Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0117
         (443 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1263 + 25279899-25279985,25280263-25282372,25282700-252827...    28   2.9  
07_03_0485 + 18630758-18630786,18631331-18631458,18631490-186316...    27   9.0  

>07_03_1263 +
           25279899-25279985,25280263-25282372,25282700-25282793,
           25283178-25283314,25283419-25283454,25283602-25283642,
           25284036-25284125,25284229-25284284,25284947-25285030,
           25285072-25285150
          Length = 937

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 212 IENRLILFVFNIIDL*CSFGEYCDNI 135
           I   L+LF + II L C F  +CDN+
Sbjct: 868 ISTSLLLFFYLIIQLRCMFLVFCDNL 893


>07_03_0485 +
           18630758-18630786,18631331-18631458,18631490-18631627,
           18632077-18632273
          Length = 163

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 103 YGSIVKHYDISILSQYSPKLHYRSIILKTNNI 198
           Y S V  Y +  L     +LH++ I+ KTNNI
Sbjct: 133 YNSWVTIYHV--LENKQRRLHFKGIVFKTNNI 162


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,925,839
Number of Sequences: 37544
Number of extensions: 163547
Number of successful extensions: 220
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)