Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0116
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    27   0.43 
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    26   1.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   3.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   4.0  
AJ420785-4|CAD12784.1|  395|Anopheles gambiae serpin protein.          24   5.3  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   7.0  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    23   7.0  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 12/61 (19%)
 Frame = +3

Query: 528 PGQEGERAPAARGRLQGEAHVRLLRG------------EAASGLPAREVERGAPSRPEAH 671
           PGQ+G    A    L+G+   R  +G              A GLP R+ E+G P RP   
Sbjct: 505 PGQKGNAGMAGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLPGRDGEKGEPGRPGLP 564

Query: 672 G 674
           G
Sbjct: 565 G 565



 Score = 27.5 bits (58), Expect = 0.43
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 11/64 (17%)
 Frame = +3

Query: 516 GAPH-PGQEGERAPAARGRLQGEAHVRLLRGEAAS-------GLPAREVER---GAPSRP 662
           GAP  PG++GE+    R  L G    R L+GE          G+   + ER   G P RP
Sbjct: 544 GAPGLPGRDGEKGEPGRPGLPGAKGERGLKGELGGRCTDCRPGMKGDKGERGYAGEPGRP 603

Query: 663 EAHG 674
            A G
Sbjct: 604 GASG 607



 Score = 23.4 bits (48), Expect = 7.0
 Identities = 20/73 (27%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
 Frame = +3

Query: 465 GGRNRGREDGAVARAGTGAPHPGQ--EGERAPAARGRLQGEAHVRLLRGEAAS-GLPARE 635
           G R      G     G  A HP    +G++       L+G    +   GE    G P R 
Sbjct: 199 GPRGYAGIPGTKGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQ---GEVGPRGFPGRP 255

Query: 636 VERGAPSRPEAHG 674
            E+G P  P   G
Sbjct: 256 GEKGVPGTPGVRG 268


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -1

Query: 336 QSGVIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRV 229
           +SG I VLH +  L    CC  HT     R+    V
Sbjct: 575 RSGFILVLHGVPGLQQLCCCIRHTPPAIARNVGSSV 610


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 20/49 (40%), Positives = 21/49 (42%)
 Frame = +3

Query: 510  GTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPS 656
            G G    G  G  AP A G + G A V        SGLPA     GAPS
Sbjct: 3200 GAGLAMVGAGGSTAPGAGG-VPGVAVV------PGSGLPAAAASGGAPS 3241


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 16/49 (32%), Positives = 18/49 (36%)
 Frame = +3

Query: 531 GQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGR 677
           G  G   PA    L G        GE     P  + E+G P RP   GR
Sbjct: 512 GLPGLPGPAGLNGLPGMKGDMGPLGEKGDACPVVKGEKGLPGRPGKTGR 560


>AJ420785-4|CAD12784.1|  395|Anopheles gambiae serpin protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 28  IKYTINNVSRVALRSGASKQTACTALVARGSASDVA 135
           +K  +++    AL  G+S+QTA    + +   SDVA
Sbjct: 352 LKVRLDHPFLYALMMGSSRQTAFVGRLVKPDQSDVA 387


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 553 LQLEAAYRERLMYAYSEVKRRLDYQLEKSNVER 651
           + L   YR + M  YS   + LD++L+ S   R
Sbjct: 170 IPLSDTYRNQSMTYYSSEVQSLDFELDTSGSTR 202


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 115 PVRLVLCTRSVCSHLNAKP 59
           P  +V CTR+VC+  N  P
Sbjct: 117 PSMIVKCTRNVCTGRNEVP 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.132    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,291
Number of Sequences: 2352
Number of extensions: 15279
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)