Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0129
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    25   2.7  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    25   2.7  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    23   6.3  
AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        23   8.3  

>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 280 FYSRNDNTDNLTYLHH*HYNEAHNCYNS 363
           FYSRN+N +N         NE HN YN+
Sbjct: 141 FYSRNNNNNN--------NNEHHNTYNA 160


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 280 FYSRNDNTDNLTYLHH*HYNEAHNCYNS 363
           FYSRN+N +N         NE HN YN+
Sbjct: 141 FYSRNNNNNN--------NNEHHNTYNA 160


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -2

Query: 421 CGTLRLLKL**NCYRCPVFSCYSSCGPRCSASDVST 314
           C  LRLL+    CYRC     Y     RC   D S+
Sbjct: 202 CCRLRLLERRRQCYRCYE---YGHTAARCHGKDRSS 234


>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 616 WRCSFKCKRCR 584
           W C  KCK CR
Sbjct: 80  WCCEVKCKLCR 90


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,976
Number of Sequences: 2352
Number of extensions: 12724
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)