Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0099
(387 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 25 0.26
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 25 0.35
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 24 0.46
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 1.1
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 1.8
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 4.3
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 21 5.6
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 20 7.4
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 20 7.4
AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory recept... 20 7.4
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 20 7.4
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 20 9.8
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 20 9.8
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 20 9.8
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 20 9.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 20 9.8
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 20 9.8
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 25.0 bits (52), Expect = 0.26
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 261 RATCSEMFRMQRSYAYKECS 320
+ATC ++FRM++S A + S
Sbjct: 891 KATCEKLFRMKKSSALRPAS 910
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 24.6 bits (51), Expect = 0.35
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 157 SPIGPDELPPPYQQVGMPMVS 219
SP ++ PPP Q+G+ MV+
Sbjct: 426 SPASMNQTPPPTAQMGLDMVT 446
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 24.2 bits (50), Expect = 0.46
Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -3
Query: 193 DMAEATHRAQLGRLCS-HHHMRPL 125
+ A T A LG++C+ HHH+ L
Sbjct: 209 NFATKTQSAVLGKICTLHHHLSKL 232
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -3
Query: 199 LVDMAEATHRAQLGRLCS-HHHMRPL 125
L+ M LG++C+ HHH+ L
Sbjct: 839 LIKMETKAQSVALGKICTLHHHLSKL 864
Score = 21.8 bits (44), Expect = 2.4
Identities = 8/14 (57%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
Frame = -3
Query: 163 LGRLCS-HHHMRPL 125
LGR+C+ HHH+ L
Sbjct: 575 LGRICTLHHHLSKL 588
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.2 bits (45), Expect = 1.8
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 211 MVSCRVCQALIDIRGKKEQHVVKCSECKE 297
+++C+VC + H+VK S KE
Sbjct: 547 VLTCKVCDQAFSSLKELSNHMVKNSHYKE 575
Score = 19.8 bits (39), Expect = 9.8
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +1
Query: 256 KKEQHVVKCSECKEATP 306
++ ++V+KC CK++ P
Sbjct: 372 EQAKNVLKCVWCKQSFP 388
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.0 bits (42), Expect = 4.3
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 159 GDCAHIITCDLFNSQQSLIFTLAVPHC 79
GDC ++ CD NS + LA C
Sbjct: 49 GDCRDVVRCDK-NSDNNGATRLASVRC 74
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 20.6 bits (41), Expect = 5.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -1
Query: 276 HYMLLFFPTNVNQCLAHSARDHRHPYLLIW 187
++ +L PT V + +D R L++W
Sbjct: 124 NFAILIIPTCVAMFIVPYFQDRREMPLIVW 153
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 20.2 bits (40), Expect = 7.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 85 GDSQSENQALLRIEEVACDD 144
G N+A+LRIE V +D
Sbjct: 365 GHPIDHNEAVLRIESVRKED 384
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 20.2 bits (40), Expect = 7.4
Identities = 9/36 (25%), Positives = 14/36 (38%)
Frame = -3
Query: 190 MAEATHRAQLGRLCSHHHMRPLQFSAKLDFHFGCPP 83
+ E + + R+C + RP L H G P
Sbjct: 242 LEEDNQKPNVCRICGKSYARPSTLKTHLRTHSGEKP 277
>AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory receptor
candidate 33 protein.
Length = 321
Score = 20.2 bits (40), Expect = 7.4
Identities = 8/27 (29%), Positives = 11/27 (40%)
Frame = -2
Query: 290 HSEHFTTCCSFFPRMSISAWHTRQETI 210
HS S + R+ W R ET+
Sbjct: 150 HSTLLLMILSRYQRLKAQLWQNRYETV 176
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 20.2 bits (40), Expect = 7.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 144 IITCDLFNSQQSLIFTLAVPHCGFLQKFYTIM 49
I C LFN +L+F + CG + IM
Sbjct: 341 ITACRLFNIDNALLFAI----CGSAFSYLFIM 368
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 19.8 bits (39), Expect = 9.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 155 SPQLGPMSCL 184
SPQL PMS L
Sbjct: 476 SPQLSPMSSL 485
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 19.8 bits (39), Expect = 9.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 292 KEATPIKNAPPGKKYVRC 345
+ ++P +AP G VRC
Sbjct: 90 RSSSPQTSAPTGPPIVRC 107
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 19.8 bits (39), Expect = 9.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 300 YAYKECSARQEVCSVPLQLPTNLQV 374
YA+ + S + + SV P NL V
Sbjct: 146 YAFGKFSCKVMIQSVSFAFPINLSV 170
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 19.8 bits (39), Expect = 9.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 300 YAYKECSARQEVCSVPLQLPTNLQV 374
YA+ + S + + SV P NL V
Sbjct: 379 YAFGKFSCKVMIQSVSFAFPINLSV 403
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 19.8 bits (39), Expect = 9.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 300 YAYKECSARQEVCSVPLQLPTNLQV 374
YA+ + S + + SV P NL V
Sbjct: 379 YAFGKFSCKVMIQSVSFAFPINLSV 403
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 19.8 bits (39), Expect = 9.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 130 VACDDVSTIS 159
V CDDVS++S
Sbjct: 28 VDCDDVSSVS 37
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,087
Number of Sequences: 336
Number of extensions: 2478
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8119573
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -