Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0125
(716 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 2.9
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 3.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 8.8
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 8.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 8.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 8.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 8.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 8.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 8.8
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1
Query: 49 KASKLYNNRLNNMSRLIR 102
+A +LY++ L+N +RLIR
Sbjct: 20 EAKRLYDDLLSNYNRLIR 37
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 52 ASKLYNNRLNNMSRLIR 102
A +LY++ L+N +RLIR
Sbjct: 21 AKRLYDDLLSNYNRLIR 37
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 52 ASKLYNNRLNNMSRLIRIFISLLCVIKTATGL 147
A +LY++ L+N ++L+R ++ V++ L
Sbjct: 29 AKRLYDDLLSNYNKLVRPVVNTSDVLRVCIKL 60
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 52 ASKLYNNRLNNMSRLIRIFISLLCVIKTATGL 147
A +LY++ L+N ++L+R ++ V++ L
Sbjct: 29 AKRLYDDLLSNYNKLVRPVVNTSDVLRVCIKL 60
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 606 YQRISG*PKDKSLYVMTGTIDEVPKLPP 689
Y ++ P + L +T T+++VP +PP
Sbjct: 1090 YNQVGSGPLSEPL--LTQTMEDVPSIPP 1115
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 606 YQRISG*PKDKSLYVMTGTIDEVPKLPP 689
Y ++ P + L +T T+++VP +PP
Sbjct: 1086 YNQVGSGPLSEPL--LTQTMEDVPSIPP 1111
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 621 PISFDKFNFNFSSPNIRFFFIIV 553
P+ ++FN+ PN+ F I++
Sbjct: 650 PLDKPLYDFNYEGPNMLFKDILI 672
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 621 PISFDKFNFNFSSPNIRFFFIIV 553
P+ ++FN+ PN+ F I++
Sbjct: 650 PLDKPLYDFNYEGPNMLFKDILI 672
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 445 RRHQILSCLGN*N 407
RRH ILSC G N
Sbjct: 179 RRHLILSCQGRLN 191
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 445 RRHQILSCLGN*N 407
RRH ILSC G N
Sbjct: 179 RRHLILSCQGRLN 191
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 445 RRHQILSCLGN*N 407
RRH ILSC G N
Sbjct: 230 RRHLILSCQGRLN 242
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 445 RRHQILSCLGN*N 407
RRH ILSC G N
Sbjct: 179 RRHLILSCQGRLN 191
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/22 (31%), Positives = 17/22 (77%)
Frame = +1
Query: 52 ASKLYNNRLNNMSRLIRIFISL 117
A +LY++ L+N ++L+R +++
Sbjct: 25 AKRLYDDLLSNYNKLVRPVVNV 46
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,541
Number of Sequences: 438
Number of extensions: 4736
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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