Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0111
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   4.1  
DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted ...    23   7.2  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.2  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        23   9.5  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        23   9.5  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        23   9.5  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        23   9.5  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   9.5  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 95  VNINLVRTLNIIFVMFQYGFRQ-TKFHFFFQKNCSVCV 205
           +++ L+ T  ++ + F    R  T+   FFQKNC  C+
Sbjct: 6   ISVTLLVTTYLLSLAFGQSSRVVTQSKCFFQKNCIECL 43



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +1

Query: 535 CKCRRC*CFEKW 570
           C C  C CF+ W
Sbjct: 578 CTCGTCSCFDSW 589


>DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
 Frame = +2

Query: 590 YRKCRCE--LYRSSPGSRCLLASFVQIP 667
           Y +C C     R  PG RC+   F Q P
Sbjct: 84  YAECYCASGFVREYPGGRCIPKLFCQRP 111


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +1

Query: 415 KECASPCPRSAICLRKAAD--LLMVRPVSY 498
           K C  PCP +  C++ A D  + +  PV Y
Sbjct: 774 KRC--PCPNNGACMQMAGDTVICLECPVGY 801


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +1

Query: 535 CKCRRC*CFEKW 570
           C C  C CF+ W
Sbjct: 2   CTCGTCSCFDSW 13


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +1

Query: 535 CKCRRC*CFEKW 570
           C C  C CF+ W
Sbjct: 2   CTCGTCSCFDSW 13


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +1

Query: 535 CKCRRC*CFEKW 570
           C C  C CF+ W
Sbjct: 2   CTCGTCSCFDSW 13


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +1

Query: 535 CKCRRC*CFEKW 570
           C C  C CF+ W
Sbjct: 2   CTCGTCSCFDSW 13


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 415 KECASPCPRSAICLRKAAD 471
           ++C SP  R   C+R  AD
Sbjct: 401 RDCQSPVDRQQACIRCGAD 419


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,034
Number of Sequences: 2352
Number of extensions: 12808
Number of successful extensions: 50
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)