Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0110
         (367 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035628-1|AAH35628.1|  329|Homo sapiens C1q and tumor necrosis ...    30   2.0  
AF329838-1|AAK17962.1|  329|Homo sapiens complement-c1q tumor ne...    29   3.5  

>BC035628-1|AAH35628.1|  329|Homo sapiens C1q and tumor necrosis
           factor related protein 4 protein.
          Length = 329

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
 Frame = +2

Query: 2   PGCRKMSCESA--QVAGGETSAVAAHPLRENRADRLDGTEAGRRV-RQTTRSRLQHGLPI 172
           PG R+ + +SA  Q+  G+T  +  H   +        T +G  V           G P 
Sbjct: 112 PGARRAASQSAMLQLDYGDTVWLRLHGAPQYALGAPGATFSGYLVYADADADAPARGPPA 171

Query: 173 LEPPRSGCTCARVRRLVGDCAVAGP 247
              PRS  + AR R LVG  A  GP
Sbjct: 172 PPEPRSAFSAARTRSLVGSDAGPGP 196


>AF329838-1|AAK17962.1|  329|Homo sapiens complement-c1q tumor
           necrosis factor-related protein protein.
          Length = 329

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
 Frame = +2

Query: 2   PGCRKMSCESA--QVAGGETSAVAAHPLRENRADRLDGTEAGRRV-RQTTRSRLQHGLPI 172
           PG R+ + +SA  Q+  G+T  +  H            T +G  V           G P 
Sbjct: 112 PGARRAASQSAMLQLDYGDTVWLRLHGAPHYALGAPGATFSGYLVYADADADAPARGPPA 171

Query: 173 LEPPRSGCTCARVRRLVGDCAVAGP 247
              PRS  + AR R LVG  A  GP
Sbjct: 172 PPEPRSAFSAARTRSLVGSDAGPGP 196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,527,766
Number of Sequences: 237096
Number of extensions: 1148439
Number of successful extensions: 2558
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2558
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)