Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0102
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   300   1e-81
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   300   1e-81
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   300   1e-81
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   300   1e-81
BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   257   1e-68
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   257   1e-68
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    31   1.6  
AF314193-1|AAK00302.1| 3109|Drosophila melanogaster Toutatis pro...    29   5.0  
AE013599-1322|AAF58638.2| 3080|Drosophila melanogaster CG10897-P...    29   5.0  

>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  300 bits (736), Expect = 1e-81
 Identities = 145/190 (76%), Positives = 167/190 (87%)
 Frame = +3

Query: 3   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 182
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 183 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 362
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 363 VYNAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGRE 542
           VY+AILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 543 VTFEFPEPYL 572
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  300 bits (736), Expect = 1e-81
 Identities = 145/190 (76%), Positives = 167/190 (87%)
 Frame = +3

Query: 3   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 182
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 183 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 362
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 363 VYNAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGRE 542
           VY+AILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 543 VTFEFPEPYL 572
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  300 bits (736), Expect = 1e-81
 Identities = 145/190 (76%), Positives = 167/190 (87%)
 Frame = +3

Query: 3   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 182
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 183 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 362
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 363 VYNAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGRE 542
           VY+AILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 543 VTFEFPEPYL 572
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  300 bits (736), Expect = 1e-81
 Identities = 145/190 (76%), Positives = 167/190 (87%)
 Frame = +3

Query: 3   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 182
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 183 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 362
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 363 VYNAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGRE 542
           VY+AILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 543 VTFEFPEPYL 572
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  257 bits (629), Expect = 1e-68
 Identities = 125/166 (75%), Positives = 145/166 (87%)
 Frame = +3

Query: 3   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 182
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 183 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 362
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 363 VYNAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 500
           VY+AILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  257 bits (629), Expect = 1e-68
 Identities = 125/166 (75%), Positives = 145/166 (87%)
 Frame = +3

Query: 3   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 182
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 183 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 362
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 363 VYNAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 500
           VY+AILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
           protein.
          Length = 1489

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = +3

Query: 156 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 335
           NKK  ++   + KL  +++    +  + + K   KH+  V + K  PK + KT+ + K+K
Sbjct: 567 NKK--LLNSSVVKLSLYEQNPRMVPSKFQPKCEEKHMEPVAEEKPKPKSAAKTKESRKRK 624

Query: 336 RPRSRT 353
           +P ++T
Sbjct: 625 QPVAQT 630


>AF314193-1|AAK00302.1| 3109|Drosophila melanogaster Toutatis
           protein.
          Length = 3109

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +3

Query: 327 KQKRPRSRTLTSVYNAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHK 497
           +Q++   + L S  NAI   L FP     KR R++++ + +      ++QQ   +H+
Sbjct: 562 QQQQQAQKELDSTKNAISSLLAFPGLSPAKRARLEMEYAAMAAAAQQQHQQAQQQHQ 618


>AE013599-1322|AAF58638.2| 3080|Drosophila melanogaster CG10897-PA,
           isoform A protein.
          Length = 3080

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +3

Query: 327 KQKRPRSRTLTSVYNAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHK 497
           +Q++   + L S  NAI   L FP     KR R++++ + +      ++QQ   +H+
Sbjct: 562 QQQQQAQKELDSTKNAISSLLAFPGLSPAKRARLEMEYAAMAAAAQQQHQQAQQQHQ 618


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,247,717
Number of Sequences: 53049
Number of extensions: 544251
Number of successful extensions: 1398
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1398
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)