Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0114
         (723 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1086 + 8890806-8890865,8890970-8891055,8891366-8891440,889...    29   3.7  
07_01_1132 + 10531922-10532136,10532307-10532433,10532945-105331...    28   6.5  

>06_01_1086 +
           8890806-8890865,8890970-8891055,8891366-8891440,
           8892780-8892921,8893304-8893490,8893944-8894425,
           8894595-8894975,8895056-8895100,8896486-8896639,
           8897750-8897895,8898016-8898099
          Length = 613

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +3

Query: 318 TASYIRGSLCALLRT*YSYLIHS 386
           TASYIRG++C+ LRT  S++I S
Sbjct: 61  TASYIRGTVCSCLRT--SWIIDS 81


>07_01_1132 +
           10531922-10532136,10532307-10532433,10532945-10533100,
           10533755-10533847,10534010-10534090,10534205-10534276,
           10534608-10534676,10534764-10534874,10535039-10535089
          Length = 324

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 311 CFLSHFFSLYLMNLCV 264
           CFLSHF  LYL  +C+
Sbjct: 92  CFLSHFHVLYLREICL 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,925,802
Number of Sequences: 37544
Number of extensions: 236468
Number of successful extensions: 375
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)