Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0121
         (659 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127042-1|BAC86800.1| 1032|Homo sapiens protein ( Homo sapiens ...    30   6.4  
AB210042-1|BAE06124.1| 1090|Homo sapiens SDCCAG33 variant protei...    30   6.4  

>AK127042-1|BAC86800.1| 1032|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45099 fis, clone BRAWH3031710, highly  similar
           to Homo sapiens serologically defined colon cancer
           antigen 33 (SDCCAG33). ).
          Length = 1032

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = +1

Query: 451 TRPVWATARPGTTSNNTAESMHTAHSSRTITVSSRCQTWT*GPSALS*GRTSSW 612
           T PV +T  P T++ +T+ S  T+HSS T T SS    W     A +  +TSS+
Sbjct: 117 TCPV-STTGPTTSTPSTSCSSSTSHSSTTSTSSSSGYDWHQAALAKTLQQTSSY 169


>AB210042-1|BAE06124.1| 1090|Homo sapiens SDCCAG33 variant protein
           protein.
          Length = 1090

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = +1

Query: 451 TRPVWATARPGTTSNNTAESMHTAHSSRTITVSSRCQTWT*GPSALS*GRTSSW 612
           T PV +T  P T++ +T+ S  T+HSS T T SS    W     A +  +TSS+
Sbjct: 175 TCPV-STTGPTTSTPSTSCSSSTSHSSTTSTSSSSGYDWHQAALAKTLQQTSSY 227


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,428,060
Number of Sequences: 237096
Number of extensions: 1390017
Number of successful extensions: 3424
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3409
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)