Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0100
(759 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VWA1 Cluster: Clathrin light chain; n=9; Endopterygot... 109 6e-23
UniRef50_Q2M0W4 Cluster: GA19975-PA; n=4; Endopterygota|Rep: GA1... 102 8e-21
UniRef50_P09496-2 Cluster: Isoform Non; n=45; Metazoa|Rep: Isofo... 87 4e-16
UniRef50_A7SZR4 Cluster: Predicted protein; n=1; Nematostella ve... 84 3e-15
UniRef50_UPI0000E4601B Cluster: PREDICTED: similar to clathryn l... 69 2e-10
UniRef50_P09496 Cluster: Clathrin light chain A; n=36; Euteleost... 61 3e-08
UniRef50_Q5DH75 Cluster: SJCHGC00953 protein; n=1; Schistosoma j... 58 2e-07
UniRef50_Q2PFR5 Cluster: Putative uncharacterized protein; n=7; ... 57 4e-07
UniRef50_P90961 Cluster: Clathrin light chain protein 1; n=2; Ca... 48 3e-04
UniRef50_Q4PEZ7 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_Q9USP6 Cluster: Clathrin light chain; n=1; Schizosaccha... 44 0.003
UniRef50_A1CHU7 Cluster: Clathrin light chain; n=16; Pezizomycot... 42 0.017
UniRef50_Q7SGU9 Cluster: Putative uncharacterized protein NCU032... 39 0.15
UniRef50_P41996 Cluster: Cytokinesis protein B0280.5 precursor; ... 37 0.62
UniRef50_A4S4M3 Cluster: Predicted protein; n=2; Ostreococcus|Re... 34 4.4
UniRef50_Q9ZHL0 Cluster: Large supernatant protein 2; n=4; Haemo... 33 5.8
UniRef50_Q82DY7 Cluster: Putative uncharacterized protein; n=2; ... 33 5.8
>UniRef50_Q9VWA1 Cluster: Clathrin light chain; n=9;
Endopterygota|Rep: Clathrin light chain - Drosophila
melanogaster (Fruit fly)
Length = 219
Score = 109 bits (263), Expect = 6e-23
Identities = 76/208 (36%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Frame = +1
Query: 202 DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAISTS---------TNGF 345
DFGD F E VDPAA+FLAREQ+ L LE E+ +++ PPA ST T
Sbjct: 2 DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAASTDEGLGELLGGTASE 61
Query: 346 DDFVEV-------PSASAFDANGLLDDAPLGSTPTTVFKQEREEPEKIKIWREEQXXXXX 504
D + S +F+ G + P+G + REEPEKI+ WREEQ
Sbjct: 62 GDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPP---PSREEPEKIRKWREEQKQRLE 118
Query: 505 XXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKXXXXXXXXXXXXGSESSVEEGNEW 684
+ Q +KKEL+DW + E ISKTK ++E G EW
Sbjct: 119 EKDIEEERKKEELRQQSKKELDDWLRQIGESISKTKLASRNAEKQAATLENGTIEPGTEW 178
Query: 685 ARVSELCDFGP---RRGRDVARLRSIVL 759
R+++LCDF P + G+DV+R+RSI L
Sbjct: 179 ERIAKLCDFNPKVNKAGKDVSRMRSIYL 206
>UniRef50_Q2M0W4 Cluster: GA19975-PA; n=4; Endopterygota|Rep:
GA19975-PA - Drosophila pseudoobscura (Fruit fly)
Length = 222
Score = 102 bits (245), Expect = 8e-21
Identities = 75/208 (36%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Frame = +1
Query: 202 DFGDSF-VEPEVDPAADFLAREQNQLAGLEDEL---ETSAPPPAISTSTNGFD----DFV 357
DFGD F ++ EVDPAA+FLAREQ+ L LE E+ +AP A T G
Sbjct: 2 DFGDDFALKEEVDPAAEFLAREQSALGDLEAEITGGSGTAPDAATVDDTLGLGLGGLSGA 61
Query: 358 EVPSASAFDANGLLDDAPLGS---------TPTTVF--KQEREEPEKIKIWREEQXXXXX 504
S A G ++ GS P + REEPEKI+ WREEQ
Sbjct: 62 GAELGSELSATGGGLESSTGSFEVIGGESNEPVGISGPPPSREEPEKIRKWREEQKQRLE 121
Query: 505 XXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKXXXXXXXXXXXXGSESSVEEGNEW 684
+ Q +KKEL+DW + E ISKTK ++E G EW
Sbjct: 122 EKDVEEERKKEELRQQSKKELDDWLRQIGESISKTKQSSRNAEKQAASLENGTIEPGTEW 181
Query: 685 ARVSELCDFGP---RRGRDVARLRSIVL 759
R+++LCDF P + G+DV+R+RSI L
Sbjct: 182 ERIAKLCDFNPKVNKAGKDVSRMRSIYL 209
>UniRef50_P09496-2 Cluster: Isoform Non; n=45; Metazoa|Rep: Isoform
Non - Homo sapiens (Human)
Length = 218
Score = 87.0 bits (206), Expect = 4e-16
Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Frame = +1
Query: 229 EVDPAADFLAREQNQLAGLEDE-----LETSAPPPAISTSTNGFDDFVE-VPSASAF-DA 387
E DPAA FLA++++++AG+E++ L+ AP P G D V+ V + + ++
Sbjct: 28 EEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVDGVMNGEYYQES 87
Query: 388 NGLLDDAPLGSTPTTVFKQEREEPEKIKIWREEQXXXXXXXXXXXXXXXXXMLQIAKKEL 567
NG D S + + EPE I+ WREEQ + A KEL
Sbjct: 88 NGPTDSYAAISQVDRL----QSEPESIRKWREEQMERLEALDANSRKQEAEWKEKAIKEL 143
Query: 568 EDWYKSHEEQISKTKXXXXXXXXXXXXGSESSVEEGNEWARVSELCDFGP---RRGRDVA 738
E+WY +EQ+ KTK + S G EW RV+ LCDF P ++ +DV+
Sbjct: 144 EEWYARQDEQLQKTKANNRAAEEAFVNDIDES-SPGTEWERVARLCDFNPKSSKQAKDVS 202
Query: 739 RLRSIVL 759
R+RS+++
Sbjct: 203 RMRSVLI 209
>UniRef50_A7SZR4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 198
Score = 84.2 bits (199), Expect = 3e-15
Identities = 63/191 (32%), Positives = 84/191 (43%), Gaps = 4/191 (2%)
Frame = +1
Query: 199 DDFGDSFVEPEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFD-DFVEVPSAS 375
D F D E VDPAA+FLAREQ+ LA L ++L P GFD E P +
Sbjct: 8 DTFSD---EQAVDPAAEFLAREQDDLAELGEDL----GGPNSDVEGVGFDMSGGEEPVMN 60
Query: 376 AFDANGLLDDAPLGSTPTTVFKQEREEPEKIKIWREEQXXXXXXXXXXXXXXXXXMLQIA 555
F+ G + PT V ++ E E ++ WREE+ + A
Sbjct: 61 GFEDEG-ESSVSQQTAPTPVTRE--IEHESVRKWREEKAAQLEKMDEEEKAEIEEWREQA 117
Query: 556 KKELEDWYKSHEEQISKTKXXXXXXXXXXXXGSESSVEEGNEWARVSELCDFGP---RRG 726
KEL DWY EQ+ KTK + + G EW +V CDF P +
Sbjct: 118 HKELNDWYDRRNEQLGKTKNSNRADEESFVAERDDTSTPGTEWEKVCRACDFNPKATKNT 177
Query: 727 RDVARLRSIVL 759
+DV+R+RSI L
Sbjct: 178 KDVSRMRSIFL 188
>UniRef50_UPI0000E4601B Cluster: PREDICTED: similar to clathryn
light chain (LCA3), partial; n=4; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to clathryn light
chain (LCA3), partial - Strongylocentrotus purpuratus
Length = 169
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/105 (35%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +1
Query: 454 EPEKIKIWREEQXXXXXXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKXXXXXXX 633
EPEKI++WREEQ AKKE+ DWY EEQ K K
Sbjct: 55 EPEKIRLWREEQKEILEKKDEEADELEVEWKVSAKKEISDWYARREEQGVKAKASNRAAE 114
Query: 634 XXXXXGSESSVEEGNEWARVSELCDFGPRRG---RDVARLRSIVL 759
+ G EW R++ LCDF P+ +D+ R RSI+L
Sbjct: 115 EAFIQ-ERDEITPGQEWERIARLCDFNPKNNKNLKDITRFRSILL 158
>UniRef50_P09496 Cluster: Clathrin light chain A; n=36;
Euteleostomi|Rep: Clathrin light chain A - Homo sapiens
(Human)
Length = 248
Score = 60.9 bits (141), Expect = 3e-08
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Frame = +1
Query: 229 EVDPAADFLAREQNQLAGLEDE-----LETSAPPPAISTSTNGFDDFVE-VPSASAF-DA 387
E DPAA FLA++++++AG+E++ L+ AP P G D V+ V + + ++
Sbjct: 28 EEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVDGVMNGEYYQES 87
Query: 388 NGLLDDAPLGSTPTTVFKQEREEPEKIKIWREEQXXXXXXXXXXXXXXXXXMLQIAKKEL 567
NG D S + + EPE I+ WREEQ + A KEL
Sbjct: 88 NGPTDSYAAISQVDRL----QSEPESIRKWREEQMERLEALDANSRKQEAEWKEKAIKEL 143
Query: 568 EDWYKSHEEQISKTK 612
E+WY +EQ+ KTK
Sbjct: 144 EEWYARQDEQLQKTK 158
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/32 (46%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Frame = +1
Query: 673 GNEWARVSELCDFGP---RRGRDVARLRSIVL 759
G EW RV+ LCDF P ++ +DV+R+RS+++
Sbjct: 208 GTEWERVARLCDFNPKSSKQAKDVSRMRSVLI 239
>UniRef50_Q5DH75 Cluster: SJCHGC00953 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC00953 protein - Schistosoma
japonicum (Blood fluke)
Length = 201
Score = 58.4 bits (135), Expect = 2e-07
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Frame = +1
Query: 229 EVDPAADFLAREQNQLAGLEDELETSAPPPAIST-STNGFDD--FVEVPSASAFDANGLL 399
+ DP +DFLAREQ L L D+ + T S D +V + S + + +
Sbjct: 3 DFDPVSDFLAREQEALGDLGDDFKLDEGTAGTETRSYEPVSDASYVFLNGQSGMNGSHVG 62
Query: 400 D-----DAPLGSTPTTVFKQEREEP-EKIKIWREEQXXXXXXXXXXXXXXXXXMLQIAKK 561
D D + + + E + + WREE +++I KK
Sbjct: 63 DYLTKPDCTVSDSDHDFNRVESDSNLSSTESWREEFNKRIKTKDAEEEKKCIELMEIGKK 122
Query: 562 ELEDWYKSHEEQISK-----TKXXXXXXXXXXXXGSESSVEEGNEWARVSELCDF--GPR 720
EL DWY+++ +Q+ + G++ SV++ W + LCDF P+
Sbjct: 123 ELNDWYRNYHQQLETRSRELREKKSDLNGQLMNGGNKPSVKDSAVWESICNLCDFQSKPK 182
Query: 721 RGRDVARLRSIVL 759
D +R+RSI+L
Sbjct: 183 TAIDTSRMRSILL 195
>UniRef50_Q2PFR5 Cluster: Putative uncharacterized protein; n=7;
Eutheria|Rep: Putative uncharacterized protein - Macaca
fascicularis (Crab eating macaque) (Cynomolgus monkey)
Length = 101
Score = 57.2 bits (132), Expect = 4e-07
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +1
Query: 553 AKKELEDWYKSHEEQISKTKXXXXXXXXXXXXGSESSVEEGNEWARVSELCDFGP---RR 723
A KELE+WY +EQ+ KTK + S G EW RV+ LCDF P ++
Sbjct: 22 AIKELEEWYARQDEQLQKTKANNRAAEEAFVNDIDES-SPGTEWERVARLCDFNPKSSKQ 80
Query: 724 GRDVARLRSIVL 759
+DV+R+RS+++
Sbjct: 81 AKDVSRMRSVLI 92
>UniRef50_P90961 Cluster: Clathrin light chain protein 1; n=2;
Caenorhabditis|Rep: Clathrin light chain protein 1 -
Caenorhabditis elegans
Length = 226
Score = 48.0 bits (109), Expect = 3e-04
Identities = 57/216 (26%), Positives = 86/216 (39%), Gaps = 42/216 (19%)
Frame = +1
Query: 235 DPAADFLAREQNQLAGLE-----------DELETSAPPPAISTSTNGF----DDFVEV-- 363
DP ADFLAREQN A + D E AP PA+ D+ V
Sbjct: 3 DPVADFLAREQNLFADFDGAPPAAAAANPDAPEADAPAPALDDDFGDLQIAGDEPPPVVH 62
Query: 364 PSASAFDANGLLDD---APL-------------------GST-PTTVFKQ-EREEPEKIK 471
P+ S D +GL+DD AP GS P+ + R E EKI+
Sbjct: 63 PTDSGVDLDGLVDDNAAAPAIVVPAVEPMVNGNHSASSGGSKGPSPILSTVPRIEAEKIR 122
Query: 472 IWREEQXXXXXXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKXXXXXXXXXXXXG 651
+W+ +Q + AKKELE+WYK E+ + +
Sbjct: 123 LWKAQQEQLLSKKDEAEEKKKIELRANAKKELEEWYKQREKTLQLSHDENLKNEKSNQEL 182
Query: 652 SESSVEEGNEWARVSELCD-FGPRRGRDVARLRSIV 756
+ +W V++L D + G+D++RL++++
Sbjct: 183 FAKQQDGDAQWETVNKLVDQQKSKSGKDLSRLKTLL 218
>UniRef50_Q4PEZ7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 291
Score = 46.8 bits (106), Expect = 6e-04
Identities = 30/142 (21%), Positives = 60/142 (42%), Gaps = 3/142 (2%)
Frame = +1
Query: 325 STSTNG---FDDFVEVPSASAFDANGLLDDAPLGSTPTTVFKQEREEPEKIKIWREEQXX 495
S +TNG DD ++ SA A + ++ + S P+ +++ EEPE ++ WRE Q
Sbjct: 119 SANTNGGSYHDDADDLMSARAAAPSRVIPTSVPASQPSYSYEEPTEEPEAVRQWRETQKD 178
Query: 496 XXXXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKXXXXXXXXXXXXGSESSVEEG 675
+ A+++++++Y + + K + EG
Sbjct: 179 AIAKRDAEDERKKAEAISKAEQDIDNFYAEYNAKKEKNIAANKENEAKFHEERTRELAEG 238
Query: 676 NEWARVSELCDFGPRRGRDVAR 741
W RV+++ D + + +AR
Sbjct: 239 TTWDRVTKMVDLKNSQSKTIAR 260
Score = 34.7 bits (76), Expect = 2.5
Identities = 30/77 (38%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 202 DFGDSFVEPEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAF 381
DFG+S +P DP ADFLARE+ L D+ + + DDF SA+AF
Sbjct: 4 DFGES--KPS-DPTADFLAREREAAGVLSDDADLFGSSNTAGIGASA-DDFER--SATAF 57
Query: 382 DANGLLDDA-PLGSTPT 429
A L DD P S P+
Sbjct: 58 PA--LDDDGLPAASAPS 72
>UniRef50_Q9USP6 Cluster: Clathrin light chain; n=1;
Schizosaccharomyces pombe|Rep: Clathrin light chain -
Schizosaccharomyces pombe (Fission yeast)
Length = 229
Score = 44.4 bits (100), Expect = 0.003
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 15/203 (7%)
Frame = +1
Query: 196 MDDFGDSFVEPEVDPA---ADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDD----F 354
++DF D V VD + DFL RE+ L + ET A+ N + F
Sbjct: 7 LEDFDDGLVTAPVDDSKNNTDFLEREKLALGEDAGQFETPEDKDALLNFENDSEAEQTRF 66
Query: 355 VE--VPSASAFDANGLLD--DAP-LGSTPTTVFKQEREEPEKIKIWREEQXXXXXXXXXX 519
+ P + A+G AP +G + E +PE ++ W+E+Q
Sbjct: 67 EQNFPPIDAEMQASGTFSAPKAPYMGQAEVHPPEDESGDPEPVRKWKEDQMKRIQERDES 126
Query: 520 XXXXXXXMLQIAKKELEDWYKSHEEQISKTKXXXXXXXXXXXXGSESSVEEGNEWARVSE 699
++ A+K ++D+Y++ ++ K +ES W R+ +
Sbjct: 127 SKKLRESNIEKARKAIDDFYENFNDKRDKVIAKSRKEQEKLLEENESKSTGTTSWERILK 186
Query: 700 LCDFGPR---RGRDVARLRSIVL 759
L D + GR R R +++
Sbjct: 187 LIDLSDKPEAHGRSTERFRELLI 209
>UniRef50_A1CHU7 Cluster: Clathrin light chain; n=16;
Pezizomycotina|Rep: Clathrin light chain - Aspergillus
clavatus
Length = 246
Score = 41.9 bits (94), Expect = 0.017
Identities = 21/101 (20%), Positives = 40/101 (39%)
Frame = +1
Query: 406 APLGSTPTTVFKQEREEPEKIKIWREEQXXXXXXXXXXXXXXXXXMLQIAKKELEDWYKS 585
AP T + + EEPE ++ WRE + + A+++++D+Y S
Sbjct: 109 APFPPTGYASYGEPSEEPEPVREWRERRDAEITRRAEISNEKKEATINKAREDIDDFYVS 168
Query: 586 HEEQISKTKXXXXXXXXXXXXGSESSVEEGNEWARVSELCD 708
+ + K + E + G W R+++L D
Sbjct: 169 YNNKTDKLRAQTRADAEQFLANREDTSAGGTSWERIAKLVD 209
>UniRef50_Q7SGU9 Cluster: Putative uncharacterized protein
NCU03220.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU03220.1 - Neurospora crassa
Length = 1627
Score = 38.7 bits (86), Expect = 0.15
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +1
Query: 259 REQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTT 432
R QNQ L+ L+T PPPA+ + G P+A A N L+ +P GS+P T
Sbjct: 108 RSQNQDYDLDYALDTGPPPPAVPEAPTGPPMSYRYPAAMAEQQNSYLNSSP-GSSPLT 164
>UniRef50_P41996 Cluster: Cytokinesis protein B0280.5 precursor;
n=2; Caenorhabditis elegans|Rep: Cytokinesis protein
B0280.5 precursor - Caenorhabditis elegans
Length = 524
Score = 36.7 bits (81), Expect = 0.62
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 262 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAP 411
EQNQ GL++ L P + + NG D E PS+ F+ L+ D P
Sbjct: 399 EQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448
>UniRef50_A4S4M3 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 408
Score = 33.9 bits (74), Expect = 4.4
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 277 AGLEDELETSA--PPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTTVFKQER 450
AG ED ++ A PPP T T+G ++ VEV + ++ AP+GS P V Q R
Sbjct: 233 AGDEDGSDSEALPPPPMPPTGTSGGNE-VEVAPPRVTETTTVVRRAPVGSMPRVVPVQRR 291
Query: 451 EEP 459
P
Sbjct: 292 PPP 294
>UniRef50_Q9ZHL0 Cluster: Large supernatant protein 2; n=4;
Haemophilus ducreyi|Rep: Large supernatant protein 2 -
Haemophilus ducreyi
Length = 4919
Score = 33.5 bits (73), Expect = 5.8
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Frame = +1
Query: 205 FGDSFVEPEVDPAADFLAREQNQLAGLEDELETSAP---PPAISTSTNGFDDFVEVPSAS 375
+G PE A+ A E Q +G + ++ P PPA+ T D EVPS
Sbjct: 2674 YGTINKSPEAIARANAKADEAIQASGYDPRIKPVVPEDAPPALPPRTQSLIDSTEVPSYR 2733
Query: 376 AFDANGLLDDAPLGSTPTTV-FKQEREEP 459
+ AN DDA P+ + K +EP
Sbjct: 2734 SALANVKFDDASPWPQPSALRSKAFADEP 2762
>UniRef50_Q82DY7 Cluster: Putative uncharacterized protein; n=2;
Streptomyces|Rep: Putative uncharacterized protein -
Streptomyces avermitilis
Length = 471
Score = 33.5 bits (73), Expect = 5.8
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = -3
Query: 673 LPPHYFQILELVLALHSCWQL*FWKSVLHVICTS-PPVLSWLSEAFLASFVLPQHLSLLI 497
LPP +F + +VLA+ + W+ V ++ PP +W S+A+ + L +L +
Sbjct: 195 LPPFWFWGVFVVLAMMIHGWMPGWEIVYWIVPVGDPPGNAWGSQAYEILWYLRTYLWFVW 254
Query: 496 FSFVLLAIF*SSQVPHVLV*ILLLEWIPM 410
S VLL +F + +P +LLL +P+
Sbjct: 255 LSPVLLWVFRKAPIP-----VLLLSLVPI 278
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,493,358
Number of Sequences: 1657284
Number of extensions: 14194792
Number of successful extensions: 44842
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 42907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44786
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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