Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0100
         (759 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       29   0.16 
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    27   0.48 
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    27   0.83 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.5  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   4.4  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   7.7  

>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 29.1 bits (62), Expect = 0.16
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +1

Query: 355 VEVPSASAFDANGLLDDAPLGSTPTTVFKQEREEPEKIKI 474
           +E  +  A DA+  LDDA +  TP ++ + + E+PEK+ +
Sbjct: 191 MEAMNEVAADAD--LDDAKMKKTPDSIDRVDHEQPEKMSL 228


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 0.48
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
 Frame = +2

Query: 299 KPVLRPLPFRRLQTGLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNK---NVRNLR 463
           +PV+      +L  GLT++    V +   L++T  W+ L W+ +  ++++     VR+LR
Sbjct: 23  RPVVNESDPLQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNVRWNSSEYGGVRDLR 82


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +2

Query: 299 KPVLRPLPFRRLQTGLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNK---NVRNLR 463
           +PV+      +L  GLT++    V +   L++T  W+ L W+ +  +++      VR+LR
Sbjct: 55  RPVVNESDPLQLSFGLTLMQIIDVDEKNQLLVTNIWLKLEWNDMNLRWNTSEYGGVRDLR 114


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 246 CCWIDLRFNETVSKII 199
           CCW+ L+F E V+ I+
Sbjct: 790 CCWVWLKFQEWVAFIV 805


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 73  CQFIFTIDCTLIC*FSHHFRQRV 141
           CQF F + C  +C   +H+ + V
Sbjct: 114 CQFAFDLKCDSVCVNPYHYERVV 136


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 458 GSSRSCLNTVVGVDPNGASSNRPLASNAD 372
           G SRS ++  +  +  G S+ RP  + AD
Sbjct: 33  GRSRSFVDNAIRSEATGKSTGRPRKTTAD 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,404
Number of Sequences: 2352
Number of extensions: 14942
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)