Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0111
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5JZ31 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  
UniRef50_A7TTV9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  
UniRef50_Q16VD3 Cluster: Lingerer; n=5; Aedes aegypti|Rep: Linge...    33   7.0  

>UniRef50_A5JZ31 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 8834

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 18/68 (26%), Positives = 35/68 (51%)
 Frame = -1

Query: 250  YSSADRSVYKFITFYNTNRTIFLKKKMEFSLPKTILKHNKNNIKCSN*IYINKLK*SGRY 71
            +S  ++ +YK     +T  ++FL KK +F L    ++  K NI     + IN+++    Y
Sbjct: 6878 HSYLEKIIYKLQENSDTISSVFLLKKFKFDLKSKHIRTVKENIDDGMNLLINRVRQMCNY 6937

Query: 70   CENNIRIV 47
              NN+ ++
Sbjct: 6938 RNNNLSLL 6945


>UniRef50_A7TTV9 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 236

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +2

Query: 53  SYIILTISSRLF*FVNINLVRTLNIIFVMFQYGFRQTKFHFFFQKNCSVCVIKSYKFI 226
           S   LT+S  LF F+N ++   + I++ +F Y F    F + + K CS+  + ++  +
Sbjct: 170 SLSFLTLSISLFQFINTSISNCIYILYFIFSY-FHIFIFTYIYDKLCSIQKVSNHSIL 226


>UniRef50_Q16VD3 Cluster: Lingerer; n=5; Aedes aegypti|Rep: Lingerer
           - Aedes aegypti (Yellowfever mosquito)
          Length = 1250

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 649 SEQTSRSGTRTV-KFTPALPILFNVLFTTSRNTNTSYIYMMQPFNKTT 509
           +  TS  G  TV +  P LP+  NV   +S NTNT Y+    P ++T+
Sbjct: 782 NNSTSSVGVSTVNQSNPNLPVNNNVSNNSSSNTNTGYLSSQYPVSQTS 829


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,357,451
Number of Sequences: 1657284
Number of extensions: 11992490
Number of successful extensions: 24571
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24565
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)