Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0100
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   4.6  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   6.1  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = +2

Query: 308 LRPLPFRRLQTGLTILSKYPVHQHLMLTVCWMMLHWDPLQQQYSN 442
           L+ L  R+++  L  L  + ++   +LT+C+ + +W   +QQY +
Sbjct: 87  LKLLKGRKIRKNLYYLLLFVINVLYVLTLCYAVYYW---RQQYED 128


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 196 MDDFGDSFVEPEVDPAADFLAREQNQL 276
           +D FG  + E  + P    ++R+QN L
Sbjct: 472 VDQFGAEWAETTIIPKVLAMSRDQNYL 498


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +1

Query: 373 SAFDA-NGLLDDA--PLGSTPTTVFKQEREEPEKIK 471
           + FD  N  L+D   PLG + +  FKQ+ EE   +K
Sbjct: 26  TVFDIPNDYLNDKYKPLGVSLSNRFKQDAEETVPVK 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,244
Number of Sequences: 336
Number of extensions: 3583
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)