Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0106
(406 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 52 2e-07
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 52 2e-07
U28944-1|AAA68368.1| 342|Caenorhabditis elegans Hypothetical pr... 28 2.2
AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and cap... 28 2.2
U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12 transcrip... 27 3.9
AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical ... 27 3.9
AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical ... 27 3.9
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 3.9
AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical ... 27 3.9
Z68751-6|CAA92976.1| 202|Caenorhabditis elegans Hypothetical pr... 26 9.0
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 52.0 bits (119), Expect = 2e-07
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +2
Query: 161 KRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESN 307
+R I + ++SVID EF ++R+RF+ EMR++EEEM + RSE N
Sbjct: 3 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSEFEGYRPN 51
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 52.0 bits (119), Expect = 2e-07
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +2
Query: 161 KRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESN 307
+R I + ++SVID EF ++R+RF+ EMR++EEEM + RSE N
Sbjct: 17 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSEFEGYRPN 65
>U28944-1|AAA68368.1| 342|Caenorhabditis elegans Hypothetical
protein C18A3.4a protein.
Length = 342
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 8 RNSARGISTVLSAVECVLFQ*NVFT-RERFSVCLVSTI 118
R A G TVL A+E + N FT E F V L+ST+
Sbjct: 269 RYGAFGCGTVLPAIETSFYWKNFFTVIEAFCVTLISTV 306
>AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 4 protein.
Length = 756
Score = 28.3 bits (60), Expect = 2.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 227 ERFDAEMRKMEEEMSKFRSELMNRE 301
E F+ + +KM EE KFR EL +
Sbjct: 701 EEFECQRKKMHEERRKFREELRTNQ 725
>U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12
transcriptional activator protein.
Length = 515
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 217 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 324
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 194 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 230
>AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical
protein Y79H2A.1b protein.
Length = 466
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 217 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 324
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 145 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 181
>AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical
protein Y79H2A.1a protein.
Length = 552
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 217 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 324
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 231 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 267
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 7 QEFGTRDQYCLVSRRVRIIPVKRVYARTFQCL 102
Q+F D YCL+S RVR++ + F+CL
Sbjct: 241 QQFSKEDLYCLLS-RVRMLVTFEDWHHRFKCL 271
>AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical
protein C51G7.4 protein.
Length = 579
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 217 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 324
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 258 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 294
>Z68751-6|CAA92976.1| 202|Caenorhabditis elegans Hypothetical
protein T05E11.8 protein.
Length = 202
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 161 KRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSE 286
K+N + + S + T+ S+IRE D + E + R+E
Sbjct: 101 KKNTTTVINNLSSVATKLSAIRENKDQTRKAQHEAIEALRNE 142
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,722,946
Number of Sequences: 27780
Number of extensions: 138056
Number of successful extensions: 539
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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