Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0099
(387 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024859-26|AAK29977.2| 300|Caenorhabditis elegans Hypothetical... 100 4e-22
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 31 0.37
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 31 0.37
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z37139-6|CAB63431.2| 591|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical pr... 30 0.65
AL021571-3|CAC70102.2| 344|Caenorhabditis elegans Hypothetical ... 29 1.5
AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical ... 29 1.5
Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical pr... 28 2.6
AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative tran... 28 2.6
Z73971-9|CAH04730.1| 522|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z73971-8|CAA98250.1| 488|Caenorhabditis elegans Hypothetical pr... 27 6.1
AY532645-1|AAS21318.1| 522|Caenorhabditis elegans egg laying de... 27 6.1
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 27 6.1
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z71267-8|CAL44974.1| 162|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical pr... 26 8.1
AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical ... 26 8.1
AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in ... 26 8.1
AF016451-7|AAB66003.2| 312|Caenorhabditis elegans Serpentine re... 26 8.1
>AC024859-26|AAK29977.2| 300|Caenorhabditis elegans Hypothetical
protein Y71H2AM.2 protein.
Length = 300
Score = 100 bits (239), Expect = 4e-22
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +1
Query: 214 VSCRVCQALIDIRGKKEQHVVKCSECKEATPIKNAPPGKKYVRCPCNCLLICKSSSQR 387
V CRVC + + G+ +QHVVKC C EATPI+ APPGKKYVRCPCNCLLICK+SS R
Sbjct: 59 VLCRVCDVAVSLEGRNQQHVVKCHSCDEATPIRPAPPGKKYVRCPCNCLLICKASSTR 116
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 30.7 bits (66), Expect = 0.37
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 91 SQSENQALLRIEEVACDDVSTISPIGPDELPPP 189
SQSE++ R +++ D VS S PD LPPP
Sbjct: 276 SQSESRRSSRTDKMEVDQVSGASKRKPDGLPPP 308
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 30.7 bits (66), Expect = 0.37
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 91 SQSENQALLRIEEVACDDVSTISPIGPDELPPP 189
SQSE++ R +++ D VS S PD LPPP
Sbjct: 276 SQSESRRSSRTDKMEVDQVSGASKRKPDGLPPP 308
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 30.7 bits (66), Expect = 0.37
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 91 SQSENQALLRIEEVACDDVSTISPIGPDELPPP 189
SQSE++ R +++ D VS S PD LPPP
Sbjct: 276 SQSESRRSSRTDKMEVDQVSGASKRKPDGLPPP 308
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 30.7 bits (66), Expect = 0.37
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 91 SQSENQALLRIEEVACDDVSTISPIGPDELPPP 189
SQSE++ R +++ D VS S PD LPPP
Sbjct: 276 SQSESRRSSRTDKMEVDQVSGASKRKPDGLPPP 308
>Z37139-6|CAB63431.2| 591|Caenorhabditis elegans Hypothetical
protein C14B1.10 protein.
Length = 591
Score = 30.7 bits (66), Expect = 0.37
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 202 GMPMVSCRVCQALIDIRGKKEQHVVKC 282
G+ + C +C L DI KK+ HV +C
Sbjct: 410 GLLKIGCDMCMGLCDIARKKDCHVARC 436
>Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical
protein R10E4.4 protein.
Length = 759
Score = 29.9 bits (64), Expect = 0.65
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Frame = +1
Query: 172 DELPPPYQQVGMPMVS-----CRVCQALIDIRGKKEQHVVKCSECKEATPIKNAPPGKKY 336
DE P +QV VS + A +R K + ++C +CK P + PG +
Sbjct: 131 DEYPTSLRQVKSAQVSQVVKISGIIVAAAQVRSKATKVTLQCRQCKHTIPDVSIKPGLEG 190
Query: 337 VRCPCNCLLICKSSSQR 387
P C + QR
Sbjct: 191 FALPRTCAAPQQGQMQR 207
>AL021571-3|CAC70102.2| 344|Caenorhabditis elegans Hypothetical
protein T19A6.4 protein.
Length = 344
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 320 GAFFIGVASLHSEHFTTCCSFFPRMSISAW 231
G FFIG L CSF P + +SAW
Sbjct: 278 GGFFIGNQKLSQTISYPICSFAPGLIVSAW 307
>AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical
protein R02F11.1 protein.
Length = 176
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = +1
Query: 271 VVKCSECKEATPIKNAPPG----KKYVRCPCNCLLICKSSSQ 384
V+ + KEA I+ A K+ CP NC C SSSQ
Sbjct: 19 VLNAEDAKEAPEIREANSTVFRQKRQFGCPSNCYSSCSSSSQ 60
>Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical
protein Y53C12B.5a protein.
Length = 290
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 KKEQHVVKCSECKEATPIKNAPPGKKYVRCPC-NCLLI 366
+K + +C E P K P +Y++CPC C ++
Sbjct: 23 EKNYYCQRCLNHGELKPRKGHKPDCRYLKCPCRECTMV 60
>AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative
transcription factor MAB-3 protein.
Length = 290
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 KKEQHVVKCSECKEATPIKNAPPGKKYVRCPC-NCLLI 366
+K + +C E P K P +Y++CPC C ++
Sbjct: 23 EKNYYCQRCLNHGELKPRKGHKPDCRYLKCPCRECTMV 60
>Z73971-9|CAH04730.1| 522|Caenorhabditis elegans Hypothetical
protein C50H2.2a protein.
Length = 522
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 311 FIGVASLHSEHFTTCCSFFPRMSISAWH 228
F+G + EH T CSF +S W+
Sbjct: 259 FVGTGEIFGEHILTDCSFILVPVLSLWN 286
>Z73971-8|CAA98250.1| 488|Caenorhabditis elegans Hypothetical
protein C50H2.2b protein.
Length = 488
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 311 FIGVASLHSEHFTTCCSFFPRMSISAWH 228
F+G + EH T CSF +S W+
Sbjct: 225 FVGTGEIFGEHILTDCSFILVPVLSLWN 252
>AY532645-1|AAS21318.1| 522|Caenorhabditis elegans egg laying
defective EGL-47A protein.
Length = 522
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 311 FIGVASLHSEHFTTCCSFFPRMSISAWH 228
F+G + EH T CSF +S W+
Sbjct: 259 FVGTGEIFGEHILTDCSFILVPVLSLWN 286
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 26.6 bits (56), Expect = 6.1
Identities = 11/40 (27%), Positives = 15/40 (37%)
Frame = +1
Query: 229 CQALIDIRGKKEQHVVKCSECKEATPIKNAPPGKKYVRCP 348
C +G + + KCSEC P G +CP
Sbjct: 1938 CDCKPGFKGLRCEQETKCSECSNEAKCIKKPSGTVICQCP 1977
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 79 TMGDSQSENQAL-LRIEEVACDDVSTISPIGPDELPPP 189
T G ++S++ AL + + D V+ SP+ P PPP
Sbjct: 606 TDGPNESQSTALPQQTTDAPVDPVTEASPLNPQPPPPP 643
>Z71267-8|CAL44974.1| 162|Caenorhabditis elegans Hypothetical
protein W01A8.8 protein.
Length = 162
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 295 EATPIKNAPPGKKYVRCPCNCLL 363
++T K P G+K+V C NCL+
Sbjct: 60 QSTLDKFTPKGRKFVGCSTNCLV 82
>Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical
protein K01C8.2 protein.
Length = 389
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 130 VACDDVSTISPIGPDELPPPYQQVGMPMVSCRVCQAL 240
V C ST S IG + P YQQ+ +C + A+
Sbjct: 223 VCCGQGSTGSTIGCADGRPVYQQIAGQTYTCEITSAI 259
>AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical
protein F52H2.7 protein.
Length = 875
Score = 26.2 bits (55), Expect = 8.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 376 MTCKLVGNCKGTEHTSCL 323
+TC+L+G C H SC+
Sbjct: 245 LTCRLIGTCAKIVHESCV 262
>AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform c protein.
Length = 1036
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/22 (45%), Positives = 19/22 (86%)
Frame = -2
Query: 179 NSSGPIGEIVLTSSHATSSILS 114
+S+ P+G+ +L+SS++TSS L+
Sbjct: 54 SSAPPLGDAILSSSNSTSSYLT 75
>AF016451-7|AAB66003.2| 312|Caenorhabditis elegans Serpentine
receptor, class t protein64 protein.
Length = 312
Score = 26.2 bits (55), Expect = 8.1
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 180 QLIGPNWGDCAHIITCDLFNSQQSLIF--TLAVPHCGFLQKFYTIMQMTR 37
+L GPNW + DLF S + ++ TLA+ ++ Y+I + R
Sbjct: 157 ELTGPNWAYDMKVKYADLFASLELVLCFPTLALSFISYILIIYSIYKKRR 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,498,341
Number of Sequences: 27780
Number of extensions: 235942
Number of successful extensions: 625
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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