Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0109
(698 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 73 5e-14
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 69 5e-13
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 58 1e-09
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 57 3e-09
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 56 4e-09
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 56 4e-09
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 55 9e-09
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 55 1e-08
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 51 1e-07
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 51 1e-07
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 44 3e-05
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 42 1e-04
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 38 0.002
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 35 0.010
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 35 0.013
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 33 0.039
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 33 0.052
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 29 0.85
SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 27 2.0
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 2.0
SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subuni... 27 2.6
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 26 6.0
SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces pomb... 26 6.0
SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr 2|... 26 6.0
SPCC970.09 |sec8||exocyst complex subunit Sec8|Schizosaccharomyc... 25 7.9
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 25 7.9
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 7.9
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 72.5 bits (170), Expect = 5e-14
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 2/189 (1%)
Frame = +1
Query: 136 IQSTRFSGKVAIVTASTEGIGYAIAKRLGSEGASVVI-CSRKESNVGKAVQSL-RSEGIT 309
+ S + + K ++T GIG A A EG+ +VI C +E + + + L EG
Sbjct: 35 VGSGKLAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREGRN 94
Query: 310 VEGVVCHVANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNV 489
+ ++ R L + A K G +D+L I D D++ WD F N+
Sbjct: 95 CWIWEGKLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNI 154
Query: 490 KSSWLLAKEAYPELVKRGGGSIVFISSIAAYQPTEPLGAYGVSKTTLLGLTKAIANETVH 669
S + + K A + + G SIV SSI AY L Y +K + T+ ++N+
Sbjct: 155 FSFFWVTKAAISHM--KSGSSIVNCSSINAYVGRPDLLDYTSTKGAITAFTRGLSNQYAQ 212
Query: 670 ENIRVNCVA 696
IRVN VA
Sbjct: 213 HGIRVNAVA 221
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 69.3 bits (162), Expect = 5e-13
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Frame = +1
Query: 157 GKVAIVTASTEGIGYAIAKRLGSEGASV-VICSRKESNVGKAVQSLRSEGITVEGVVCHV 333
GK ++T + GIG++IAK + G++V ++ R + + A + G+ + C +
Sbjct: 9 GKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHGVQAKAYSCPI 68
Query: 334 ANHEHRRRLFEVATSKFGG-VDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLA 510
N A + GG +D++ + D +E +W K+ +N+ ++ A
Sbjct: 69 ENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTA 128
Query: 511 KEAYPELVKRGGGSIVFISSIAAYQPTEP--LGAYGVSKTTLLGLTKAIANETVHENIRV 684
+ A K+G GS++F +S++ + P +Y +K + L +A+A E RV
Sbjct: 129 QAAGHHFKKQGKGSLIFTASMSGHIANWPQQWASYHATKAAVKHLARALAVEWA-PFARV 187
Query: 685 NCVA 696
N V+
Sbjct: 188 NSVS 191
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 58.0 bits (134), Expect = 1e-09
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 1/174 (0%)
Frame = +1
Query: 154 SGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHV 333
+ K+ + GIG ++ K L + +VV S ++ +Q V + V
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNRKGTVVFASARKPGAATKLQEWSKSHSNVHIIKLDV 63
Query: 334 ANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAK 513
++ E + T VD+L +++T + VW+ + NV + +
Sbjct: 64 SSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPIHVYQ 123
Query: 514 EAYPELVKRGGGS-IVFISSIAAYQPTEPLGAYGVSKTTLLGLTKAIANETVHE 672
YP L+K+G IVF SS+A +GA+ S + G +KA N T+ E
Sbjct: 124 AFYP-LIKKGRSKIIVFTSSLAG-----SMGAFFPSSQSAYGQSKAALNYTMKE 171
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 56.8 bits (131), Expect = 3e-09
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 4/178 (2%)
Frame = +1
Query: 154 SGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHV 333
+ KV + GIG ++ K L S + V S ++ +Q V+ V V
Sbjct: 4 TNKVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATELQEWSKSHPNVKTVELDV 63
Query: 334 ANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAK 513
+ + + G+D+L +++ E+VW+ + NV + K
Sbjct: 64 TSQQSANEAAQSVAKAVDGIDVLWLNSGICQSYYTVMEAPEEVWNAHYQTNVLGPIHVFK 123
Query: 514 EAYPELVKRGGGSIVFIS----SIAAYQPTEPLGAYGVSKTTLLGLTKAIANETVHEN 675
YP L K+ ++F S S+ ++ T AYG SK + K ++ E E+
Sbjct: 124 AFYPLLTKKKTRQVIFTSSECGSMGDFRAT-GFSAYGQSKAAINFTMKELSVELADEH 180
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 56.4 bits (130), Expect = 4e-09
Identities = 46/167 (27%), Positives = 71/167 (42%)
Frame = +1
Query: 160 KVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHVAN 339
KV ++T S++GIG A A+ L + + + + + + V+G V V
Sbjct: 7 KVILLTGSSKGIGLATAEALQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKGDVTEVG- 65
Query: 340 HEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAKEA 519
+ E A KFG +D + I D D W K+FD+N S K A
Sbjct: 66 ----KASIETAIKKFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSVVETVKYA 121
Query: 520 YPELVKRGGGSIVFISSIAAYQPTEPLGAYGVSKTTLLGLTKAIANE 660
P L ++ G+IV +SS AA + AY SK + L + +E
Sbjct: 122 IPHL-RKTKGTIVIVSSGAAVRVFPAWAAYCCSKAAINMLVMNLGSE 167
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 56.4 bits (130), Expect = 4e-09
Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 5/182 (2%)
Frame = +1
Query: 154 SGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHV 333
+ K+ + GIG ++ K L + +VV S ++ +Q V + +
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATELQEWSKSHSNVHIIKLDI 63
Query: 334 ANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAK 513
++ E + G VD+L +L+T + VW+ + NV + +
Sbjct: 64 SSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNSHYKTNVLGPIHVYQ 123
Query: 514 EAYPELVKRGGGSIV-----FISSIAAYQPTEPLGAYGVSKTTLLGLTKAIANETVHENI 678
YP LVK+G I+ + S+ A+ P G YG SK L K I+ E E
Sbjct: 124 AFYP-LVKKGESKIIVFTSSLVGSMGAFFPFNQSG-YGQSKAALNFTMKEISFELQDEGF 181
Query: 679 RV 684
V
Sbjct: 182 IV 183
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 55.2 bits (127), Expect = 9e-09
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Frame = +1
Query: 169 IVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHVANHEH 348
++T S++G+GYA+ K ++G +V+ CSR A ++ E + + V + +
Sbjct: 9 LITGSSKGLGYALVKVGLAQGYNVIACSR-------APDTITIEHSKLLKLKLDVTDVKS 61
Query: 349 RRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAKEAYPE 528
F+ A +FG VDI+ E++ ++ +VN + KEA
Sbjct: 62 VETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQM-NVNFWGVAYITKEALNL 120
Query: 529 LVKRG-GGSIVFISSIAAYQPTEPLGAYGVSKTTLLGLTKAIANE 660
+ + G GG I+ ISS+A Y P+ L Y SK + GL++ I E
Sbjct: 121 MRESGKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTIMRE 165
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 54.8 bits (126), Expect = 1e-08
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 2/182 (1%)
Frame = +1
Query: 157 GKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHVA 336
GK A+V GIG+AI GA+ I A + ++ G+ C V
Sbjct: 21 GKNAVVFGGARGIGHAICSVFAEAGANAFIVYNTTPGEKAAKEIAQANGVKTYTCKCDVT 80
Query: 337 NHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAKE 516
+ F F +DI+ I T E+ ++I +VN+ + +A
Sbjct: 81 IPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAIDMTYEEFANEI-NVNLLGVFNVAHN 139
Query: 517 AYPELVKRGGGSIVFISSIAAYQPTEPLG--AYGVSKTTLLGLTKAIANETVHENIRVNC 690
A P K+G GS+V +S++ P AY SK ++ L K++A E + RVNC
Sbjct: 140 AGPIFQKQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGVIQLIKSLAVEW-RKFARVNC 198
Query: 691 VA 696
V+
Sbjct: 199 VS 200
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 51.2 bits (117), Expect = 1e-07
Identities = 37/182 (20%), Positives = 77/182 (42%), Gaps = 2/182 (1%)
Frame = +1
Query: 145 TRFSGKVAIVTASTEGIGYAIAKRLGSEG-ASVVICSRKESNVGKAVQSLRSE-GITVEG 318
+R GK ++T ++ GIG + A + +++ +R+ S V + + L S+ ++V
Sbjct: 2 SRLDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLP 61
Query: 319 VVCHVANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSS 498
+ V++ + + E +F +D+L ++D + + NV
Sbjct: 62 LKLDVSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGM 121
Query: 499 WLLAKEAYPELVKRGGGSIVFISSIAAYQPTEPLGAYGVSKTTLLGLTKAIANETVHENI 678
+ + P + G I+ + SIA + Y +K+ L T A+ ET+ I
Sbjct: 122 MAMTRAVLPIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQFTSALRKETIDTRI 181
Query: 679 RV 684
R+
Sbjct: 182 RI 183
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 51.2 bits (117), Expect = 1e-07
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Frame = +1
Query: 157 GKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHVA 336
GK +V + +GIG++IA G +V+I KA + G+ V + ++
Sbjct: 21 GKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEETGVQVHTLKIDIS 80
Query: 337 NHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAKE 516
+ E F + ++ +LD+ ++K+ ++N S + +A
Sbjct: 81 RSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRS-VLDSPPHEFEKVMNINTNSVYRVAYY 139
Query: 517 AYPELVKRGGGSIVFISSIAAYQPTEP--LGAYGVSKTTLLGLTKAIANETVHENIRVNC 690
K+G G+++ +S++A P + AY SK + L KA+A E E R+N
Sbjct: 140 MGKIFKKQGFGNLIATASMSATIVNAPQHIAAYCASKAAVRQLCKALAVEWA-EFARINS 198
Query: 691 VA 696
V+
Sbjct: 199 VS 200
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 43.6 bits (98), Expect = 3e-05
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +1
Query: 154 SGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSE 300
+GKVA+VT S+ GIGY A L +GA V + R E K ++ + E
Sbjct: 41 TGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDE 89
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 41.5 bits (93), Expect = 1e-04
Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 4/184 (2%)
Frame = +1
Query: 157 GKVAIVTASTEGIGYAIAK---RLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVC 327
G+V ++T + GIG + K LG A + I S V A +L+++
Sbjct: 5 GRVVLITGAAGGIGKVLCKMFTELGDRVAGIDIVD--PSKVQDAALALQAD--------- 53
Query: 328 HVANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLL 507
V+ + E G +D+L + WD + ++ ++L
Sbjct: 54 -VSKADQIETAIEKVIQTLGPIDVLINNAGLADDTP-FEQLSHESWDHDVSLVLRGNYLT 111
Query: 508 AKEAYPELVKRG-GGSIVFISSIAAYQPTEPLGAYGVSKTTLLGLTKAIANETVHENIRV 684
+ P + K+G GGSIV I S+ + AY +K L LTKA+A IRV
Sbjct: 112 QRYVIPHMAKQGKGGSIVNIGSVNGHIYLGS-PAYSAAKAGLENLTKALAVRYGPLGIRV 170
Query: 685 NCVA 696
N A
Sbjct: 171 NVCA 174
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 37.5 bits (83), Expect = 0.002
Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 6/182 (3%)
Frame = +1
Query: 169 IVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLR-SEGITVEGVVCHV-ANH 342
++T + G+G IA+ +G I R E ++ + +QSL ++G + V ++
Sbjct: 5 LITGGSSGLGKRIAQIWSQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQSDM 64
Query: 343 EHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAKEAY 522
++ + +FE +D + + +++++ D I N+ S+ L+K A
Sbjct: 65 KNLKSIFESVE-----IDTVVHAAGVLQSSLCVRTSEKEI-DSIICTNLVSAIKLSKMAI 118
Query: 523 PELVKRGGGS----IVFISSIAAYQPTEPLGAYGVSKTTLLGLTKAIANETVHENIRVNC 690
E + I+ ISS + Y SK L TK +A E + IRVN
Sbjct: 119 LEWFRNKNSERDRLILNISSRLSTYALPGTSVYAASKAGLESFTKVLAAEVASKGIRVNA 178
Query: 691 VA 696
++
Sbjct: 179 IS 180
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 148 RFSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKE 261
+ +G V +VT + GIG + ++L S GA VVI R E
Sbjct: 72 KMNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLRTE 109
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 34.7 bits (76), Expect = 0.013
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 169 IVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGI 306
+VT ++G+G AIAK L GA+V I +R + + +AV L I
Sbjct: 26 LVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKI 71
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 33.1 bits (72), Expect = 0.039
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 157 GKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRS 297
G A+VT +T+GIG A +L G +VV+ SR + + + L +
Sbjct: 57 GYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKELET 103
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 32.7 bits (71), Expect = 0.052
Identities = 28/96 (29%), Positives = 46/96 (47%)
Frame = -1
Query: 482 TSNILSQTCSSVSKIEATAGLTAAFDTRISTPPNLLVATSNNRLLCS*LAT*QTTPSTVM 303
T + +T SS S + +++F + STP +L +++++ T +TPST+
Sbjct: 249 TESTFYETKSSTSSVPTQTIDSSSFTS--STPVSLTSSSTSSSGSSQDSTTIDSTPSTIA 306
Query: 302 PSLRRLCTAFPTLLSFRLQMTTEAPSLPSLLAIAYP 195
S + T+ P +TT APSL S L YP
Sbjct: 307 TSTLQPTTSSP--------ITTSAPSLSSALPTTYP 334
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 28.7 bits (61), Expect = 0.85
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 202 AIAKRLGSEGASVVICSRKESNVGKAVQSLRS-EGITVEGVVCHVA-NHEHRRRLFEVAT 375
+I LGS S+++ SN+ + ++ ++S +G E + H + N +RR F+ T
Sbjct: 804 SIDAELGSSSGSILVFLPGVSNIARCIREIKSKDGSKFEVLPLHASLNTSEQRRCFKTYT 863
Query: 376 SK 381
+
Sbjct: 864 KR 865
>SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 603
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 292 RSEGITVEGVVCHVANHEHRRRLFEVATSKFGGVDI 399
R + T+ CH +N R+RL + + FGG+ +
Sbjct: 23 RCQTCTLFQADCHYSNRARRKRLVQRSKETFGGITL 58
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.5 bits (58), Expect = 2.0
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = -1
Query: 533 TSSGYASLANSQELFTLTSNILSQTCSSVSKIEATAGLTAAFDTRISTPPNLLVATSNNR 354
TSS +S+A S T +SN++S +S A + + + S N +ATS +
Sbjct: 352 TSSAESSIATSP--ITSSSNVVSSISTSSMDSSAVSSYSVVQSSLASIISNAYIATSKSG 409
Query: 353 LL--CS*LAT*QTTPSTVMPSLRR 288
L S L T+ ST + SL R
Sbjct: 410 LNSGVSTLLASPTSSSTFVTSLLR 433
>SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subunit
Rpa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1227
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 279 SFPNV--ALFPAADDYGSTFTSQPLSYCVPNSFSRCCYNSHLPTEPSALNCTNRV 121
SFP++ A+ P D + + + L+Y V +C ++S E AL N++
Sbjct: 74 SFPDLQKAVKPHVDSFNALTNAGLLNYAVKEIGEKCAFDSITQEEGGALKFGNKI 128
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 580 YQPTEPLGAYGVSKTTLLGLTKAIANETVHEN 675
YQ TEP G Y K T +G A E + +N
Sbjct: 147 YQ-TEPAGIYNAWKATAIGRASKAAREYLEKN 177
>SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 955
Score = 25.8 bits (54), Expect = 6.0
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -1
Query: 551 LPPPLLTSSGYASLANSQELFTLTSNILSQTCSSVSKIEATAGLTAAFDTRISTPPNLLV 372
LP LL S L NSQEL+ + N + T + +A+A L + P+L +
Sbjct: 831 LPDSLLKSLADLLLKNSQELYIILFNGMVFTFPRDNISDASAVLIPLIRLVFAADPSLCI 890
Query: 371 ATSNNRL 351
+N L
Sbjct: 891 KYMSNVL 897
>SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 781
Score = 25.8 bits (54), Expect = 6.0
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +1
Query: 34 KLVLFCCYSGTKRSVVLLINKSLNISTSANPVRAIQSTRFSGKVAIVTASTEGIGYAIAK 213
+L+ C YSG ++ + T ++ +R + +S +++ + I
Sbjct: 468 ELMKICHYSGDSDISHFPKLQTALVETVSDLLRENLTPTYSFVESLIAIQSAYINTNHPD 527
Query: 214 RLGSEGASVVICSRKESN 267
LG +GA V+ SRKE N
Sbjct: 528 FLGVQGAMAVVLSRKEQN 545
>SPCC970.09 |sec8||exocyst complex subunit Sec8|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1088
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 269 LGKLCRASEARALQWKESSVTSPI 340
L +LCR R LQ+++ ++TS +
Sbjct: 764 LNELCRMENKRLLQYEDRAITSEV 787
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 64 TKRSVVLLINKSLNISTSANPVRAIQSTRFSGKVAIVT-----ASTEGIGYAIAKRL 219
T +L + +N+ST +R + S F+ + +VT ST+GI Y I L
Sbjct: 967 TSLKTMLTSKEEINLSTLHTQIRLLLSCLFNQLIEVVTEDQVDESTKGILYEIMSTL 1023
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 296 LRRLCTAFPTLLSFRLQ 246
L RLC +FPTL S+ L+
Sbjct: 900 LHRLCRSFPTLQSYTLK 916
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.132 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,938,404
Number of Sequences: 5004
Number of extensions: 61036
Number of successful extensions: 227
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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