Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0117
         (443 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IFN0 Cluster: Putative uncharacterized protein PFD111...    33   2.8  
UniRef50_Q6F1H0 Cluster: Putative uncharacterized protein; n=1; ...    32   6.4  
UniRef50_Q8I5E1 Cluster: Putative uncharacterized protein; n=4; ...    32   6.4  
UniRef50_A5K077 Cluster: Putative uncharacterized protein; n=1; ...    32   6.4  
UniRef50_Q9EMF0 Cluster: AMV256; n=1; Amsacta moorei entomopoxvi...    31   8.5  
UniRef50_Q6NM31 Cluster: At1g55240; n=3; rosids|Rep: At1g55240 -...    31   8.5  

>UniRef50_Q8IFN0 Cluster: Putative uncharacterized protein PFD1115c;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFD1115c - Plasmodium falciparum (isolate 3D7)
          Length = 1612

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = -2

Query: 385 KECTMLIFFSNNA*KIL*INKENITHTTIYLTQHIHKNI 269
           K+C+  +FF N   K L +NK+N+ H T    +HI KNI
Sbjct: 215 KDCSYSVFFYNLFIKGLYLNKQNLEHAT--EKEHIQKNI 251


>UniRef50_Q6F1H0 Cluster: Putative uncharacterized protein; n=1;
           Mesoplasma florum|Rep: Putative uncharacterized protein
           - Mesoplasma florum (Acholeplasma florum)
          Length = 483

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
 Frame = +1

Query: 85  NYKFTHYGSIVKHYDISILSQYSPKLHYRSIILK---TNNINL-FSIRPQTLNNNKSFPI 252
           +Y+F  Y  ++K  DISI  +Y   + Y++II K    N +NL F I+     +      
Sbjct: 139 DYEFKDYRPVIKQLDISI--KYLSLIEYKNIIKKLKIKNLLNLDFEIKKSINFDVNQKNT 196

Query: 253 DSKQRIYFY 279
            SK+  YFY
Sbjct: 197 KSKKDFYFY 205


>UniRef50_Q8I5E1 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 771

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = -2

Query: 394 LIEKECTMLIFFSNNA*KIL*INKENITHTTIYLTQHIHKN 272
           L++ E  +LI+ +NN  KIL   K+N  H    L++HIH+N
Sbjct: 536 LLDYESKLLIYENNNEIKIL---KKNEDHLRKLLSKHIHRN 573


>UniRef50_A5K077 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 950

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = -2

Query: 394 LIEKECTMLIFFSNNA*KIL*INKENITHTTIYLTQHIHKN 272
           L++ E  +LI+ +NN  KIL   K+N  H    L++HIH+N
Sbjct: 681 LLDYESKLLIYENNNEIKIL---KKNEDHLRKLLSKHIHRN 718


>UniRef50_Q9EMF0 Cluster: AMV256; n=1; Amsacta moorei entomopoxvirus
           'L'|Rep: AMV256 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 609

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 18/63 (28%), Positives = 36/63 (57%)
 Frame = +1

Query: 85  NYKFTHYGSIVKHYDISILSQYSPKLHYRSIILKTNNINLFSIRPQTLNNNKSFPIDSKQ 264
           NYK  H   +++H  +S+L  Y+ +L + +    +NNIN++      +++NK   ID+  
Sbjct: 40  NYKLIH---LIEHILVSMLIVYTGELSFWNGYTNSNNINIYYNNIMNISHNKI--IDAIL 94

Query: 265 RIY 273
           R++
Sbjct: 95  RLF 97


>UniRef50_Q6NM31 Cluster: At1g55240; n=3; rosids|Rep: At1g55240 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 311

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +1

Query: 190 NNINLFSIRPQTLNNNKSFPIDSKQRIYFYVCVVSN 297
           NNI LF + P T +++  FPI   + +  Y+ ++S+
Sbjct: 24  NNIKLFCLHPNTFSSSTWFPISKLRHLELYLIMLSS 59


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,231,328
Number of Sequences: 1657284
Number of extensions: 7307108
Number of successful extensions: 15142
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15132
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)