Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0115
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   4.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   5.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.6  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 210 CDLEITVSPKPL 245
           CDL++T +P PL
Sbjct: 53  CDLDVTGTPPPL 64


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 478  PFGNYFNIFFYLTDYRW 428
            P   YF I  Y T++ W
Sbjct: 1393 PQSGYFKIVCYFTNWAW 1409


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 32  RNNRI*YF*KLFETETRNFTS 94
           R+N I  F K+ +   RNFT+
Sbjct: 288 RDNEIKMFVKIVDASCRNFTA 308


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 201 TFNM*IIFILCHNF 160
           TFN+ ++F+LC  +
Sbjct: 65  TFNVHLLFLLCSGY 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,169
Number of Sequences: 336
Number of extensions: 2287
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)