Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0110
(367 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical ... 29 1.3
U44902-1|AAA93318.1| 483|Caenorhabditis elegans serine/threonin... 26 9.5
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 26 9.5
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 26 9.5
AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical... 26 9.5
AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical ... 26 9.5
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 26 9.5
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 26 9.5
AC024770-7|AAP13756.1| 411|Caenorhabditis elegans Checkpoint ki... 26 9.5
AC024770-6|AAF59485.2| 503|Caenorhabditis elegans Checkpoint ki... 26 9.5
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 26 9.5
>AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical
protein Y17G9B.1 protein.
Length = 480
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 231 VLWQVQPETSTCVPELQCVTDKWFWLPLYVPFRV 332
+LWQ+ +TC P LQ ++W L L + F++
Sbjct: 421 ILWQL---ITTCKPRLQVDKERWIQLLLNIKFKI 451
>U44902-1|AAA93318.1| 483|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 483
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 33 HR*PEVRLPRSRPTHSARTGQIASTVRRPADGSAKRR 143
H +V P RP AR T + A+ SAKRR
Sbjct: 288 HNFGQVETPNGRPLKRARNNDENITCTQQAECSAKRR 324
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 42 PEVRLPRSRPTHSARTGQIASTVRRPADGSAKRR 143
PE+ +PRS S+R+ A RR S RR
Sbjct: 8 PEISIPRSGENKSSRSPSWAREARRSRSRSRDRR 41
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 42 PEVRLPRSRPTHSARTGQIASTVRRPADGSAKRR 143
PE+ +PRS S+R+ A RR S RR
Sbjct: 36 PEISIPRSGENKSSRSPSWAREARRSRSRSRDRR 69
>AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical
protein T08B2.5d protein.
Length = 163
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 42 PEVRLPRSRPTHSARTGQIASTVRRPADGSAKRR 143
PE+ +PRS S+R+ A RR S RR
Sbjct: 94 PEISIPRSGENKSSRSPSWAREARRSRSRSRDRR 127
>AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical
protein T08B2.5e protein.
Length = 184
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 42 PEVRLPRSRPTHSARTGQIASTVRRPADGSAKRR 143
PE+ +PRS S+R+ A RR S RR
Sbjct: 115 PEISIPRSGENKSSRSPSWAREARRSRSRSRDRR 148
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 42 PEVRLPRSRPTHSARTGQIASTVRRPADGSAKRR 143
PE+ +PRS S+R+ A RR S RR
Sbjct: 94 PEISIPRSGENKSSRSPSWAREARRSRSRSRDRR 127
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 42 PEVRLPRSRPTHSARTGQIASTVRRPADGSAKRR 143
PE+ +PRS S+R+ A RR S RR
Sbjct: 95 PEISIPRSGENKSSRSPSWAREARRSRSRSRDRR 128
>AC024770-7|AAP13756.1| 411|Caenorhabditis elegans Checkpoint
kinase protein 1, isoformb protein.
Length = 411
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 33 HR*PEVRLPRSRPTHSARTGQIASTVRRPADGSAKRR 143
H +V P RP AR T + A+ SAKRR
Sbjct: 196 HNFGQVETPNGRPLKRARNNDENITCTQQAECSAKRR 232
>AC024770-6|AAF59485.2| 503|Caenorhabditis elegans Checkpoint
kinase protein 1, isoforma protein.
Length = 503
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 33 HR*PEVRLPRSRPTHSARTGQIASTVRRPADGSAKRR 143
H +V P RP AR T + A+ SAKRR
Sbjct: 288 HNFGQVETPNGRPLKRARNNDENITCTQQAECSAKRR 324
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +2
Query: 176 EPPRSGCTCARVRRLVGDCAVAGPTRDVNVCSRASVC 286
+PP+ C+C + C+ A P + +AS C
Sbjct: 50 QPPQYSCSCQNTAPVQTSCSCAQPVQQQTYQVQASQC 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,548,374
Number of Sequences: 27780
Number of extensions: 157171
Number of successful extensions: 394
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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