Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0110
(367 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori... 57 1e-07
UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera... 39 0.032
UniRef50_UPI0000D9BD72 Cluster: PREDICTED: hypothetical protein;... 36 0.30
UniRef50_Q5AFA7 Cluster: Putative uncharacterized protein; n=1; ... 34 0.92
UniRef50_A6GKA1 Cluster: Putative regulatory protein; n=1; Plesi... 33 1.6
UniRef50_Q016K6 Cluster: Chromosome 06 contig 1, DNA sequence; n... 33 1.6
UniRef50_Q88RX4 Cluster: Putative uncharacterized protein lp_368... 33 2.1
UniRef50_A6C482 Cluster: Putative uncharacterized protein; n=1; ... 33 2.1
UniRef50_A7BBG3 Cluster: Putative uncharacterized protein; n=1; ... 32 2.8
UniRef50_Q2JF04 Cluster: Twin-arginine translocation pathway sig... 32 3.7
UniRef50_Q8PKL3 Cluster: Histidine kinase-response regulator hyb... 31 4.9
UniRef50_Q5H1J8 Cluster: RNA polymerase sigma factor; n=6; Xanth... 31 4.9
UniRef50_UPI000023DBE0 Cluster: hypothetical protein FG00939.1; ... 31 6.5
UniRef50_UPI00001D976F Cluster: ORF25; n=1; Fowl adenovirus 9|Re... 31 6.5
UniRef50_A5K9X5 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_Q9CUU9 Cluster: Adult male hippocampus cDNA, RIKEN full... 31 8.6
UniRef50_A6W7N9 Cluster: Sucraseferredoxin family protein; n=1; ... 31 8.6
UniRef50_A4Z032 Cluster: Putative uncharacterized protein; n=1; ... 31 8.6
UniRef50_A2WEI9 Cluster: Mannose-1-phosphate guanylyltransferase... 31 8.6
UniRef50_Q9LX64 Cluster: Putative uncharacterized protein F4M19_... 31 8.6
UniRef50_A2YBB8 Cluster: Putative uncharacterized protein; n=2; ... 31 8.6
UniRef50_O61673 Cluster: Potassium channel modulatory factor; n=... 31 8.6
>UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori|Rep:
Reverse transcriptase - Bombyx mori (Silk moth)
Length = 1076
Score = 56.8 bits (131), Expect = 1e-07
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = -1
Query: 169 RQSVLEA*SRRLADPSAGLRTVEAICPVLAEWVGRDRGSLTSGYLCRLTRH 17
R+SVLE+ SRRLA+P+ GLRTVEA+ PV +WV R G LT + LT H
Sbjct: 909 RRSVLESWSRRLANPTWGLRTVEAVYPVFDDWVNRGEGRLTFRLVQVLTGH 959
>UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera|Rep:
Reverse transcriptase - Papilio xuthus
Length = 1053
Score = 38.7 bits (86), Expect = 0.032
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 169 RQSVLEA*SRRLADPSAGLRTVEAICPVLAEWVGRDRGSLT 47
R+ + RRL AG RT+ AICPV W+ R G++T
Sbjct: 886 REEAVSKWQRRLRQTRAGARTIGAICPVFMAWLRRRHGAVT 926
>UniRef50_UPI0000D9BD72 Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 195
Score = 35.5 bits (78), Expect = 0.30
Identities = 27/68 (39%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 2 PGCRKMSCESAQVAGGETSA-VAAHPLRENRADRLDGTEAGRRVRQTTRSRLQHGLPILE 178
PGCRK SA AGG S A R+ R R G+ +GRR R HG L
Sbjct: 125 PGCRKRGRGSAGPAGGSGSGDGACGAWRDRRGARRAGSSSGRR---RLRCPPDHGTEHLH 181
Query: 179 PPRS--GC 196
PP + GC
Sbjct: 182 PPPAWGGC 189
>UniRef50_Q5AFA7 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 175
Score = 33.9 bits (74), Expect = 0.92
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 279 EALEHTLTSLVGPATAQSPTRRRTLAQVQPERGGSNIGSPCWRRDL 142
E L H S G T Q P+ R+ L QV+ NI SP W ++L
Sbjct: 2 EKLRHKFGSKKGENTKQWPSMRKKLTQVKKLMSQRNIMSPTWPKNL 47
>UniRef50_A6GKA1 Cluster: Putative regulatory protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative regulatory
protein - Plesiocystis pacifica SIR-1
Length = 929
Score = 33.1 bits (72), Expect = 1.6
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 50 ETSAVAAHPLRENRADRLDGTEAGRRVRQTTRSRLQHGLPILEPPRSGCTCARV-RRLVG 226
E AVA +R+ R L AG+R R + R L+H LPILE R R+ +L+
Sbjct: 869 EHVAVAETEVRKARL-LLAARPAGQRSRDSARKLLEHALPILERERPNSDTIRLAAKLLK 927
Query: 227 DC 232
+C
Sbjct: 928 NC 929
>UniRef50_Q016K6 Cluster: Chromosome 06 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 06 contig 1, DNA
sequence - Ostreococcus tauri
Length = 263
Score = 33.1 bits (72), Expect = 1.6
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +2
Query: 23 CESAQVAGGETSAVAAHPLRENRADRLDGTEAGRRVRQTTRSRLQHG 163
CE A G V H E +D +G E GR + TR RLQ G
Sbjct: 199 CEEAGSQGARQERVCCH--HEGYSDCEEGCEEGRGAEEATRGRLQEG 243
>UniRef50_Q88RX4 Cluster: Putative uncharacterized protein lp_3683;
n=1; Lactobacillus plantarum|Rep: Putative
uncharacterized protein lp_3683 - Lactobacillus
plantarum
Length = 322
Score = 32.7 bits (71), Expect = 2.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 42 PEVRLPRSRPTHSARTGQIASTVRRPADGSAK 137
P V+ P+S PT A+T Q ++ +PA AK
Sbjct: 88 PTVQTPKSTPTRQAKTSQATTSAAKPATSKAK 119
>UniRef50_A6C482 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 152
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -1
Query: 145 SRRLADPSAGLRTVEAICPVLAEWVGRDRGSLTSGY 38
S++ ADPSAGL T+EAI + +G D L GY
Sbjct: 103 SKQFADPSAGLATIEAIY-IAYHLMGLDTTGLLEGY 137
>UniRef50_A7BBG3 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 347
Score = 32.3 bits (70), Expect = 2.8
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -1
Query: 133 ADPSAGLRTVEAICPVLAEWVGRDRGSLTSGYLCRLTRHFPAA 5
A P TV I +A+W+GR+R G+ RL R FPAA
Sbjct: 145 AYPQYAASTVTTINDAVAQWIGRNR----DGFELRLHRSFPAA 183
>UniRef50_Q2JF04 Cluster: Twin-arginine translocation pathway
signal; n=3; Frankia|Rep: Twin-arginine translocation
pathway signal - Frankia sp. (strain CcI3)
Length = 880
Score = 31.9 bits (69), Expect = 3.7
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 57 PRS-RPTHSARTGQIASTVRRPADGSAKRRDHASSTD 164
PRS RP+ SAR G +AS V DG++ RR + D
Sbjct: 66 PRSARPSRSARPGNVASGVTYADDGASARRSPGGTGD 102
>UniRef50_Q8PKL3 Cluster: Histidine kinase-response regulator hybrid
protein; n=6; Xanthomonas|Rep: Histidine kinase-response
regulator hybrid protein - Xanthomonas axonopodis pv.
citri
Length = 509
Score = 31.5 bits (68), Expect = 4.9
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +1
Query: 154 PARTADIGAPALRLHLR*GAPPRRRLCCGRSNQRRQRV 267
PA AD AP H R +P RRR GR+ QRRQ +
Sbjct: 219 PAPRAD--APRWLAHARRASPYRRRAADGRATQRRQSI 254
>UniRef50_Q5H1J8 Cluster: RNA polymerase sigma factor; n=6;
Xanthomonas|Rep: RNA polymerase sigma factor -
Xanthomonas oryzae pv. oryzae
Length = 363
Score = 31.5 bits (68), Expect = 4.9
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = +2
Query: 68 AHPLRENRADRLDGTEAGRRVRQTTRSRLQHGLPILEPPRS 190
A LR N A L+ TE R +TR R+ H L LEPPRS
Sbjct: 284 AGELRANDASPLERTE-----RASTRRRIDHCLAELEPPRS 319
>UniRef50_UPI000023DBE0 Cluster: hypothetical protein FG00939.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00939.1 - Gibberella zeae PH-1
Length = 874
Score = 31.1 bits (67), Expect = 6.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 48 VRLPRSRPTHSARTGQIASTVRRPADGSAKRRDHASSTDCRY 173
+R+PR+RP S+R + S+ R A+ R H S+ Y
Sbjct: 15 LRVPRARPHRSSRNSSVRSSARSSANYEEPRHRHPSTGPTSY 56
>UniRef50_UPI00001D976F Cluster: ORF25; n=1; Fowl adenovirus 9|Rep:
ORF25 - Fowl adenovirus 9
Length = 169
Score = 31.1 bits (67), Expect = 6.5
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 18 CLVSLHR*PEVRLPRSRP-THSARTGQIASTVRRPADGSAKRRDHASSTDC 167
C++ P P S+P T SARTG T PA SA D S DC
Sbjct: 12 CVIIPRADPLPITPASKPATDSARTGASVITTHLPASPSATPCDEILSEDC 62
>UniRef50_A5K9X5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1378
Score = 31.1 bits (67), Expect = 6.5
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 ITPPARTADIGAPALR--LHLR*GAPPRRRLCCGRSNQRRQRVFQSFSVLQISGFGSPFM 318
IT +TA G+P R HLR P R L + N+R ++ ++F + +G G FM
Sbjct: 570 ITQTMQTAPTGSPPTRGAPHLRAYPPVERILYVNKYNERSGKLIRTFFLHCPTGTGKTFM 629
Query: 319 F 321
+
Sbjct: 630 Y 630
>UniRef50_Q9CUU9 Cluster: Adult male hippocampus cDNA, RIKEN
full-length enriched library, clone:2900093E15
product:hypothetical protein, full insert sequence; n=2;
Murinae|Rep: Adult male hippocampus cDNA, RIKEN
full-length enriched library, clone:2900093E15
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 127
Score = 30.7 bits (66), Expect = 8.6
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 140 TRSRLQHGLPILEPPRSGCTCARVRRLVGDCAVAGPTRDVNVCSRAS 280
+R R + P+L PP C C R G C+V P V AS
Sbjct: 36 SRLRFRRSPPLLPPPLLRCLCFLCSRCRGGCSVVPPVPAAAVVPAAS 82
>UniRef50_A6W7N9 Cluster: Sucraseferredoxin family protein; n=1;
Kineococcus radiotolerans SRS30216|Rep:
Sucraseferredoxin family protein - Kineococcus
radiotolerans SRS30216
Length = 268
Score = 30.7 bits (66), Expect = 8.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 175 GAPALRLHLR*GAPPRRRLCCGRSNQRRQRVFQ 273
G P LR+HLR G+ P RL C ++ R R ++
Sbjct: 231 GRP-LRVHLRVGSAPAHRLTCSATDDRHARTWE 262
>UniRef50_A4Z032 Cluster: Putative uncharacterized protein; n=1;
Bradyrhizobium sp. ORS278|Rep: Putative uncharacterized
protein - Bradyrhizobium sp. (strain ORS278)
Length = 654
Score = 30.7 bits (66), Expect = 8.6
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 281 LKLWNTR*RLWLDLPQHSLLRGGAP*RKCSRSAG-APISAVRAGGVI 144
++ W TR + +LDLPQHS+ + G RK + A I ++ GGV+
Sbjct: 510 MEQWATRLQSFLDLPQHSIGQVGGGARKPTGIIDIAMIQSLARGGVV 556
>UniRef50_A2WEI9 Cluster: Mannose-1-phosphate guanylyltransferase;
n=1; Burkholderia dolosa AUO158|Rep: Mannose-1-phosphate
guanylyltransferase - Burkholderia dolosa AUO158
Length = 569
Score = 30.7 bits (66), Expect = 8.6
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 11 RKMSCESAQVAGGETSAVAAHPLRENRADRLDGTEAGRRVRQTTRSR 151
R+ + + AGG AHP R RA G AGR + R R
Sbjct: 88 RRTASHHERRAGGRPRRARAHPARTGRAQHRTGAHAGRARCERARRR 134
>UniRef50_Q9LX64 Cluster: Putative uncharacterized protein F4M19_20;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F4M19_20 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 712
Score = 30.7 bits (66), Expect = 8.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -2
Query: 279 EALEHTLTSLVGPATAQSPTRRRTLAQVQPERGGSNIGSP 160
+ L+ T S+ P+ S +R+R ++ PE G SN+G P
Sbjct: 440 KVLKETTGSVPFPSVGGSRSRKRDSSRRSPETGPSNVGKP 479
>UniRef50_A2YBB8 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 507
Score = 30.7 bits (66), Expect = 8.6
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +2
Query: 44 GGETSAVAAHPLRENRADRLDGTEAGRRVRQTTRSR 151
GGE VAA P +N A R D T A R T RSR
Sbjct: 126 GGERRGVAASPREKNAAKREDKT-ADERATSTVRSR 160
>UniRef50_O61673 Cluster: Potassium channel modulatory factor; n=1;
Aplysia californica|Rep: Potassium channel modulatory
factor - Aplysia californica (California sea hare)
Length = 354
Score = 30.7 bits (66), Expect = 8.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 109 TVEAICPVLAEWVGRDRGSLTSGYLCRLT 23
T E +CP+ A G D +T ++C LT
Sbjct: 20 TTEVVCPICASLPGGDPNHVTDDFMCHLT 48
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,530,218
Number of Sequences: 1657284
Number of extensions: 6921288
Number of successful extensions: 22268
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 21632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22263
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13220924981
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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