Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0106
         (406 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    26   0.60 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   1.4  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   3.2  
AY341174-1|AAR13738.1|  280|Anopheles gambiae fibrinogen protein.      22   9.8  
AY341173-1|AAR13737.1|  280|Anopheles gambiae fibrinogen protein.      22   9.8  
AY341172-1|AAR13736.1|  280|Anopheles gambiae fibrinogen protein.      22   9.8  
AY341171-1|AAR13735.1|  280|Anopheles gambiae fibrinogen protein.      22   9.8  
AY341170-1|AAR13734.1|  280|Anopheles gambiae fibrinogen protein.      22   9.8  
AY341169-1|AAR13733.1|  280|Anopheles gambiae fibrinogen protein.      22   9.8  
AY341168-1|AAR13732.1|  280|Anopheles gambiae fibrinogen protein.      22   9.8  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.8 bits (54), Expect = 0.60
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 220 HQRALRCRNEEDGRRNEQIQIRTHEQRKQQFLQEH 324
           +++A R R E+D  +NE ++       ++Q  QEH
Sbjct: 204 NEQARREREEQDKMKNESLKSAQQHHSQKQAQQEH 238


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 209 EFSSIRERFDAEMRKMEEEMSKFRSELMNRESN 307
           E    R  +   +++ E+E++ FR+EL   E+N
Sbjct: 678 EMQKKRSEYSQLIQEHEKELADFRAELKQTEAN 710


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +1

Query: 214  LKHQRALRCRNEEDGRRNEQIQIRTHEQRKQQFLQEHN 327
            L+HQ   + + ++  ++ +Q Q   H+Q +Q  LQ H+
Sbjct: 1300 LQHQYQQQLQQQQQQQQQQQQQ---HQQHQQHQLQHHH 1334


>AY341174-1|AAR13738.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 9   GIRHEGSVLSCQPSSAYYSSETCLRENVSV 98
           G+RH+G   SC+   +  S +  LR +  V
Sbjct: 100 GMRHKGPFESCRDEPSKMSGKYLLRASNDV 129


>AY341173-1|AAR13737.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 9   GIRHEGSVLSCQPSSAYYSSETCLRENVSV 98
           G+RH+G   SC+   +  S +  LR +  V
Sbjct: 100 GMRHKGPFESCRDEPSKMSGKYLLRASNDV 129


>AY341172-1|AAR13736.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 9   GIRHEGSVLSCQPSSAYYSSETCLRENVSV 98
           G+RH+G   SC+   +  S +  LR +  V
Sbjct: 100 GMRHKGPFESCRDEPSKMSGKYLLRASNDV 129


>AY341171-1|AAR13735.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 9   GIRHEGSVLSCQPSSAYYSSETCLRENVSV 98
           G+RH+G   SC+   +  S +  LR +  V
Sbjct: 100 GMRHKGPFESCRDEPSKMSGKYLLRASNDV 129


>AY341170-1|AAR13734.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 9   GIRHEGSVLSCQPSSAYYSSETCLRENVSV 98
           G+RH+G   SC+   +  S +  LR +  V
Sbjct: 100 GMRHKGPFESCRDEPSKMSGKYLLRASNDV 129


>AY341169-1|AAR13733.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 9   GIRHEGSVLSCQPSSAYYSSETCLRENVSV 98
           G+RH+G   SC+   +  S +  LR +  V
Sbjct: 100 GMRHKGPFESCRDEPSKMSGKYLLRASNDV 129


>AY341168-1|AAR13732.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 9   GIRHEGSVLSCQPSSAYYSSETCLRENVSV 98
           G+RH+G   SC+   +  S +  LR +  V
Sbjct: 100 GMRHKGPFESCRDEPSKMSGKYLLRASNDV 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 343,983
Number of Sequences: 2352
Number of extensions: 6314
Number of successful extensions: 72
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)