Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0117
         (443 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.56 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.56 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    24   0.74 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   0.74 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   2.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   2.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   2.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   3.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   3.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   3.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   4.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.2  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   6.9  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 307 TTIYLTQHIHKNIFFVYC 254
           TT+++T  I KN+   YC
Sbjct: 82  TTLFMTSQIKKNVTRAYC 99


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 307 TTIYLTQHIHKNIFFVYC 254
           TT+++T  I KN+   YC
Sbjct: 82  TTLFMTSQIKKNVTRAYC 99


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 0.74
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -3

Query: 387 RRSAQC*YFFQIMHKRYFKSIKKTLHTLPFI*HNTYI 277
           +R +QC Y + ++  RY  + + + H+      NTYI
Sbjct: 121 KRWSQCMYMYFLLGFRYLVNDELSAHSKEIRGENTYI 157


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 0.74
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -3

Query: 387 RRSAQC*YFFQIMHKRYFKSIKKTLHTLPFI*HNTYI 277
           +R +QC Y + ++  RY  + + + H+      NTYI
Sbjct: 435 KRWSQCMYMYFLLGFRYLVNDELSAHSKEIRGENTYI 471


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 88  YKFTHYGSIVKHYDISILSQYSPK 159
           YK +H+ SI  +YD       SP+
Sbjct: 17  YKLSHFLSITPNYDFENFVIISPR 40


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +1

Query: 190 NNINLFSIRPQTLNNNKSFPIDSKQRIYFYVC 285
           N + + S   +TLN+    P+  + ++Y   C
Sbjct: 98  NAVKILSKIDETLNSKPLKPVKIRTKVYLVYC 129


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +1

Query: 190 NNINLFSIRPQTLNNNKSFPIDSKQRIYFYVC 285
           N + + S   +TLN+    P+  + ++Y   C
Sbjct: 94  NAVKILSKIDETLNSKPLKPVKIRTKVYLVYC 125


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/35 (22%), Positives = 20/35 (57%)
 Frame = +1

Query: 133 SILSQYSPKLHYRSIILKTNNINLFSIRPQTLNNN 237
           S++  Y      ++++    +I ++SI+P+  N+N
Sbjct: 124 SMVMFYKRSNDLKTLLSNLESIQIYSIKPKERNSN 158


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 303 PFI*HNTYIKIYSLFTVNW 247
           P I HN  +  YSL  ++W
Sbjct: 168 PIIFHNLTLITYSLCVISW 186


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/35 (22%), Positives = 20/35 (57%)
 Frame = +1

Query: 133 SILSQYSPKLHYRSIILKTNNINLFSIRPQTLNNN 237
           S++  Y      ++++    +I ++SI+P+  N+N
Sbjct: 80  SMVMFYKRSNDLKTLLSNLESIQIYSIKPKERNSN 114


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 303 PFI*HNTYIKIYSLFTVNW 247
           P I HN  +  YSL  ++W
Sbjct: 168 PIIFHNLTLITYSLCVISW 186


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 2   IDICILSLGDFKSTSGPAVFEI 67
           I I  LSL DFK T G   ++I
Sbjct: 410 IAIVDLSLDDFKGTCGRDKYDI 431


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +1

Query: 55  SIRDSTIIN*NYKFTHYGSIVKHYDISILSQYSPKL 162
           S++D   IN   K+ +   I   YD     +Y P L
Sbjct: 8   SLKDIVFINPLVKYLNIFFITPWYDFPTNQKYYPSL 43


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -3

Query: 135 RNVIVFDNRTIMCEFIISINYSRISNTAGPLVLLKSPKL 19
           +N++ F    + C F    +Y+ ++     L LL SP++
Sbjct: 77  QNILTF----LSCRFHQGASYNTLNTCRSALALLLSPEV 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,352
Number of Sequences: 336
Number of extensions: 2228
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)