 833 NNKRLEPKGDNRYTIREEILANGVLS 858


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 15  TRLAIFRLSIQNLKHQRALRCRNEE 89
           TR  I   + +NLKH   LR +N++
Sbjct: 370 TREEIHEKARENLKHHANLRQKNQK 394


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 301 YTPEEIVVKTVDNKLLVHAKHEEKSDT 381
           YTP+   +   +N   +  KHE++++T
Sbjct: 2   YTPKLSQMDISENSTYLFDKHEDRNNT 28


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = -1

Query: 486 FHGKHTVPGQRRLNGLRICSLGQQKLPVVFSVHRFRIR 373
           FH  H +  +RR+       L ++++ + F   R +++
Sbjct: 242 FHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 279


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 533 WIGMFLSVMASCGN 492
           WI  FL+ M  C N
Sbjct: 145 WISFFLNFMLHCNN 158


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 431 VPLGNKNSLLYSLYTDFVSDFSSCLAWT 348
           V L    ++LY L  D V++F+    W+
Sbjct: 150 VGLIRDTAVLYRLLADNVANFNKIFGWS 177


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = -1

Query: 486 FHGKHTVPGQRRLNGLRICSLGQQKLPVVFSVHRFRIR 373
           FH  H +  +RR+       L ++++ + F   R +++
Sbjct: 24  FHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 61


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
 Frame = -1

Query: 519 PVRDGELWQWR--FHGKHTVPGQRR 451
           P R  E   WR  FHG H +  + R
Sbjct: 589 PCRPREQLTWRRNFHGPHRLAARSR 613


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
 Frame = -1

Query: 519 PVRDGELWQWR--FHGKHTVPGQRR 451
           P R  E   WR  FHG H +  + R
Sbjct: 481 PCRPREQLTWRRNFHGPHRLAARSR 505


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 506 ASCGNGASTVSTPSRDSEDLMASGFVP 426
           ASC    ST ST     +DL  +G  P
Sbjct: 97  ASCKYADSTSSTGVASPQDLSTNGAPP 123


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 506 ASCGNGASTVSTPSRDSEDLMASGFVP 426
           ASC    ST ST     +DL  +G  P
Sbjct: 97  ASCKYADSTSSTGVASPQDLSTNGAPP 123


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 506 ASCGNGASTVSTPSRDSEDLMASGFVP 426
           ASC    ST ST     +DL  +G  P
Sbjct: 97  ASCKYADSTSSTGVASPQDLSTNGAPP 123


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 506 ASCGNGASTVSTPSRDSEDLMASGFVP 426
           ASC    ST ST     +DL  +G  P
Sbjct: 97  ASCKYADSTSSTGVASPQDLSTNGAPP 123


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 506 ASCGNGASTVSTPSRDSEDLMASGFVP 426
           ASC    ST ST     +DL  +G  P
Sbjct: 97  ASCKYADSTSSTGVASPQDLSTNGAPP 123


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 506 ASCGNGASTVSTPSRDSEDLMASGFVP 426
           ASC    ST ST     +DL  +G  P
Sbjct: 53  ASCKYADSTSSTGVASPQDLSTNGAPP 79


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 506 ASCGNGASTVSTPSRDSEDLMASGFVP 426
           ASC    ST ST     +DL  +G  P
Sbjct: 97  ASCKYADSTSSTGVASPQDLSTNGAPP 123


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 506 ASCGNGASTVSTPSRDSEDLMASGFVP 426
           ASC    ST ST     +DL  +G  P
Sbjct: 97  ASCKYADSTSSTGVASPQDLSTNGAPP 123


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 506 ASCGNGASTVSTPSRDSEDLMASGFVP 426
           ASC    ST ST     +DL  +G  P
Sbjct: 97  ASCKYADSTSSTGVASPQDLSTNGAPP 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,424
Number of Sequences: 336
Number of extensions: 3036
Number of successful extensions: 30
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)