Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0125
(716 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g14840.2 68416.m01875 leucine-rich repeat family protein / pr... 36 0.035
At1g28340.1 68414.m03481 leucine-rich repeat family protein cont... 34 0.082
At1g72250.1 68414.m08353 kinesin motor protein-related 33 0.19
At1g10620.1 68414.m01204 protein kinase family protein contains ... 32 0.44
At3g04690.1 68416.m00503 protein kinase family protein contains ... 30 1.3
At4g39110.1 68417.m05538 protein kinase family protein contains ... 30 1.8
At1g08590.1 68414.m00952 CLAVATA1 receptor kinase (CLV1) similar... 29 3.1
At3g06440.1 68416.m00745 galactosyltransferase family protein co... 28 5.4
At2g21480.1 68415.m02556 protein kinase family protein contains ... 28 5.4
At1g70150.1 68414.m08072 zinc finger (MYND type) family protein ... 28 5.4
At1g56120.1 68414.m06444 leucine-rich repeat family protein / pr... 28 5.4
At5g48740.1 68418.m06032 leucine-rich repeat family protein / pr... 28 7.1
At5g07300.1 68418.m00834 copine, putative strong similarity to B... 28 7.1
At1g72300.1 68414.m08358 leucine-rich repeat transmembrane prote... 28 7.1
At1g53430.1 68414.m06056 leucine-rich repeat family protein / pr... 28 7.1
At5g38560.1 68418.m04662 protein kinase family protein contains ... 27 9.4
At3g43300.1 68416.m04570 guanine nucleotide exchange family prot... 27 9.4
At2g40900.1 68415.m05047 nodulin MtN21 family protein similar to... 27 9.4
>At3g14840.2 68416.m01875 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain; contains 2 predicted transmembrane domains
Length = 988
Score = 35.5 bits (78), Expect = 0.035
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1
Query: 307 LYQTERYHHSTFGYDIPANKDGDYVLVLKFSEVYFSSPNM------KVFDVVLNGDHTIV 468
LY R + Y G+Y + L F+E+ F+ NM + FD+ + G V
Sbjct: 444 LYTQARLSAISLTYQALCLGKGNYTVNLHFAEIMFNEKNMYSNLGRRYFDIYVQGKRE-V 502
Query: 469 ADLDIFDKV-GRGVAHDEYIPYTIKNGKL 552
D +I D+ G G A + P + NGKL
Sbjct: 503 KDFNIVDEAKGVGKAVVKKFPVMVTNGKL 531
>At1g28340.1 68414.m03481 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to
receptor-like protein kinases
Length = 626
Score = 34.3 bits (75), Expect = 0.082
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 307 LYQTERYHHSTFGYDIPANKDGDYVLVLKFSEV--YFSSPNMKVFDVVLNGDHTIVADLD 480
L T+ T+ D+ N++ Y + L F+E+ ++ +VFDVV+NGD T D+D
Sbjct: 262 LVSTDDQPDLTYSLDVEPNRN--YSVWLHFAEIDNTITAEGKRVFDVVINGD-TFFEDVD 318
Query: 481 IFDKVG 498
I G
Sbjct: 319 IIKMSG 324
>At1g72250.1 68414.m08353 kinesin motor protein-related
Length = 1195
Score = 33.1 bits (72), Expect = 0.19
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 259 GKQLVMIGRVNPKDEIL-YQTERYHHSTFGYDIPANKDGDYVLVLKFSEVYFSSPNMKVF 435
G+ + V +DEIL YQT R F Y + GDY + L F+E+ F+
Sbjct: 200 GESITTDAVVGNEDEILLYQTARL--GNFAYKFQSLDPGDYFIDLHFAEIEFT------- 250
Query: 436 DVVLNGDHTIVADLDIFDKVG 498
G +++ LD+F +VG
Sbjct: 251 ----KGPPGVISGLDLFSQVG 267
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 523 YIHHEQHLFLLYQKYPNRLL*YGLHSRRHQIL 428
Y EQH FL+Y+ PN L Y LH + +L
Sbjct: 432 YCISEQHRFLIYEFVPNNTLDYHLHGKNLPVL 463
>At3g04690.1 68416.m00503 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 850
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 361 NKDGDYVLVLKFSEVYFSSPNMKVFDVVLNGDHTIVADLDIFDKVG 498
+K+ Y+L L F E S N KVF++ +N + T AD D +G
Sbjct: 300 DKNFTYILRLHFCEFQLSKINQKVFNIYIN-NRTAQADTTPADIIG 344
>At4g39110.1 68417.m05538 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 878
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 346 YDIPANKDGDYVLVLKFSEVYFSSPNMKVFDVVLNGDHTIVADLDIFDKVG 498
++ P+N +Y++ L F ++ S N F+V +NG T ++ LD+ G
Sbjct: 320 WNFPSNPSFNYLIRLHFCDIVSKSLNDLYFNVYING-KTAISGLDLSTVAG 369
>At1g08590.1 68414.m00952 CLAVATA1 receptor kinase (CLV1) similar to
receptor-like protein kinase (Ipomoea nil) (U77888)
Length = 1029
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 523 YIHHEQHLFLLYQKYPNRLL*YGLHSRRHQIL 428
Y+H+E+ + ++Y+ PN L LHS+ + L
Sbjct: 790 YVHNEREVMMVYEYMPNGNLGTALHSKDEKFL 821
>At3g06440.1 68416.m00745 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 619
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 577 IRGGKIKVEFIKGYRDNPKINLYM 648
+R GK+ V F+ G N K+NL M
Sbjct: 400 VRSGKVAVRFLIGLHTNEKVNLEM 423
>At2g21480.1 68415.m02556 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 871
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 346 YDIPANKDGDYVLVLKFSEVYFSSPNMKVFDVVLNGDHTIVADLDIFDKVG 498
++ P+N Y + L F ++ S N F+V +NG T ++ LD+ G
Sbjct: 319 WNFPSNPSFHYFIRLHFCDIISKSLNDLYFNVYING-KTAISGLDLSTVAG 368
>At1g70150.1 68414.m08072 zinc finger (MYND type) family protein
contains Pfam profile PF01753: MYND finger
Length = 387
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/87 (22%), Positives = 37/87 (42%)
Frame = +1
Query: 262 KQLVMIGRVNPKDEILYQTERYHHSTFGYDIPANKDGDYVLVLKFSEVYFSSPNMKVFDV 441
K+L +G V + + L+ R + G D+P + DG+ + + ++S K
Sbjct: 196 KELGQLG-VFAELQALFPGLRIYVDLIGPDVPQHMDGEMISLCRYSPCMGKECECKNSSK 254
Query: 442 VLNGDHTIVADLDIFDKVGRGVAHDEY 522
+LN + ++ RG HD Y
Sbjct: 255 ILNSGSKPALVSAVSLQLRRGFYHDRY 281
>At1g56120.1 68414.m06444 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1045
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 286 VNPKDEILYQTERYHHSTFGYDIPANKDGDYVLVLKFSEVYFSSPN 423
+N D L+Q+ R S+ Y ++G Y + L+F+EV N
Sbjct: 505 INTMDSELFQSARLSASSLRYYGLGLENGGYTVTLQFAEVQIEGSN 550
>At5g48740.1 68418.m06032 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 895
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +1
Query: 289 NPKDEILYQTERY--HHSTFGYDIPANKDGDYVLVLKFSEVYFSSPNMKVF--DVVLNGD 456
NP +L +T R + Y + + GDY ++L F+ + SP+ V D V D
Sbjct: 238 NPPASVL-KTARILARKESLSYTLSLHTPGDYYIILYFAGILSLSPSFSVTINDEVKQSD 296
Query: 457 HTIVA 471
+T+ +
Sbjct: 297 YTVTS 301
>At5g07300.1 68418.m00834 copine, putative strong similarity to
BONZAI1 [Arabidopsis thaliana] GI:15487382; contains
Pfam profile PF00168: C2 domain
Length = 586
Score = 27.9 bits (59), Expect = 7.1
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Frame = +1
Query: 229 QGRIGTASDYGKQLVMIGRVNPK----DEILYQTERYHHSTFG-YDIPANKDGDYVLVLK 393
+GR GT ++ + V++ +NPK I YQ E F YDI +LK
Sbjct: 76 KGRDGTLAELFRSEVVLNSLNPKWIKNFTIGYQFEIVQTLLFRVYDIDTQFQNSKEELLK 135
Query: 394 FSEVYF-SSPNMKVFDVVLNGDHTIVADLDIFDKVGRGVAHDEYIPYTIKNGKLYYNEEE 570
E F + +VV + TI L++ K GVA + NGKL + EE
Sbjct: 136 LDEQQFLGEATCTLSEVVTKSNRTIA--LELMRK--EGVAAQTQPQH---NGKLIVHAEE 188
Query: 571 S 573
S
Sbjct: 189 S 189
>At1g72300.1 68414.m08358 leucine-rich repeat transmembrane protein
kinase, putative similar to GI:3641252 from [Malus x
domestica] (Plant Mol. Biol. 40 (6), 945-957 (1999))
Length = 1095
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +1
Query: 283 RVNPKDEILYQTERYHHSTFGYDIPANKDGDYVLVLKFSEVYFSSPNMKVFDVVLNGDHT 462
RVNP D + E + ++ ++P D D LVL F + ++ +F+++ D+
Sbjct: 745 RVNPGDSENAELEINSNGSYS-EVPPGSDKDISLVLLFGNSRYEVKDLTIFELLKATDNF 803
Query: 463 IVADL 477
A++
Sbjct: 804 SQANI 808
>At1g53430.1 68414.m06056 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1030
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Frame = +1
Query: 286 VNPKDEILYQTERYHHSTFGYDIPANKDGDYVLVLKFSEVYFS------SPNMKVFDVVL 447
+N Y+T R + Y + G Y L L F+E+ FS S ++FD+ +
Sbjct: 462 INGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGRRIFDIYV 521
Query: 448 NGDHTIVADLDIFDKVG 498
G + + D +I ++ G
Sbjct: 522 QG-NLLERDFNIAERAG 537
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 523 YIHHEQHLFLLYQKYPNRLL*YGLHSRRHQILS 425
Y EQH L+Y PN L Y LH+ +++
Sbjct: 401 YCISEQHRLLVYDYVPNNTLHYHLHAPGRPVMT 433
>At3g43300.1 68416.m04570 guanine nucleotide exchange family protein
similar to SP|Q9Y6D5 Brefeldin A-inhibited guanine
nucleotide-exchange protein 2 {Homo sapiens}; contains
Pfam profile PF01369: Sec7 domain
Length = 1756
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 382 LVLKFSEVYFSSPNMKVFDVVLNGDHTIVA 471
LVLK + F + N+K+FD L+ H ++A
Sbjct: 106 LVLKPLRLAFETKNLKIFDAALDCLHKLIA 135
>At2g40900.1 68415.m05047 nodulin MtN21 family protein similar to
MtN21 [Medicago truncatula] GI:2598575; contains Pfam
profile PF00892: Integral membrane protein
Length = 394
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 113 LYYVSLKLLRD*VKSSTP*MPEVLLIQTSTVFIMKKIHYRDELALHQIM 259
LYY+ LKL S+ + + I +T+F M+K+ R L ++M
Sbjct: 91 LYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVEMRKVRCLVKVM 139
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,262,998
Number of Sequences: 28952
Number of extensions: 330303
Number of successful extensions: 798
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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