Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0121
         (659 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D574A8 Cluster: PREDICTED: similar to CG10939-PA...    62   9e-09
UniRef50_Q7K5M6 Cluster: GH04176p; n=2; Sophophora|Rep: GH04176p...    58   2e-07
UniRef50_Q7PV46 Cluster: ENSANGP00000015778; n=2; Culicidae|Rep:...    56   6e-07
UniRef50_UPI00003C0CF3 Cluster: PREDICTED: similar to SRY intera...    52   1e-05
UniRef50_A6LK64 Cluster: Putative uncharacterized protein precur...    36   1.1  
UniRef50_Q4RF98 Cluster: Chromosome 14 SCAF15120, whole genome s...    33   8.0  

>UniRef50_UPI0000D574A8 Cluster: PREDICTED: similar to CG10939-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG10939-PA - Tribolium castaneum
          Length = 162

 Score = 62.5 bits (145), Expect = 9e-09
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = -2

Query: 658 LNLQMTAAEMRAHLAAKKKFDPKKVPMDLRSKFDIVKKL 542
           LNL MTAAE+RA LA+KKKFDPKK  MD + KFDIV+KL
Sbjct: 124 LNLSMTAAELRAKLASKKKFDPKKESMDFKQKFDIVQKL 162


>UniRef50_Q7K5M6 Cluster: GH04176p; n=2; Sophophora|Rep: GH04176p -
           Drosophila melanogaster (Fruit fly)
          Length = 296

 Score = 57.6 bits (133), Expect = 2e-07
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = -2

Query: 658 LNLQMTAAEMRAHLAAKKKFDPKKVPMDLRSKFDIVKKL 542
           L+L MTAAEMRA LA+KKK+DPK   +DL+ KFDI++KL
Sbjct: 258 LHLPMTAAEMRAKLASKKKYDPKNESVDLKKKFDIIQKL 296


>UniRef50_Q7PV46 Cluster: ENSANGP00000015778; n=2; Culicidae|Rep:
           ENSANGP00000015778 - Anopheles gambiae str. PEST
          Length = 267

 Score = 56.4 bits (130), Expect = 6e-07
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = -2

Query: 658 LNLQMTAAEMRAHLAAKKKFDPKKVPMDLRSKFDIVKKL 542
           LNL MTAAEMRA LAA+KK+DPK    DLR K++I++K+
Sbjct: 229 LNLPMTAAEMRAQLAARKKYDPKSEVCDLRKKYEIIQKM 267


>UniRef50_UPI00003C0CF3 Cluster: PREDICTED: similar to SRY
           interacting protein 1 CG10939-PA; n=2; Apocrita|Rep:
           PREDICTED: similar to SRY interacting protein 1
           CG10939-PA - Apis mellifera
          Length = 260

 Score = 52.0 bits (119), Expect = 1e-05
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = -2

Query: 658 LNLQMTAAEMRAHLAAKKKFDPKKVPMDLRSKFDIVKKL 542
           LNL+M+A E+RA LA +KK+DPKK  +  + KFDIV+KL
Sbjct: 222 LNLKMSAKELRAQLALRKKYDPKKESIGFKDKFDIVQKL 260


>UniRef50_A6LK64 Cluster: Putative uncharacterized protein
           precursor; n=1; Thermosipho melanesiensis BI429|Rep:
           Putative uncharacterized protein precursor - Thermosipho
           melanesiensis BI429
          Length = 588

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = +1

Query: 148 NYKFIITLTIIR-SLAE*VLMYITQINGNFSR-KLNYYFTLM*X*IHNKLYDTIRSR-VR 318
           N+  I  L++ + SL+  V+ YI   NGN+ R   N+Y+T       N  Y  +  + V+
Sbjct: 39  NFVVISILSVEKESLSREVISYIKNENGNYIRYNGNFYYTS-----DNNKYRLVGEKFVK 93

Query: 319 DENGPHLYS 345
           DENGP++Y+
Sbjct: 94  DENGPYVYA 102


>UniRef50_Q4RF98 Cluster: Chromosome 14 SCAF15120, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 14
           SCAF15120, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 1133

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 648 R*PRPRCEHISPPRRSSTLRKCRWTLGPSL 559
           R P P+     PPR S+   +CRW   PSL
Sbjct: 275 RGPGPKATRPRPPRTSAASARCRWATSPSL 304


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,470,687
Number of Sequences: 1657284
Number of extensions: 9234140
Number of successful extensions: 24097
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24078
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)