Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0104
(665 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688 54 1e-07
07_03_1564 + 27749899-27750166,27750431-27750507,27750923-277509... 50 2e-06
05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118 48 7e-06
01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251 48 7e-06
05_01_0379 + 2975701-2976831 44 8e-05
01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242 44 8e-05
05_01_0380 + 2978256-2979284 44 1e-04
06_02_0097 + 11710560-11710859,11712605-11713270 43 2e-04
01_01_0147 - 1332752-1333447,1333557-1333739 43 3e-04
05_01_0382 + 2985526-2986659 42 6e-04
02_02_0521 - 11156594-11156956,11157097-11157483,11158327-111583... 36 0.038
01_06_0794 + 32050413-32050523,32050663-32051391 35 0.067
01_01_0136 + 1237623-1237820,1238313-1239001,1239978-1240308,124... 34 0.088
12_01_0961 + 9566730-9566998,9567096-9567187,9567294-9567427,956... 34 0.12
05_01_0381 + 2981762-2982075,2982302-2982658,2982752-2982800 33 0.20
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 32 0.36
04_04_1161 + 31374240-31374403,31374495-31374812,31375347-313754... 31 0.82
09_04_0107 - 14640097-14640348,14640472-14640701,14640805-146412... 30 1.4
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 30 1.9
10_08_0184 - 15570471-15570684,15571085-15571354,15571489-155717... 30 1.9
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 30 1.9
03_05_1059 - 30020877-30021539,30022367-30022375 30 1.9
11_06_0141 + 20559828-20559986,20560074-20560281,20560375-205604... 29 4.4
02_01_0284 + 1907249-1907665,1907816-1907859,1909508-1909546,190... 29 4.4
11_06_0543 + 24792110-24792229,24792316-24792521,24793770-247944... 28 5.8
11_02_0052 + 7788655-7789850,7789921-7790011 28 5.8
10_01_0034 - 414654-415649,416654-417007 28 5.8
08_02_1377 + 26530653-26530988,26533137-26533999,26534739-26535252 28 5.8
07_03_0265 + 15976331-15976645,15977575-15977784,15977869-159779... 28 5.8
06_03_0485 + 21330547-21330684,21331391-21331471,21331610-213316... 28 5.8
05_01_0283 - 2198107-2198386,2198641-2199290 28 5.8
02_04_0650 + 24728700-24728725,24729582-24729660,24729802-247298... 28 5.8
07_01_1074 - 9599465-9599545,9599632-9599690,9600070-9600143,960... 28 7.7
06_01_1014 - 7936514-7936530,7936768-7936859,7937290-7937581,793... 28 7.7
05_01_0282 - 2191263-2192462 28 7.7
01_05_0630 - 23811576-23811728,23812473-23812561,23812644-238127... 28 7.7
>02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688
Length = 308
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 123 SEIVENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL-SVCPVCRALFF 299
+ +V ++ L L++LL+CPVC I QC GH +C CK R+ + CP CR
Sbjct: 41 TSLVTVELSSLTGLNDLLECPVCTNSMRPPILQCPNGHTICSNCKHRVENHCPTCRQELG 100
Query: 300 GTRNYAMEELIANVR 344
R A+E++ +++
Sbjct: 101 NIRCLALEKVAESLQ 115
>07_03_1564 +
27749899-27750166,27750431-27750507,27750923-27750950,
27751117-27751261,27751351-27751429,27751515-27751633,
27751732-27752073,27754807-27754896,27755730-27755955,
27756398-27756784,27757176-27757496
Length = 693
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 171 LLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL-SVCPVCRALFFGTRNYAMEELIANV 341
LL+CPVC I QC+ GH +C CK R+ + CP CR R A+E++ A++
Sbjct: 442 LLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASL 499
>05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118
Length = 361
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 171 LLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL-SVCPVCRALFFGTRNYAMEEL 329
LL+CPVC I QC GH +C CK R+ + CP CR R A+E++
Sbjct: 97 LLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKV 150
>01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251
Length = 347
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 171 LLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL-SVCPVCRALFFGTRNYAMEEL 329
LL+CPVC I QC GH +C CK R+ + CP CR R A+E++
Sbjct: 83 LLECPVCTNSMYPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKV 136
>05_01_0379 + 2975701-2976831
Length = 376
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +3
Query: 174 LQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLSV---CPVCRALFFG---TRNYAMEELIA 335
L+C VC+ + IFQC GH VC C+ L+ C VCR G R YA+E L+
Sbjct: 123 LECGVCFLLLRPPIFQCEVGHVVCAPCRDTLAPAGRCYVCRVAVAGGEYRRCYALERLVD 182
Query: 336 NVR 344
+R
Sbjct: 183 AIR 185
>01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242
Length = 417
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +3
Query: 171 LLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLSVCPVCRA-LFFGT---RNYAMEELIAN 338
+L CPVC++I +FQC+ GH VC C+ L C + FGT R AME ++ +
Sbjct: 36 VLHCPVCFQILRPPVFQCDLGHLVCSPCRDNLPAGGKCPSPSCFGTPSVRCVAMERVVNS 95
Query: 339 VRKLRAF 359
V A+
Sbjct: 96 VEVACAY 102
>05_01_0380 + 2978256-2979284
Length = 342
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +3
Query: 174 LQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLSV---CPVCRALFFG---TRNYAMEELIA 335
L+C VC+ IFQC GH VC C+ +L+ C VCR G R YA+E L+
Sbjct: 73 LECGVCFLPLRPPIFQCEVGHVVCSPCRDKLAPAGRCHVCRVAVAGGEYRRCYALERLVD 132
Query: 336 NVR 344
+R
Sbjct: 133 AIR 135
>06_02_0097 + 11710560-11710859,11712605-11713270
Length = 321
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 168 NLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLS-VCPVCRALFFGTRNYAMEELIANVR 344
++L C +C+E ++QC GH C C +LS C +C RN A+E+++ +++
Sbjct: 83 DVLDCSICFESLRPPLYQCQNGHVACFSCWSKLSNKCHICSRDAKFARNIALEKIVESIK 142
>01_01_0147 - 1332752-1333447,1333557-1333739
Length = 292
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 174 LQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL-SVCPVCRALFFGTRNYAMEELIA 335
L+CP+C+ ++ C GH CG C ++ ++CP C R +E+++A
Sbjct: 46 LECPICFVPFEDRVYMCKNGHAACGSCYAKMNTMCPCCIEPIGNIRCRPLEKVLA 100
>05_01_0382 + 2985526-2986659
Length = 377
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +3
Query: 174 LQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLSV---CPVCRALFFG---TRNYAMEELIA 335
L+C VC IFQC GH VC C+ +L+ C VCRA G R +A+E L+
Sbjct: 124 LECGVCCLPLRPPIFQCEVGHVVCAPCRDKLAPAGRCHVCRAAVAGGEYRRCHALERLVD 183
Query: 336 NVR 344
+R
Sbjct: 184 AIR 186
>02_02_0521 -
11156594-11156956,11157097-11157483,11158327-11158383,
11159671-11159970
Length = 368
Score = 35.5 bits (78), Expect = 0.038
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 213 IFQCNEGHNVCGRCKVRL-SVCPVCRALFFGTRNYAMEEL 329
+ +C GH +C CK R+ + CP CR R A+E++
Sbjct: 117 LLECQNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKV 156
>01_06_0794 + 32050413-32050523,32050663-32051391
Length = 279
Score = 34.7 bits (76), Expect = 0.067
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +3
Query: 159 DLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL---SVCPVCRALFFGTRNYAMEEL 329
DL+ +L C VC + QC GH +C C +L + C VC R +A+E++
Sbjct: 18 DLE-VLDCTVCCHPLKPPVLQCGVGHVICSSCHGKLPDKNRCHVCAMDTAYNRCFAVEQI 76
Query: 330 IANV 341
+ ++
Sbjct: 77 LRSI 80
>01_01_0136 +
1237623-1237820,1238313-1239001,1239978-1240308,
1240614-1241351
Length = 651
Score = 34.3 bits (75), Expect = 0.088
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 171 LLQCPVCYEIPTGHIFQC-NEGHNVCGRCKVRL-SVCPVCRA-LFFGTRNYAMEELIA 335
+L+C VC+ T ++QC GH C C + C CRA TR AME +A
Sbjct: 50 VLECDVCFGPLTPPLYQCMRRGHITCSTCVAEMGQECQWCRAPEATTTRCRAMEHFLA 107
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 171 LLQCPVCYEIPTGHIFQCNEGHNVCGRCK 257
LL C C + +F+C+E H VC C+
Sbjct: 390 LLHCHACLQPLKPPVFKCDEAHIVCSGCR 418
>12_01_0961 +
9566730-9566998,9567096-9567187,9567294-9567427,
9567542-9567591,9569026-9569100,9569179-9569734
Length = 391
Score = 33.9 bits (74), Expect = 0.12
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 10/123 (8%)
Frame = +3
Query: 150 ELPDLDNL---LQCPVCYEI-------PTGHIFQCNEGHNVCGRCKVRLSVCPVCRALFF 299
ELP +D L L C +C EI P GH F + +C R CP CR L
Sbjct: 151 ELPCMDRLREELSCAICLEICFEPSTTPCGHSFCMKCLKHAAAKCGKR---CPKCRQLIS 207
Query: 300 GTRNYAMEELIANVRKLRAFKLGGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDNQ 479
+R+ + ++ N +L F + R +AS S ++ D A+ + + N+ Q
Sbjct: 208 NSRSCTVNTVLWNTIQL-LFPSETEARRTSIASSS------ETNDDLAQQISQRSNSMAQ 260
Query: 480 NSV 488
+
Sbjct: 261 GGI 263
>05_01_0381 + 2981762-2982075,2982302-2982658,2982752-2982800
Length = 239
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 174 LQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLS 269
L+C VC +FQC +GH VC C+ +L+
Sbjct: 66 LECGVCRLPLRPPVFQCEDGHVVCSPCRDKLA 97
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 462 ENNDNQNSVVAPNPCKGLFRCLCCKNGNSIRLPAARLLNHLRYF 593
+++DN++ P+ G+++C C++GN + + LRYF
Sbjct: 25 DSDDNRSDPQEPSRNPGIWQCTICEHGNDAKKKSCEQCGVLRYF 68
>04_04_1161 +
31374240-31374403,31374495-31374812,31375347-31375493,
31375674-31375754,31375799-31375886,31375999-31376176,
31376705-31376794,31376795-31376866,31377247-31377257
Length = 382
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 51 RILLSI-HSG*IDFFINQPTLFYIMSEIVENKVDELPDLDNLLQCP 185
RILL+I H I F+N + Y +EI+++ + ++P+ ++LL+ P
Sbjct: 149 RILLTILHCHPIRAFLNWHLVRYKAAEIIKDLIPQIPEFNDLLKLP 194
>09_04_0107 -
14640097-14640348,14640472-14640701,14640805-14641215,
14641481-14643831,14643927-14644093
Length = 1136
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 366 GGKVTRGLLASDSSSTPARDSGSDNAEYLGEDE 464
GGK T + AS SSS+P D+ S++ L E
Sbjct: 488 GGKKTTAMAASSSSSSPVHDAESEDENSLDHSE 520
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 366 GGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDNQN 482
GG +G + + DS S++ EYL EDE +D+++
Sbjct: 186 GGGAKQGKKKKKTENWMEEDSDSEDEEYLDEDEEDDDEH 224
>10_08_0184 -
15570471-15570684,15571085-15571354,15571489-15571711,
15571809-15571875,15571996-15572137,15572226-15572290
Length = 326
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 132 VENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRC 254
VE +V E+ DL+ L+C +C E+ I + H++C RC
Sbjct: 124 VEERVSEV-DLERELECGICLEV-NAKIVLPDCAHSLCMRC 162
>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
Length = 640
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 393 ASDSSSTPARDSGSDNAEYLGEDENNDNQNSVVAPNPCK 509
+S SSS+ A D G DN E +D +ND S + N K
Sbjct: 469 SSSSSSSLAMDRGEDNHELPRQDHHNDMATSSESVNQLK 507
>03_05_1059 - 30020877-30021539,30022367-30022375
Length = 223
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 231 GH-NVCGRCKVRLSVCPVCRALFFGTRN 311
GH ++C C R VCP+CR+ T N
Sbjct: 47 GHASLCAECSQRCDVCPICRSPIPDTGN 74
>11_06_0141 +
20559828-20559986,20560074-20560281,20560375-20560433,
20560532-20560590,20560809-20560886,20560974-20561073,
20561174-20561245,20561327-20561434,20561677-20561730,
20562847-20563296
Length = 448
Score = 28.7 bits (61), Expect = 4.4
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +3
Query: 333 ANVRKLRAFKLGGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDNQNSVVAPNPCKG 512
A K+ A GKV + S S+S PAR + + A + + D + +V PN +
Sbjct: 63 ARKAKVAAAVANGKVGKKPALSQSASFPARGAAAKKAATPKQAKTTDGKGAV--PNGSEK 120
Query: 513 LFRCLCCKNGNSIRLPAA 566
K NS R PAA
Sbjct: 121 AAGRAVEKKVNSARTPAA 138
>02_01_0284 +
1907249-1907665,1907816-1907859,1909508-1909546,
1909791-1910112,1910803-1910892,1911541-1911609,
1911969-1912074,1912146-1912234,1912349-1912461,
1912555-1912657
Length = 463
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 297 FGTRNYAMEELIANVRKLRAFKLGGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDN 476
F T Y + + R+F + G +SDS+S+P+ + SD E G+ N N
Sbjct: 208 FTTMAYPVSPIAGRRSNWRSFAASLNLEDGPASSDSTSSPSEQT-SDGGEVYGDPSENLN 266
Query: 477 QNSV 488
+
Sbjct: 267 SRKL 270
>11_06_0543 +
24792110-24792229,24792316-24792521,24793770-24794462,
24794538-24794717,24794793-24795084,24795166-24795375
Length = 566
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 135 ENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRC 254
E + + D+DN+ P+ + GH +E +V G+C
Sbjct: 238 EAGLKSMDDVDNIEMAPLAAQFKLGHSLTTDEYRHVVGKC 277
>11_02_0052 + 7788655-7789850,7789921-7790011
Length = 428
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 89 KINLATMYT*QYPIMLKLKTKKQLAP 12
K+ L T Y Q P+ML L K+LAP
Sbjct: 300 KVQLETEYILQRPVMLTLSLDKRLAP 325
>10_01_0034 - 414654-415649,416654-417007
Length = 449
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 501 PCKGLFRCLCCKNGNSIRLPAAR 569
P FRC CC N +S +P AR
Sbjct: 12 PLLEFFRCRCCHNSSSRAVPPAR 34
>08_02_1377 + 26530653-26530988,26533137-26533999,26534739-26535252
Length = 570
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 7 CKGASCFFVFNFNIIGYC*VYIVARLI 87
C+GA CFF+ + + G+C V V LI
Sbjct: 526 CEGAICFFLSSLIMSGFCIVAAVLSLI 552
>07_03_0265 +
15976331-15976645,15977575-15977784,15977869-15977916,
15978307-15978675,15978736-15978747,15978763-15978870,
15979156-15979493,15980313-15980430,15983247-15984107,
15984457-15984750
Length = 890
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 318 MEELIANVRKLRAFKLGGKVTRGLLASDSSSTPAR 422
+EE+ NV RAF LG KV + LLA S A+
Sbjct: 852 LEEVKINVDCTRAFSLGSKVLKKLLALPRVSDKAK 886
>06_03_0485 +
21330547-21330684,21331391-21331471,21331610-21331683,
21331767-21331842,21332014-21332081,21332803-21332926,
21333264-21333362,21333679-21333815,21334166-21334247,
21334595-21334657,21335272-21335319,21335452-21335514,
21335840-21335923,21336098-21336118
Length = 385
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -3
Query: 246 HIHYDLHCIGKYDL*GF-HNI-LDTE-VSYPSLAIRQPYFQLSPTLC 115
H +YD+ + K G H+I +D E + +P+ R YF L+PTLC
Sbjct: 173 HTNYDIRMLSKSIEKGVTHDISIDPENIKWPTFK-RLSYFMLAPTLC 218
>05_01_0283 - 2198107-2198386,2198641-2199290
Length = 309
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 483 SVVAPNPCKGLFRCLCCKN 539
S+ + C GL CLCCKN
Sbjct: 114 SISPKDCCNGLLLCLCCKN 132
>02_04_0650 +
24728700-24728725,24729582-24729660,24729802-24729889,
24730216-24730297,24731083-24731278,24731432-24731816,
24733332-24734428,24734621-24734886,24735565-24735631,
24735722-24735772,24736033-24736123,24736239-24736345
Length = 844
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 11/58 (18%)
Frame = +3
Query: 465 NNDNQNSVVAPNPCKGLF----------RCLCCKN-GNSIRLPAARLLNHLRYFHSPE 605
N+D+ N+ + P PCKG +C C +N GN R+ + HL+ F +PE
Sbjct: 602 NSDSSNTEMNPGPCKGHLTRKFIKECWRKCGCTRNCGN--RVVQRGITRHLQVFLTPE 657
>07_01_1074 -
9599465-9599545,9599632-9599690,9600070-9600143,
9600797-9600996,9601074-9601365,9601665-9602411,
9602653-9602696,9602714-9602827,9603590-9603838,
9603922-9603927
Length = 621
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 120 MSEIVEN-KVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRC 254
M + +E +++ L D+ N+ P+ + GH +E N+ G C
Sbjct: 279 MQDFLEGARLNSLFDVRNIANAPLAAQYKLGHSLTTDEYRNIVGNC 324
>06_01_1014 -
7936514-7936530,7936768-7936859,7937290-7937581,
7937690-7937759,7938131-7938223
Length = 187
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 189 CYEIPTGHIFQCNEGHNVCGR--CKVRLSVCPVCRALFFGTR 308
C+ IP GH F C C R + + CP+CR L R
Sbjct: 135 CFFIPCGHGFAC----FTCARRIAEDKNQACPICRRLIHRVR 172
>05_01_0282 - 2191263-2192462
Length = 399
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 504 CKGLFRCLCCKN 539
C GL CLCCKN
Sbjct: 126 CNGLLLCLCCKN 137
>01_05_0630 -
23811576-23811728,23812473-23812561,23812644-23812764,
23812867-23812992,23813399-23813505,23813742-23813856,
23815071-23815274
Length = 304
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 454 VKMKITIIKIQ*WPLTHVKDFFVASAARMGIPSDFQQLVYLTTFATFILQNF*RDEQKAV 633
V KI ++ + W L HV F + AR + +L+Y + Q+ +AV
Sbjct: 221 VHYKIALLPVLCWALDHVARFLRRNFARSSLYRQLLKLMYHAPVTSGYHQSAWARIGRAV 280
Query: 634 NTFKHGRSP 660
N + H +P
Sbjct: 281 NPYIHRYAP 289
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,404,056
Number of Sequences: 37544
Number of extensions: 353308
Number of successful extensions: 1059
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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