Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0104
         (665 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89792-1|AAB94380.1|  339|Caenorhabditis elegans seven-in-absent...    57   1e-08
AC024759-5|AAK68432.1|  419|Caenorhabditis elegans Hypothetical ...    57   1e-08
Z70681-2|CAA94578.2|  203|Caenorhabditis elegans Hypothetical pr...    37   0.011
Z70205-2|CAA94116.1|  529|Caenorhabditis elegans Hypothetical pr...    33   0.14 
U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical pr...    32   0.32 
U21308-5|AAB93318.1|  258|Caenorhabditis elegans Warthog (hedgeh...    32   0.42 
AC024817-27|AAY86296.1|  636|Caenorhabditis elegans Hypothetical...    31   0.56 
AL023834-1|CAA19481.1|  177|Caenorhabditis elegans Hypothetical ...    31   0.73 
U53337-2|AAA96184.1|  639|Caenorhabditis elegans Hypothetical pr...    31   0.97 
U21317-6|AAA62527.1|  313|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AF164625-1|AAD47816.1|  944|Caenorhabditis elegans tandem-array-...    29   3.9  
AF022974-6|AAC48041.1|  944|Caenorhabditis elegans Tandem array ...    29   3.9  
Z83127-3|CAB05629.2|  291|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z22177-12|CAA80152.1|  974|Caenorhabditis elegans Hypothetical p...    28   5.2  
Z19155-5|CAA79562.1|  974|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AF067217-1|AAY55828.1|  191|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>U89792-1|AAB94380.1|  339|Caenorhabditis elegans seven-in-absentia 
           protein homologue-1 protein.
          Length = 339

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 25/75 (33%), Positives = 36/75 (48%)
 Frame = +3

Query: 147 DELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLSVCPVCRALFFGTRNYAMEE 326
           D   ++ ++ +CPVC E       QC+ GH VC  C+ +L  CP CR      RN  +E+
Sbjct: 79  DSSAEILSVFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEK 138

Query: 327 LIANVRKLRAFKLGG 371
           +   VR    F   G
Sbjct: 139 IANTVRFPCKFSTSG 153


>AC024759-5|AAK68432.1|  419|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.2 protein.
          Length = 419

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 25/75 (33%), Positives = 36/75 (48%)
 Frame = +3

Query: 147 DELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLSVCPVCRALFFGTRNYAMEE 326
           D   ++ ++ +CPVC E       QC+ GH VC  C+ +L  CP CR      RN  +E+
Sbjct: 145 DSSAEILSVFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEK 204

Query: 327 LIANVRKLRAFKLGG 371
           +   VR    F   G
Sbjct: 205 IANTVRFPCKFSTSG 219


>Z70681-2|CAA94578.2|  203|Caenorhabditis elegans Hypothetical
           protein C30F2.2 protein.
          Length = 203

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
 Frame = +3

Query: 153 LPDLDNLLQCPVCYEIPTGHIFQ-CNE--GHNVCGRCKVRLSVCPVCRA--LFFGT-RNY 314
           LP++D   +CP C E    +  + C    GH++C +C+ ++  CP+C+    FFGT  NY
Sbjct: 2   LPNVD-FSRCPTCLEDYDDNSHRPCVGFCGHSICLKCQSKIVSCPLCKRKNAFFGTVINY 60

Query: 315 AMEELIANVRKL 350
            + +    +R+L
Sbjct: 61  QLLDSCLAIRQL 72


>Z70205-2|CAA94116.1|  529|Caenorhabditis elegans Hypothetical
           protein C11H1.3 protein.
          Length = 529

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
 Frame = +3

Query: 114 YIMSEI--VENKVDELPDLDNLLQCPVCY-EIPTGHIFQCNEGHNVCGRC----KVRLSV 272
           Y++ EI  +ENK  E  D D+ L+C +C  +I    I  C     VC  C    + + + 
Sbjct: 245 YLLQEIFGIENKSVETMDDDSGLECIICLSDIRDTVILPCRH-LCVCSNCADSLRYKHNN 303

Query: 273 CPVCRALF 296
           CP+CR+ F
Sbjct: 304 CPICRSPF 311


>U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical
           protein F42C5.4 protein.
          Length = 712

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 10/45 (22%), Positives = 25/45 (55%)
 Frame = +3

Query: 213 IFQCNEGHNVCGRCKVRLSVCPVCRALFFGTRNYAMEELIANVRK 347
           +  CN  H++C +C  + + CP+C+     + NY   +++ + ++
Sbjct: 51  VSSCN--HSLCSQCFDKFTECPICKEPLVRSENYQARKIVEHFKE 93


>U21308-5|AAB93318.1|  258|Caenorhabditis elegans Warthog
           (hedgehog-like family)protein 10 protein.
          Length = 258

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +3

Query: 405 SSTPARDSGSDNAEYLGEDENNDNQNSVVAPNPCKGLFRCLCCKNGNSIRLPAARLLNHL 584
           ++TP  +  ++ AE L ED+ NDN+  +V  N  + +      +       PA +  N L
Sbjct: 182 TTTPTVEEEAEEAEQLEEDQPNDNEAEIVESNDEEEVVEEETEEEEEVTTTPAPKPFNPL 241

Query: 585 RY 590
           RY
Sbjct: 242 RY 243


>AC024817-27|AAY86296.1|  636|Caenorhabditis elegans Hypothetical
           protein Y54G2A.40 protein.
          Length = 636

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 222 CNEGHNVCGRCKVRLSVCPVCRALFFGTRNYAMEEL 329
           C+  H++C +C  +   CP+C      T NYA  ++
Sbjct: 31  CSCQHSLCTQCFNKYKNCPICAKPLVRTENYAARQI 66


>AL023834-1|CAA19481.1|  177|Caenorhabditis elegans Hypothetical
           protein Y32B12A.1 protein.
          Length = 177

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +3

Query: 171 LLQCPVCYEIPTGHIFQCN--EGHNVCGRCKVR 263
           +++C  CY   TGH F+C     +++C  C+ R
Sbjct: 132 IVRCDSCYTTITGHRFKCTICTDYDICSSCEAR 164


>U53337-2|AAA96184.1|  639|Caenorhabditis elegans Hypothetical
           protein R02E12.4 protein.
          Length = 639

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +3

Query: 174 LQCPVCYEIPTGHIFQCNEGHNVCGRCKVR----LSVCPVCR 287
           +QC +C+++    +      H++C  C  R     SVCP+CR
Sbjct: 24  VQCHICFQVNHEPVTFLTCKHSICAGCAGRWLSSCSVCPMCR 65


>U21317-6|AAA62527.1|  313|Caenorhabditis elegans Hypothetical
           protein B0495.8a protein.
          Length = 313

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 22/55 (40%), Positives = 27/55 (49%)
 Frame = +3

Query: 318 MEELIANVRKLRAFKLGGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDNQN 482
           M+E I   RK R  KLG +  RG    +S     RD G D  EY G D + D +N
Sbjct: 229 MKETIDERRKEREEKLGSQ--RGYQRRESYGR--RDRGGDRGEYRG-DRDRDRRN 278


>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
           protein T13H2.5a protein.
          Length = 2471

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
 Frame = +3

Query: 180 CPVCYEIPTGHIFQCNEGHNVCGRCKVRL-----SVCPVCR 287
           C VC E+  G I     GH  C +C +       + CP CR
Sbjct: 162 CDVCQELIQGSIMTKKCGHRFCDQCILVAFMRSGNTCPTCR 202


>AF164625-1|AAD47816.1|  944|Caenorhabditis elegans
           tandem-array-modifier protein protein.
          Length = 944

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 168 NLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL 266
           ++++CP+CY I      Q   GH +C  C  RL
Sbjct: 17  HVVECPICYNI-YDKPMQMGCGHTLCSTCIGRL 48


>AF022974-6|AAC48041.1|  944|Caenorhabditis elegans Tandem array
           expression modifierprotein 1 protein.
          Length = 944

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 168 NLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL 266
           ++++CP+CY I      Q   GH +C  C  RL
Sbjct: 17  HVVECPICYNI-YDKPMQMGCGHTLCSTCIGRL 48


>Z83127-3|CAB05629.2|  291|Caenorhabditis elegans Hypothetical
           protein T23F6.3 protein.
          Length = 291

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
 Frame = +3

Query: 177 QCPVCYEIPTGHIFQCNEGHNVCGRCKV------RLSV---CPVCRALFFGTRNYAMEEL 329
           +C VC+E P      CN   NV G CK       R S    CP+CR  +  T + +  E+
Sbjct: 209 ECTVCFETPVDPQ-GCNRCMNVIG-CKTCVQRWHRSSTQPSCPLCRRRWIATPDVSPMEI 266

Query: 330 IANVRK 347
           I + R+
Sbjct: 267 IKSRRQ 272


>Z22177-12|CAA80152.1|  974|Caenorhabditis elegans Hypothetical
           protein F54G8.4 protein.
          Length = 974

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
 Frame = +3

Query: 144 VDELPDLDNLLQCPVCYE-------IPTGHIFQCNEGHNVCGRCKVRLSVCPVCRA 290
           V+ L  ++ LL CP+C +       +P  H F C      C     R   CP CRA
Sbjct: 31  VNPLEKIEQLLTCPICLDRYKQPKLLPCQHTF-CYPCLESCADTLHRNLKCPECRA 85


>Z19155-5|CAA79562.1|  974|Caenorhabditis elegans Hypothetical
           protein F54G8.4 protein.
          Length = 974

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
 Frame = +3

Query: 144 VDELPDLDNLLQCPVCYE-------IPTGHIFQCNEGHNVCGRCKVRLSVCPVCRA 290
           V+ L  ++ LL CP+C +       +P  H F C      C     R   CP CRA
Sbjct: 31  VNPLEKIEQLLTCPICLDRYKQPKLLPCQHTF-CYPCLESCADTLHRNLKCPECRA 85


>AF067217-1|AAY55828.1|  191|Caenorhabditis elegans Hypothetical
           protein F56A6.5 protein.
          Length = 191

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
 Frame = +3

Query: 177 QCPVCY-EIPTGHIFQC--NEGHNVCGRCKVRL--SVCPVCR 287
           +C +CY E        C    GH +C RC+++L    CP C+
Sbjct: 5   ECSICYDEYDHDTQIPCIGTCGHTICDRCRLQLLNKRCPHCK 46


>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical protein
            T21E8.2 protein.
          Length = 1263

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +1

Query: 190  VMKSLQVIFSNAMKVIMYVADVKFGFLSARYAGHYFLEPGTMPWKSS 330
            ++++L +  + A     Y+ D K    +A    H F  P TMP+ SS
Sbjct: 959  ILETLSMTANMAGSAAAYLPDYKKAVHAAGLIFHLFTYPATMPFSSS 1005


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,017,643
Number of Sequences: 27780
Number of extensions: 313936
Number of successful extensions: 911
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)