Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0098
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0) 37 0.013
SB_22957| Best HMM Match : EGF (HMM E-Value=7e-39) 35 0.071
SB_2152| Best HMM Match : EGF (HMM E-Value=0) 35 0.071
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 34 0.12
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_7266| Best HMM Match : UPAR_LY6 (HMM E-Value=0.015) 34 0.12
SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0) 33 0.16
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_373| Best HMM Match : Somatomedin_B (HMM E-Value=3.5) 33 0.28
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 32 0.38
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31) 31 0.66
SB_50806| Best HMM Match : EGF_CA (HMM E-Value=1e-27) 31 0.66
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_52148| Best HMM Match : EGF (HMM E-Value=0) 31 0.87
SB_50164| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 31 0.87
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 31 0.87
SB_9160| Best HMM Match : EGF (HMM E-Value=0.0019) 31 0.87
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) 31 0.87
SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027) 31 1.1
SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45) 31 1.1
SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41) 31 1.1
SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012) 30 1.5
SB_32734| Best HMM Match : Keratin_B2 (HMM E-Value=0.14) 30 1.5
SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.5
SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15) 30 1.5
SB_1668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24) 30 2.0
SB_20014| Best HMM Match : EGF_CA (HMM E-Value=1.6e-18) 30 2.0
SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08) 29 2.7
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_786| Best HMM Match : EGF (HMM E-Value=0) 29 2.7
SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 29 2.7
SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0) 29 2.7
SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29) 29 3.5
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.5
SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 29 3.5
SB_6892| Best HMM Match : TSP_3 (HMM E-Value=2.94273e-44) 29 3.5
SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.5
SB_35310| Best HMM Match : Cadherin (HMM E-Value=5.9e-23) 29 3.5
SB_49765| Best HMM Match : EGF (HMM E-Value=0) 29 4.6
SB_49295| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_39796| Best HMM Match : VWA (HMM E-Value=0) 29 4.6
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 6.1
SB_15247| Best HMM Match : Hormone_5 (HMM E-Value=0.98) 28 6.1
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 28 6.1
SB_12520| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 28 6.1
SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0) 28 6.1
SB_4669| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_58969| Best HMM Match : Avidin (HMM E-Value=3.7) 28 8.1
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 28 8.1
SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_43808| Best HMM Match : DNA_binding_1 (HMM E-Value=1.1e-32) 28 8.1
SB_43806| Best HMM Match : DNA_binding_1 (HMM E-Value=1.9e-31) 28 8.1
SB_41393| Best HMM Match : WSC (HMM E-Value=0.06) 28 8.1
SB_33236| Best HMM Match : DNA_binding_1 (HMM E-Value=1.1e-32) 28 8.1
SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062) 28 8.1
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_32940| Best HMM Match : EGF (HMM E-Value=0) 28 8.1
SB_31406| Best HMM Match : DNA_binding_1 (HMM E-Value=1.9e-31) 28 8.1
SB_19665| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 28 8.1
SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 506 DEPCEVGCVCKRGFRRADNGTCVDERDCESQLCSVNEQY 622
+ PC GC C G DNGTCV C+ C N +Y
Sbjct: 1245 ERPCVSGCYCPDGLIMHDNGTCVQSMQCQ---CKHNNKY 1280
Score = 31.9 bits (69), Expect = 0.50
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 148 EEKCEYGCACKIGYLRDENGTCIPQDKC 231
E C GC C G + +NGTC+ +C
Sbjct: 1245 ERPCVSGCYCPDGLIMHDNGTCVQSMQC 1272
Score = 29.5 bits (63), Expect = 2.7
Identities = 35/141 (24%), Positives = 49/141 (34%), Gaps = 13/141 (9%)
Frame = +1
Query: 40 CTATCPE--NEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKC--EYGCACKIGYLRDENG 207
C +TC + N TC C EK + + +E KC + C C G + G
Sbjct: 1137 CPSTCDDLANVTDTCPSRRCVEGCYCEKEGEL---MNNEHKCVDKTQCPCYYGDTMYKYG 1193
Query: 208 TCIPQDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKTQSTEL---------CEP 360
I +D+C C + +C C T S+C L C
Sbjct: 1194 E-IRKDRCNNCTCKGGVF--DCTNVDCEAMCLTRGLVYSDCGITCENLHPINGGERPCVS 1250
Query: 361 GCVCEGGFLRSKNGTGTMSRE 423
GC C G + NGT S +
Sbjct: 1251 GCYCPDGLIMHDNGTCVQSMQ 1271
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 37.5 bits (83), Expect = 0.010
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Frame = +1
Query: 163 YGCACKIGYLRDENGT-CIPQDKCPTVPCPVNE--------YFTNCAKGMCRQENCTELG 315
Y C C GY+ + T C+ D+C T+P N+ Y +C G + T
Sbjct: 451 YSCECSAGYVLSSDFTSCLDVDECLTIPAICNQTCSNIPGSYVCSCVTGYYLGVDNTTCL 510
Query: 316 KLSECKTQSTELCEPGCVCE-GGFLRS 393
L EC T + CE C G F+ S
Sbjct: 511 DLDECSTNANN-CEQRCTNSLGSFICS 536
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 458 NSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRR-ADNGTCVDERDCES 595
N K KY SQ C + C C RG+ +D TC+D +C S
Sbjct: 751 NECKSSIKYCSQGCKNLYGT-FSCFCYRGYALDSDKRTCIDVEECSS 796
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +1
Query: 106 CIEKNDIIFCQLVDEEKCE-----YGCACKIGY-LRDENGTCIPQDKCPT 237
C++ ++ + + + C Y C+C GY L +N TC+ D+C T
Sbjct: 468 CLDVDECLTIPAICNQTCSNIPGSYVCSCVTGYYLGVDNTTCLDLDECST 517
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +2
Query: 461 SDKCEYKYR--SQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDC 589
S C Y+ SQ+C S C C G+ +G CVD +C
Sbjct: 272 SRACAYQLSNCSQTC-SQVDSIYQCTCFEGYHLTSDGQCVDINEC 315
>SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1678
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Frame = +2
Query: 461 SDKCEYKYRSQSCPSDEPC-----EVGCVCKRGFRRADNGTCVDERDCES--QLCSVN 613
SD E + CP+D C C CKRG+ D+ CVD +C +CS N
Sbjct: 784 SDIDECRRNIYDCPADSQCINTYGSYKCSCKRGYAHNDSNVCVDVNECTETPYVCSGN 841
Score = 31.1 bits (67), Expect = 0.87
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 163 YGCACKIGYLRDENGTCIPQDKCPTVP 243
Y C+CK GY +++ C+ ++C P
Sbjct: 809 YKCSCKRGYAHNDSNVCVDVNECTETP 835
>SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 651
Score = 37.1 bits (82), Expect = 0.013
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Frame = +1
Query: 169 CACKIGYLRDENG-TCIPQDKCPT-VPCPVN------EYFTNCAKGMCRQENCTELGKLS 324
CAC GY + +G TC+ D+C C + ++ +C G Q + T ++
Sbjct: 46 CACDAGYDLEADGVTCVDIDECKKGAKCQYSCTNTNGSFYCSCRHGYALQADNTTCADIN 105
Query: 325 ECKTQSTELCEPGCV-CEGGF 384
EC T S C CV EGGF
Sbjct: 106 ECVT-SNGNCSHTCVNWEGGF 125
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 464 DKCEYKYRSQSCPSDEPCEVGCVCKRGFR-RADNGTCVDERDC 589
D+C+ + Q ++ C C+ G+ +ADN TC D +C
Sbjct: 65 DECKKGAKCQYSCTNTNGSFYCSCRHGYALQADNTTCADINEC 107
>SB_22957| Best HMM Match : EGF (HMM E-Value=7e-39)
Length = 201
Score = 34.7 bits (76), Expect = 0.071
Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 19/138 (13%)
Frame = +1
Query: 43 TATCPENEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQ 222
T CP+ G P + + N+ CQ +Y C C G+ NG Q
Sbjct: 54 TCACPQGYTGWNCNGTLHPCETLNCNNGGTCQKQSNASDDYVCVCVTGF----NGIRCEQ 109
Query: 223 --DKCPTVPCP-------VNEYFTNCAKGMCRQENCTELGKLSECKTQ-----STELCEP 360
D C ++PC VN + NC C ++ECK Q + C+
Sbjct: 110 NIDDCASLPCKHGKCVDGVNNHTCNCPGSGYEGPKCDV--DINECKVQPGPCLNGGTCDN 167
Query: 361 -----GCVCEGGFLRSKN 399
GC C+ G+ R KN
Sbjct: 168 YLGTYGCSCKAGY-RGKN 184
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = +2
Query: 449 PNCNSDKCEYKYRSQSCPSDEPCE-----VGCVCKRGFRRADNGTCVDERD 586
P C+ D E K + C + C+ GC CK G+R + +DE D
Sbjct: 143 PKCDVDINECKVQPGPCLNGGTCDNYLGTYGCSCKAGYRGKNCQENIDECD 193
>SB_2152| Best HMM Match : EGF (HMM E-Value=0)
Length = 1603
Score = 34.7 bits (76), Expect = 0.071
Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 19/138 (13%)
Frame = +1
Query: 43 TATCPENEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQ 222
T CP+ G P + + N+ CQ +Y C C G+ NG Q
Sbjct: 78 TCACPQGYTGWNCNGTLHPCETLNCNNGGTCQKQSNASDDYVCVCVTGF----NGIRCEQ 133
Query: 223 --DKCPTVPCP-------VNEYFTNCAKGMCRQENCTELGKLSECKTQ-----STELCEP 360
D C ++PC VN + NC C ++ECK Q + C+
Sbjct: 134 NIDDCASLPCKHGKCVDGVNNHTCNCPGSGYEGPKCDV--DINECKVQPGPCLNGGTCDN 191
Query: 361 -----GCVCEGGFLRSKN 399
GC C+ G+ R KN
Sbjct: 192 YLGTYGCSCKAGY-RGKN 208
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = +2
Query: 449 PNCNSDKCEYKYRSQSCPSDEPCE-----VGCVCKRGFRRADNGTCVDERD 586
P C+ D E K + C + C+ GC CK G+R + +DE D
Sbjct: 167 PKCDVDINECKVQPGPCLNGGTCDNYLGTYGCSCKAGYRGKNCQENIDECD 217
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Frame = +1
Query: 163 YGCACKIGYLRDENGTCIPQDKCPTVPCP--------VNEYFTNCAKGMCRQENCTELGK 318
+ CACK G+ + GT I D+C + PC +N + C G ++ TE+ +
Sbjct: 1130 FACACKPGFTGKDCGTEI--DECASNPCKNGATCTDRINGFTCTCKPGFTDKDCGTEIDE 1187
Query: 319 LSE--CKTQST---ELCEPGCVCEGGFLRSKNGT 405
+ CK +T + C C+ GF GT
Sbjct: 1188 CASKPCKNGATCTDRINGFACACKPGFTGKDCGT 1221
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +2
Query: 413 CPVNEVYSSCRQ--PNCNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERD 586
C V +C CNS C+ SC +D C CK GF D GT +DE
Sbjct: 944 CKVGFTGKNCETNIDECNSSPCK---NGGSC-TDRISGFTCTCKHGFTGKDCGTEIDE-- 997
Query: 587 CESQLC 604
C S+ C
Sbjct: 998 CASKPC 1003
Score = 33.1 bits (72), Expect = 0.22
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Frame = +1
Query: 163 YGCACKIGYLRDENGTCIPQDKCPTVPCP--------VNEYFTNCAKGMCRQENCTELGK 318
+ CACK G+ + GT I D+C + PC +N + C G ++ TE+ +
Sbjct: 1206 FACACKPGFTGKDCGTEI--DECASNPCKNGATCTDRINGFTCTCKPGFTGKDCGTEIDE 1263
Query: 319 LSE--CKTQST---ELCEPGCVCEGGFLRSKNGT 405
+ CK +T + C C+ GF GT
Sbjct: 1264 CASKPCKNGATCTDRINGFRCTCKPGFTGKDCGT 1297
Score = 31.1 bits (67), Expect = 0.87
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +1
Query: 169 CACKIGYLRDENGTCIPQDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKTQSTE 348
C CK GY + GT I D+C + PC +NE C NC +++EC+ ++
Sbjct: 1436 CTCKEGYTGKDCGTDI--DECSSNPC-LNE--GTCTDQGYTGPNCEV--EVNECQ---SD 1485
Query: 349 LCEPGCVCE 375
C+ G CE
Sbjct: 1486 PCQNGGTCE 1494
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 455 CNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQLC 604
C S+ C+ +C +D C CK GF D GT +DE C S+ C
Sbjct: 1378 CASNPCK---NGATC-TDRINGFACTCKPGFTGKDCGTEIDE--CASEPC 1421
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 455 CNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQLCSVNE 616
C S+ C+ +C +D+ C CK G+ D GT +DE C S C +NE
Sbjct: 1416 CASEPCK---NGANC-TDKINGFMCTCKEGYTGKDCGTDIDE--CSSNPC-LNE 1462
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 527 CVCKRGFRRADNGTCVDERDCESQLC 604
C CK GF +D GT +DE C S C
Sbjct: 1018 CTCKPGFTGSDCGTEIDE--CASNPC 1041
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 527 CVCKRGFRRADNGTCVDERDCESQLC 604
C CK GF +D GT +DE C S C
Sbjct: 1322 CTCKPGFTGSDCGTEIDE--CASNPC 1345
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 455 CNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQLC 604
C S+ C+ +C +D C CK GF D GT +DE C S C
Sbjct: 1340 CASNPCK---NGATC-TDRINGFACTCKPGFTGKDCGTEIDE--CASNPC 1383
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 527 CVCKRGFRRADNGTCVDERDCESQLC 604
C CK GF D GT +DE C S+ C
Sbjct: 1056 CTCKPGFTGKDCGTEIDE--CASKPC 1079
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 527 CVCKRGFRRADNGTCVDERDCESQLC 604
C CK GF D GT +DE C S+ C
Sbjct: 1094 CACKPGFTGKDCGTEIDE--CASKPC 1117
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 464 DKCEYK-YRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQLC 604
D+C K ++ + +D C CK GF D GT +DE C S C
Sbjct: 1110 DECASKPCKNGATCTDRINGFACACKPGFTGKDCGTEIDE--CASNPC 1155
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 527 CVCKRGFRRADNGTCVDERDCESQLC 604
C CK GF D GT +DE C S+ C
Sbjct: 1170 CTCKPGFTDKDCGTEIDE--CASKPC 1193
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 464 DKCEYK-YRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQLC 604
D+C K ++ + +D C CK GF D GT +DE C S C
Sbjct: 1186 DECASKPCKNGATCTDRINGFACACKPGFTGKDCGTEIDE--CASNPC 1231
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 527 CVCKRGFRRADNGTCVDERDCESQLC 604
C CK GF D GT +DE C S+ C
Sbjct: 1246 CTCKPGFTGKDCGTEIDE--CASKPC 1269
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 202 NGTCIPQDKCPTVPCPVNEYFTNCAKGMCRQENCT--ELGKLSECK--TQSTELCEPGCV 369
NGT P+ VPCP Y N +G R+ +C E GK E T T C+PG
Sbjct: 2023 NGTYCPEGTPIPVPCPKGSY--NPYRGKAREADCVPCEGGKYCETTGLTAVTGDCKPGYY 2080
Query: 370 C 372
C
Sbjct: 2081 C 2081
>SB_7266| Best HMM Match : UPAR_LY6 (HMM E-Value=0.015)
Length = 513
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Frame = +2
Query: 434 SSCRQPNCNSD----KCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCES-Q 598
SS +C S+ +C + + C +D+ C G NG C+D ++C S +
Sbjct: 19 SSLNCHSCRSEVGFLECSHDKIEEQCKNDQSCGKYSYTYGGNDYWQNG-CIDTKECSSSE 77
Query: 599 LCSVNEQYLSCIQAVCRVEKCS 664
+C + Q +C+ C + C+
Sbjct: 78 MCLKDSQKDNCVVYCCDTDLCN 99
>SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 541
Score = 33.5 bits (73), Expect = 0.16
Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 16/116 (13%)
Frame = +1
Query: 103 KCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENG-TCIPQDKCPTVP--CP------VN 255
+C+E I + Y C C +GY + +C ++C P CP V
Sbjct: 272 ECVETPGICKTGNCTNIEGSYTCTCPVGYAPTRDSPSCSDINECKKNPELCPYGCKNFVG 331
Query: 256 EYFTNCAKGMCRQ-ENCTELGKLSE----CKTQSTELCEPG--CVCEGGFLRSKNG 402
Y C G CT++ + E C+ + + G C C G+ RSKNG
Sbjct: 332 GYRCTCPDGYRGDGRTCTDINECQERRGLCRNGACVNIDGGYVCNCNPGYKRSKNG 387
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 33.1 bits (72), Expect = 0.22
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 12/114 (10%)
Frame = +1
Query: 76 CLQGLCRPQ-KCIEKNDIIFCQLV--DEEKCEYGCACKIGYLRDENGTC-IPQDKCPTVP 243
CL C C+EK ++ Q V D ++ CAC +GY C I D C ++P
Sbjct: 859 CLSDPCLNNGTCVEKIGVVGYQCVCPDGFAGDFSCACPVGY---TGKLCEIDIDDCASMP 915
Query: 244 C--------PVNEYFTNCAKGMCRQENCTELGKLSECKTQSTELCEPGCVCEGG 381
C VN Y C + NC L ++ C T C+ G C+ G
Sbjct: 916 CGNLSTCIDHVNNYSCACVPWYTGR-NCENL--VTNCDTAP---CQNGATCKIG 963
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 163 YGCACKIGYLRDENGTCIPQDKCPTVPC 246
Y CAC +GY D+N + D+C + PC
Sbjct: 2696 YSCACAVGY-TDQN-CSVEIDECASNPC 2721
>SB_373| Best HMM Match : Somatomedin_B (HMM E-Value=3.5)
Length = 404
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +1
Query: 142 VDEEKCEYGCACKI--GYLRDENGTCIPQDKCPTVPCPVNEYFTNCAKGMCR 291
V + CE C K G + TC P DKC VP ++ C +C+
Sbjct: 278 VSKATCEGKCCGKAATGAALEHTRTCTPNDKCTYVPVKIDMMVDKCDTTVCK 329
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 32.3 bits (70), Expect = 0.38
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Frame = +1
Query: 163 YGC--ACKIGYLRDENGTCIPQDKCP------TVPCPVNE--YFTNCAKGMCRQENCTEL 312
Y C +C +G+ R G C+ D C C +E Y C KG +
Sbjct: 273 YKCLDSCSLGFKRTLEGACVGIDGCVLNNLKCDQRCGFSEQGYSCECVKGYRLAIDRQSC 332
Query: 313 GKLSECKTQSTELCEPGCV-CEGGF 384
+ EC + T C+ C+ EGG+
Sbjct: 333 VDIDECSSNQTNSCQYQCINTEGGY 357
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +1
Query: 85 GLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVPCPVNEYF 264
G C + C + + D E E C CK G+ D C QD+C PCP N
Sbjct: 1324 GTCEGKVCDFNGECVAKNNSDGET-ERTCRCKEGFEGD-GIICTDQDECLKGPCPQNAKC 1381
Query: 265 TN 270
N
Sbjct: 1382 VN 1383
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 527 CVCKRGFRRADNGTCVDERDCE 592
CVC+RGF + + G C++ +CE
Sbjct: 982 CVCRRGFTKKE-GNCINIDECE 1002
>SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31)
Length = 491
Score = 31.5 bits (68), Expect = 0.66
Identities = 26/89 (29%), Positives = 33/89 (37%), Gaps = 13/89 (14%)
Frame = +1
Query: 160 EYGCACKIGYLRDENGTCIPQDKCPTVPCP--------VNEYFTNCAKGMCRQENCTELG 315
EY C C +GY D C Q KC PC N+Y C G +NC E
Sbjct: 370 EYRCVCALGYKGDR---CDIQSKCFPNPCKNFATCTEHPNDYECTCHPGF-HGKNCDEES 425
Query: 316 KLSECKTQSTELCEPG-----CVCEGGFL 387
K ++ +C C C GF+
Sbjct: 426 KCEPNPCRNGAVCTETREKYICSCTYGFM 454
>SB_50806| Best HMM Match : EGF_CA (HMM E-Value=1e-27)
Length = 286
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +2
Query: 464 DKCEYKYRSQSCPSDEPCE-----VGCVCKRGFRRADNGTC--VDERDCESQLCSVN 613
D+C K CP++ C+ CVCK+GF +D G C +DE + CS N
Sbjct: 147 DECADK--QSRCPNNAVCKNTAGSYDCVCKKGFEMSD-GECKDIDECSLKPAKCSSN 200
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 163 YGCACKIGYLRDENGTCIPQDKCPT--VPCPVNEYFTN 270
+ C C GY RD G C ++C T C VN TN
Sbjct: 482 FTCQCAEGYERDSQGKCADVNECKTGKHDCSVNALCTN 519
Score = 31.1 bits (67), Expect = 0.87
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Frame = +2
Query: 461 SDKCEYKYRSQSCPSDEPC--EVG---CVCKRGFRRADNGTCVDERDCES--QLCSVN 613
+D E K C +E C +G C C G+ R G C D +C++ CSVN
Sbjct: 457 ADVDECKTGQVKCGENEVCANSLGSFTCQCAEGYERDSQGKCADVNECKTGKHDCSVN 514
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Frame = +1
Query: 136 QLVDEEKCEYGCACKIGYLRDENGTCIP---QDKCPTVPCPVNEYFTNCAKGMCRQENCT 306
Q+ + C + C+ +GY + C+ Q CP + C + C G C C
Sbjct: 39 QVCIDGNCTFNCSRNMGYGSCDQ-LCLQNKDQKPCPRLKCAASTCNQRCLSGGCTDVACN 97
Query: 307 ELGKLSECKTQSTEL-CEPGCVC 372
L C + T + C C
Sbjct: 98 SHTCLQTCTSNCTNMECHSNTKC 120
>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
Length = 1055
Score = 31.1 bits (67), Expect = 0.87
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 5/110 (4%)
Frame = +1
Query: 70 RTCLQGLCRPQKCIEKNDIIFCQL---VDEEKCEYGC-ACKIGYLRDENGTCIPQDKCPT 237
+ C CR C+ + D +FCQ +C+ CK+ ENG C+ +
Sbjct: 846 KRCGDAPCRHGHCVTRRDALFCQCDFGYYGAECDRRMDYCKLKPCVVENGWCVNTQQGFR 905
Query: 238 VPCPVNEYFTNC-AKGMCRQENCTELGKLSECKTQSTELCEPGCVCEGGF 384
C C K C + C G C T+ +P CVC G+
Sbjct: 906 CVCKRGYGGLRCHKKNACLPDPCAPHG---ICMTRRG---DPFCVCTEGY 949
Score = 28.7 bits (61), Expect = 4.6
Identities = 28/118 (23%), Positives = 39/118 (33%), Gaps = 6/118 (5%)
Frame = +1
Query: 61 NEERTCLQGLCRPQK-CIEKNDIIFCQLVDEEKCEYGCACKIGYLRDE---NGTCIPQDK 228
+++ CL C P C+ + FC + E C I + NG C+
Sbjct: 918 HKKNACLPDPCAPHGICMTRRGDPFC-VCTEGYTGLRCKVVINHCLSNPCLNGVCVSTSS 976
Query: 229 CPTVPCPVNEYFTNCAKGM--CRQENCTELGKLSECKTQSTELCEPGCVCEGGFLRSK 396
T C V T C M C C C + E C+C GF +K
Sbjct: 977 TYTCRCTVGFKGTRCEHAMNTCYSNPCIH----GNCLVRDDSSFE--CICHKGFTGTK 1028
>SB_50164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1780
Score = 31.1 bits (67), Expect = 0.87
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 503 SDEPCEVGCVCKRGFRRAD--NGTCVDERDCESQLCSVNEQYLSCIQAVC 646
SDE V +C +GF+R D NG V RD + CS Y C ++ C
Sbjct: 520 SDERRYVCSICSKGFKRQDHLNGHMVTHRDKKPYECS----YADCDKSYC 565
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 31.1 bits (67), Expect = 0.87
Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 2/109 (1%)
Frame = +1
Query: 49 TCPENEERTCLQGLCRPQ--KCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQ 222
+C +E R C P +C D + L DE C C R NG C P+
Sbjct: 866 SCRASEFRCQASRKCIPLSWRCDGDYDCLAPDLSDEANCSVATNCSASMFRCANGQCKPR 925
Query: 223 DKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKTQSTELCEPGCV 369
D V + F +C G ++ C S+ K T + + G V
Sbjct: 926 DW-------VCDGFDDCGDG-SDEKGCGMFVMRSDAKFSDTAIGKNGVV 966
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +1
Query: 157 CEYGCACKIGYLRDENGTC---IPQDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSE 327
C G ++ D C + +CP V CP +E+ C G C + G+ +
Sbjct: 2216 CNNGRCINAKWVCDRENDCGDNSDEARCPEVTCPAHEF--TCPNGRCVSYDFLCDGE-DD 2272
Query: 328 CKTQSTELCEPGCVCEGGFLR--SKN 399
C S EL P C G ++ SKN
Sbjct: 2273 CGDFSDELRCPPTTCVPGQVKCGSKN 2298
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 31.1 bits (67), Expect = 0.87
Identities = 31/95 (32%), Positives = 42/95 (44%)
Frame = +1
Query: 88 LCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVPCPVNEYFT 267
+C P K I KN C++ D C YG L+ N T + +D C T C V+ T
Sbjct: 1165 VCPPGK-IGKN----CEVNDPNLCRYGD----NQLQSHN-TTVKED-CNTCSC-VHGTRT 1212
Query: 268 NCAKGMCRQENCTELGKLSECKTQSTELCEPGCVC 372
C K +C +NC T S ++C G VC
Sbjct: 1213 -CTKVVCGPDNCL------NSSTVSNDICSMGSVC 1240
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = +1
Query: 49 TCPENEERTCLQGLCRPQKCIEKNDIIFCQLVDE---EKCEYGCACKIGYLRDENGTCIP 219
TC +N + +KCI+ C+ ++ + C+ G + NGTCI
Sbjct: 469 TCDQNTNECAARPCINGRKCIDLIGDYACECLEGWQGKNCDQNINDCAGQCK-HNGTCID 527
Query: 220 QDKCPTVPCPVNEYFTNC 273
Q T CP+ NC
Sbjct: 528 QLNDYTCHCPLGYTGKNC 545
>SB_9160| Best HMM Match : EGF (HMM E-Value=0.0019)
Length = 497
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 446 QPNCNSDKCEYKYRSQSC-PSDEPCEVGCVCKRGF--RRADNGTCVDERDCESQLCSVNE 616
Q C+S+ C ++ C P P E C+CK+GF +D TCV S ++
Sbjct: 118 QNGCSSNPCG---NNEICMPGGLPTEYKCICKKGFVSHSSDRLTCVSNGFTASDCQDLHS 174
Query: 617 QYLSCIQAVCRV 652
++ S A+ ++
Sbjct: 175 KFPSFPSAMYKL 186
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.1 bits (67), Expect = 0.87
Identities = 35/129 (27%), Positives = 50/129 (38%), Gaps = 20/129 (15%)
Frame = +1
Query: 40 CTATCPENEERTCLQG-----LCRPQKCIEKNDIIFCQLVDEEKCEYGC---ACKIGYLR 195
C+ C N +C G + PQ+ I DI C ++ + CE GC C+ G
Sbjct: 1140 CSVICLPNCPASCCSGHQKSAVLTPQRNI--GDIGTCSIMCKRSCEEGCPEQCCQNGCPV 1197
Query: 196 DENGTC---IPQDKCPTVPCPV--NEYFTNCAKGMCRQENCTELGKLS-------ECKTQ 339
+ +C P C TV P+ N+ +C+ E C LS C
Sbjct: 1198 ECLSSCKPHCPPRCCFTVLIPIADNQSVKEKCPAVCK-ETCKPECPLSCCLKDARGCPAT 1256
Query: 340 STELCEPGC 366
E C+PGC
Sbjct: 1257 CVEDCKPGC 1265
Score = 29.1 bits (62), Expect = 3.5
Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 8/118 (6%)
Frame = +1
Query: 40 CTATCPENEERTCLQGLCRPQKCIEKNDIIFCQL----VDEEKCEYGC---ACKIGYLRD 198
C A C E + C P C + +I C + + C C C +D
Sbjct: 1656 CPARCCTTEPLSACPATCSPDSCRPECPLICCSVCPPNCSAQSCGNFCPPKCCTSQLSKD 1715
Query: 199 ENGTCIPQDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKTQST-ELCEPGCV 369
C ++ CP V C G C + C++ L+ C T C+PGC+
Sbjct: 1716 RQKEC--KESCPKV----------CGPG-CPVQCCSD---LNICPANCTGSACKPGCI 1757
Score = 28.7 bits (61), Expect = 4.6
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
Frame = +1
Query: 40 CTATCPENEERTCLQGLCRPQKCIEKNDIIFC-QLVDEEKCEYGCACKIGYLRDENGTCI 216
C A C E+ + C P KC N + C Q + C C + L D NG
Sbjct: 1346 CPAVCSESCKPDC------PIKCCS-NALSSCPQSCSGDHCGAECPTQCCLLAD-NGQHS 1397
Query: 217 PQDKCPTVPCPVNEYFTNCAKGMC---RQENCTELGKLSECKTQSTELCEPGC 366
CP+ C + +C C Q + +EC ++ +E C+P C
Sbjct: 1398 STASCPSA-CSPSGCNPDCPARCCITVLQPLNEKHNTTAECPSECSETCKPEC 1449
>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
Length = 942
Score = 31.1 bits (67), Expect = 0.87
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Frame = +2
Query: 389 DQKTERELCPVN-----EVYSSCRQPNCNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRR 553
DQ ER C + +C++ C + C+ K Q CP ++ C + C + +
Sbjct: 384 DQTCERGKCQLRCNTRENCKQTCKEGKCLTMSCKAKNCDQECPGNQ-CRMACTSDKCRQV 442
Query: 554 ADNGTCVDERDCESQLCSVNEQYLSCIQAVCRVEKCS 664
+C E ++ C + C+ CR +KCS
Sbjct: 443 CAGRSCSMECARGTRECHQECKGGGCV-FNCRGKKCS 478
>SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1074
Score = 30.7 bits (66), Expect = 1.1
Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 3/111 (2%)
Frame = +2
Query: 326 NVKRNRQSCASRAAFVKGAS*DQKTERELCPVNEVYSSCRQPNCNSDKCEYKYRSQSCPS 505
NV R+ + S+ + +REL + E SS P + P
Sbjct: 662 NVNRSEKEMLSKTGSAVAKPAENNEDRELKSITEGSSSSNNPVASQ------------PE 709
Query: 506 DEPCEVGCVCKRGFRRADNGTCVDE---RDCESQLCSVNEQYLSCIQAVCR 649
E E+ G ADN T VDE RD + VN+Q S IQ++ R
Sbjct: 710 SEKGEISEEMSNGTAIADNRTAVDESGGRDNATTSTIVNQQGASAIQSLHR 760
>SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027)
Length = 442
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 464 DKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQLCSVNEQYLSCIQAV 643
D +Y Q C S + C + C K+ N TC+ R C S +CS +CI+A
Sbjct: 56 DVTKYDTCGQICNSAK-CNLQCAVKQEC----NQTCIAGR-CVSAVCSSRMCNQTCIRAG 109
Query: 644 CRVEKCSD 667
C++E D
Sbjct: 110 CKMECYGD 117
>SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45)
Length = 622
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Frame = +1
Query: 139 LVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVPCPVNEYFT---NC--AKGMCRQEN- 300
L DE CE G K G L D + C+ CP N + C +C EN
Sbjct: 184 LEDEFGCENGQCVKRGLLCDGDKACLDGSDEKHCSCPSNMFLCPSGECIPTTALCNNEND 243
Query: 301 CTELGKLSECKTQSTELCEPGC 366
C++ C+ + L GC
Sbjct: 244 CSDNADERNCQYANCSLNNLGC 265
>SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41)
Length = 653
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +2
Query: 482 YRSQSCPSDEPCEVGCVCKRGFRRADNGT-CVDERDCESQ 598
Y Q C + + C CKRGF NG C D +C+ Q
Sbjct: 328 YGKQDCINTDGAHK-CECKRGFTPKPNGKGCTDINECDDQ 366
>SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012)
Length = 489
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 464 DKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQLCSVNEQYLSCIQAV 643
D +Y Q C S + C + C K+ N TC+ R C S +CS +CI+A
Sbjct: 56 DVTKYDTCGQICNSAK-CNLQCAVKQEC----NQTCIAGR-CVSAVCSSRMCNQTCIRAG 109
Query: 644 CRVE 655
C++E
Sbjct: 110 CKME 113
>SB_32734| Best HMM Match : Keratin_B2 (HMM E-Value=0.14)
Length = 308
Score = 30.3 bits (65), Expect = 1.5
Identities = 29/99 (29%), Positives = 38/99 (38%)
Frame = +1
Query: 46 ATCPENEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQD 225
A C ++ CL C Q I + I C + +E CA + R G + QD
Sbjct: 133 AGCDVRQDE-CLGMSCATQSLIAR--IAGCDVRQDECLGMSCATQSLIARIA-GCDVRQD 188
Query: 226 KCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKTQS 342
+C PC A RQ+ C LG C TQS
Sbjct: 189 ECLGTPCATQPLIARIAGCDARQDEC--LG--MSCATQS 223
Score = 27.9 bits (59), Expect = 8.1
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = +1
Query: 91 CRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTC-IPQDKCPTVPCPVNEYFT 267
C Q I + I C V +++C G +C L C + QD+C PC
Sbjct: 3 CATQSLIAR--IAGCD-VRQDEC-LGMSCATQSLITRIADCDVRQDECLGTPCATQPLIA 58
Query: 268 NCAKGMCRQENCTELGKLSECKTQS 342
A RQ+ C LG C TQS
Sbjct: 59 RIAGCDARQDEC--LG--MSCATQS 79
>SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 165
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Frame = +2
Query: 473 EYKYRSQSCPSDEPC--EVG---CVCKRGFRRADNGTCVDERDCES--QLCSVN 613
E K C +E C +G C C G+ R G C D +C++ CSVN
Sbjct: 4 ECKTGQVKCGENEVCANSLGSFTCQCAEGYERNSQGKCADVNECKTGKHDCSVN 57
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 163 YGCACKIGYLRDENGTCIPQDKCPT--VPCPVNEYFTN 270
+ C C GY R+ G C ++C T C VN TN
Sbjct: 25 FTCQCAEGYERNSQGKCADVNECKTGKHDCSVNALCTN 62
>SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15)
Length = 1215
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 12/78 (15%)
Frame = +1
Query: 175 CKIGYLRDENG-----TCIPQDKCPT---VPCPVNEYFTNCAKGMCRQENCTELGKLSEC 330
C G+ D+ G TC + CPT +P P + N A G+ R +CT C
Sbjct: 642 CSSGFYCDDRGLSVPKTCTTGNFCPTGTTIPQPCPSGYYNNATGVKRSVDCTPCPAGRYC 701
Query: 331 ----KTQSTELCEPGCVC 372
T+ T C+ G C
Sbjct: 702 AGFGATEPTGPCDAGFYC 719
>SB_1668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 226 CLAVYKFHFRLSDILFCRHIHIRTSPHQLIG 134
C + YKFH RL + RHI TS H G
Sbjct: 56 CRSTYKFHKRLHSYMTSRHICAVTSRHICFG 86
>SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24)
Length = 453
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +1
Query: 73 TCLQGLCRPQKCIEKND-IIFCQLVDEEKCEYGC-ACKIG-YLRDENGTCIPQDKCPTVP 243
+C+QG Q+C K D +FC + +E C C CK G + + C + P VP
Sbjct: 16 SCMQGRVH-QQCKSKCDRTLFCGHICQEPCTKNCPPCKEGCQNKCTHSECKKKCGEPCVP 74
Query: 244 CPVNEYFTNCAKGMCRQENCTEL 312
C CA CR C++L
Sbjct: 75 CA-----EPCA-WKCRHYKCSKL 91
>SB_20014| Best HMM Match : EGF_CA (HMM E-Value=1.6e-18)
Length = 184
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 527 CVCKRGF-RRADNGTCVDERDCESQLCSVNEQ 619
C CKRGF R D TC D +C++ L Q
Sbjct: 40 CACKRGFILRHDGKTCEDIDECDTGLHKCEHQ 71
>SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08)
Length = 303
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 527 CVCKRGFRRADNGTCVDERDCESQL 601
C CKRGF+ + CVD +C +L
Sbjct: 30 CYCKRGFKLSGQYHCVDIDECAEKL 54
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 163 YGCACKIGYLRDENGTCIPQDKCPTVPC 246
Y CACK GY D C D+C PC
Sbjct: 359 YTCACKPGYYGD---NCADIDECTNKPC 383
>SB_786| Best HMM Match : EGF (HMM E-Value=0)
Length = 1427
Score = 29.5 bits (63), Expect = 2.7
Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 8/116 (6%)
Frame = +1
Query: 64 EERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYL-RDENGTCIPQDKCPTV 240
E C++ +C P C C V+++ +Y CAC GY ++ C P + C
Sbjct: 157 ESYQCVKKMCEPNPCQHGR----CIEVNDD--DYQCACDAGYTGKNCENFCSP-NPCKNN 209
Query: 241 PCPVNE---YFTNCAKGM----CRQENCTELGKLSECKTQSTELCEPGCVCEGGFL 387
V+ Y C + C + ++ + + E CVC GF+
Sbjct: 210 GVCVSRGVGYHCKCKRDFKGPHCEMVDMCDMNPCKNGRCVADEKAGYKCVCHSGFV 265
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = +2
Query: 449 PNCNS-DKCEYK-YRSQSCPSDEPCEVGCVCKRGF--RRADNGTCVDERDCESQLC-SVN 613
P+C D C+ ++ C +DE CVC GF + D CV +C SV
Sbjct: 230 PHCEMVDMCDMNPCKNGRCVADEKAGYKCVCHSGFVGKNCDENYCVPNPCLNGGICKSVA 289
Query: 614 EQYLSC 631
++ C
Sbjct: 290 DKGYQC 295
>SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 1120
Score = 29.5 bits (63), Expect = 2.7
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 10/121 (8%)
Frame = +1
Query: 31 IVLC-TATCPENEERTCLQ---GLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIG---- 186
++LC TATCP E+ +C G C+P+ + N + C + + +G
Sbjct: 133 VMLCKTATCPGYEKASCRVNPCGACKPEFLDQYNRPVKCLTSCQSQRNEALGVTLGSPTP 192
Query: 187 --YLRDENGTCIPQDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKTQSTELCEP 360
+ C P+ + V C + + C M T + + +C + + +C P
Sbjct: 193 TPVVGKYIPQCTPEGEYKQVQCYGSTGYCWCVDQMGSPVLGTIVRGVPQCNSSAVGVCPP 252
Query: 361 G 363
G
Sbjct: 253 G 253
>SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1705
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 154 KCEYGCACKIGYLRDENGTCIPQDKCPTVPCPVNEYFTNCAKGMCRQENCT 306
K + C C +GY D N TC+ ++C T + Y + A NCT
Sbjct: 1255 KGSFYCTCNVGYSGDGN-TCVDINECKTT--ALAPYHGHYAHNCHSDANCT 1302
>SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29)
Length = 309
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 527 CVCKRGFRRADN-GTCVDERDC 589
CVC +G+ DN TCVD +C
Sbjct: 196 CVCNQGYHLTDNKRTCVDMNEC 217
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 163 YGCACKIGYLRDENGTCIPQDKC 231
Y CAC +GY D TC+ D+C
Sbjct: 661 YTCACNVGYTGD-GETCVDIDEC 682
>SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1202
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Frame = +2
Query: 455 CNSDKCE--YKYRSQSCPSDEPC-----EVGCVCKRGFRRADNGTCVDERDCESQ 598
C SD + + + +C SD C C C G+ D TC+D +C+S+
Sbjct: 809 CRSDALAPYHSHYAHNCHSDANCTNTKGSFFCTCHVGYS-GDGATCIDINECDSK 862
>SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 628
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +1
Query: 49 TCPENEERTCLQGLCRPQ--KCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCI 216
+CP N R C G C P +C ND + DE G +C G NG CI
Sbjct: 9 SCPSNRFR-CNNGRCIPMSWRCDGDNDC--GDMSDEPPSCSGRSCNSGQFSCSNGRCI 63
>SB_6892| Best HMM Match : TSP_3 (HMM E-Value=2.94273e-44)
Length = 749
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 494 SCPSDEPCEVGCVCKRGFRRADNG-TCVDERDCESQLCSVNEQYLSCIQAVCRVEKC 661
+C D P + C CK GF NG C + D L ++ L C +A C+ + C
Sbjct: 309 TCTVDAPGKYTCACKLGF--TGNGIECGQDED----LDGFPDKKLPCYEASCQGDNC 359
>SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1027
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Frame = +2
Query: 455 CNSDKCE--YKYRSQSCPSDEPC-----EVGCVCKRGFRRADNGTCVDERDCESQ 598
C SD + + + +C SD C C C G+ D TC+D +C+S+
Sbjct: 223 CRSDALAPYHSHYAHNCHSDANCTNTKGSFFCTCHVGYS-GDGATCIDINECDSK 276
>SB_35310| Best HMM Match : Cadherin (HMM E-Value=5.9e-23)
Length = 1250
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = +1
Query: 43 TATCPENEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCAC-KIGYLRDENGTCIP 219
T T E+ TC L + C N ++ C+C + GYL D++
Sbjct: 38 TKTTVESNGGTCTYALNETKSCGSDNGGCTGPGASCDEPTGVCSCNQTGYLLDQDQKTCK 97
Query: 220 QDKCPTVPCPV--NEYFTNCAKGMCRQ--ENCT 306
CP+ PC + N +++ +C+Q +CT
Sbjct: 98 WTGCPSNPCRICPNNTYSDQFMPVCQQCSSSCT 130
>SB_49765| Best HMM Match : EGF (HMM E-Value=0)
Length = 508
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/73 (26%), Positives = 23/73 (31%)
Frame = +1
Query: 163 YGCACKIGYLRDENGTCIPQDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKTQS 342
Y C C GY T IP C + PC N G C+ C T
Sbjct: 140 YTCTCSPGYTGRHCDTVIPLKPCDSSPCSNGGVCNNTQDGKNYTCTCSPGYTGRHCDTVI 199
Query: 343 TELCEPGCVCEGG 381
+ C+ C G
Sbjct: 200 PKPCD-SSPCNNG 211
>SB_49295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +1
Query: 247 PVNEYFT-NCAKGMCRQENCTELGKLSECKTQSTELCEPGCVCEGGFLRSKNGTGT 411
PV +Y +C+ G C C G ++ T C C G++ SK TGT
Sbjct: 81 PVTKYSNMHCSSGECASNPCLSGGACTDGNNGFT------CTCPAGYMGSKCETGT 130
>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 28.7 bits (61), Expect = 4.6
Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 6/109 (5%)
Frame = +1
Query: 100 QKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCI-PQDKCPTVPCPVN---EYFT 267
++C +K + +L +KC C+ IG ++ TC P + C N F
Sbjct: 850 RECPQKGHFLNAKLRQCKKCHSSCSSCIGPSANDCITCSDPSNALIGFTCKANCTPGQFK 909
Query: 268 NCAKGMCRQENCTELGKLSECKTQSTELCEPGCVC--EGGFLRSKNGTG 408
N A +C ENC C PG V +GG S+ G
Sbjct: 910 NTATRVC--ENCHPTCASCSSSGPKCTSCIPGLVLSEKGGVCESECSKG 956
>SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +1
Query: 61 NEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDEN-GTCI 216
N E CL R + E+ND D Y C CK GY+ D + G C+
Sbjct: 433 NNENACLD---RNECLEEENDCDDNAYCDNTSGSYECYCKEGYVGDGSIGNCV 482
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 163 YGCACKIGYLRDE-NGTCIPQDKCPT-VPCPVNEYFTNC 273
+ C C+ GYL D+ CI D+C CP TNC
Sbjct: 307 FTCECESGYLMDDLKAHCIDVDECALGATCPSG---TNC 342
>SB_39796| Best HMM Match : VWA (HMM E-Value=0)
Length = 2119
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +1
Query: 73 TCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKI--GYLRDENGTCIPQDKCPTVPC 246
TC +GL EK ++ L + +YGC+ + G + I +D P
Sbjct: 684 TCPEGLRARISKAEKAALVIANLTTADSGQYGCSLMLATGAPLVDRMQLIVEDPPPPPEP 743
Query: 247 PVNEYFT 267
P++ YFT
Sbjct: 744 PIDAYFT 750
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 28.7 bits (61), Expect = 4.6
Identities = 25/112 (22%), Positives = 37/112 (33%), Gaps = 9/112 (8%)
Frame = +1
Query: 70 RTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRD--------ENGTCIPQD 225
+TC + +C P C + + C G + R GTC+PQ+
Sbjct: 273 KTCNKNVCHPNPCHNGATCVATDSSFDCDCVAGWTGPLCQTRQYCIPNPCQNGGTCVPQE 332
Query: 226 KCPTVPCPVNEYFTNCAK-GMCRQENCTELGKLSECKTQSTELCEPGCVCEG 378
C N +C + C C G SE + +C G EG
Sbjct: 333 NGYRCTCQANYEGNDCERANPCSPNPCRNGGTCSE--MNNAAVCACGVQFEG 382
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = +2
Query: 509 EPCEVGCVCKRGFRRADNGTCVDERDCESQLCSVNEQYLSCIQAVC 646
E C++ +C G + G + +CE + C C++ VC
Sbjct: 508 EKCDINAICVHGRCKCRAGYIGNGYECEKEECDGCNPNAHCLKGVC 553
Score = 28.3 bits (60), Expect = 6.1
Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Frame = +1
Query: 142 VDE-EKCEYGCACKIGYLRDENGTCIPQDKCPTVPCPVNEYFTNCAKGMCRQENCTE--L 312
VDE EKC+ C G + G +C C +C KG+C C + +
Sbjct: 504 VDECEKCDINAICVHGRCKCRAGYIGNGYECEKEECDGCNPNAHCLKGVC---VCFDHYI 560
Query: 313 GKLSECKTQSTELCEPGCVCEGGFLRSKN 399
G C+ T C C G +N
Sbjct: 561 GNGYNCQPPCTPTCHAPSTCVSGTCMPQN 589
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 163 YGCACKIGYLRDENGTCIPQDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSE-CKTQ 339
Y C C++GY+ + T D C + PC N+ C G+ + LG + C+T
Sbjct: 359 YSCTCQVGYVGEICQT--NYDDCASNPCQ-ND--GTCQDGIAQYTCLCPLGFTGKSCETN 413
Query: 340 STELCEPGCVCEG 378
+ E C+ G
Sbjct: 414 TNECAGNPCMNMG 426
>SB_15247| Best HMM Match : Hormone_5 (HMM E-Value=0.98)
Length = 997
Score = 28.3 bits (60), Expect = 6.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 221 CGIQVPFSSLRYPILQAHPYSHFS 150
CG++ +++RYP +Q HP H +
Sbjct: 125 CGVKKRKTTMRYPSVQNHPLKHLA 148
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 139 LVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVPC-PVNEYFTNCAKGM 285
+ ++EKC+ CK GY++D G C K T C F CA+G+
Sbjct: 992 MCEKEKCK-PMQCKSGYVKDVCGCCDVCAKTVTQKCGGYWGQFGTCAEGL 1040
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Frame = +2
Query: 350 CASRAAFVKGAS*DQKTERELCPVNEVYSSCRQPNCNSDKCEYKYRSQSCPS---DEPCE 520
C + V GAS D++T C V + C+Q C + Y + CP C
Sbjct: 222 CTQKCQCVNGASCDRRTGSCNCTVGWIGKFCQQ-TCPHNTWGEGYCKEECPRGIYGRNCS 280
Query: 521 VGCVC 535
C C
Sbjct: 281 YTCQC 285
>SB_12520| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 453 LGCRQLEYTSFT-GHSSRSVF*SQEAPFTNAARLAQL 346
+G + EY FT GH S+ + PFT+A +LA L
Sbjct: 1 MGREREEYVPFTHGHKLASLEKGENVPFTDAHKLASL 37
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 485 RSQSCPSDEPCEVGCVCKRG-FRRADNGTC 571
+ +S SDE C G CKRG + D+G C
Sbjct: 287 KRRSVDSDETCPPGFWCKRGVYNDNDDGNC 316
>SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1054
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 533 CKRGFRRADNGTCVDERDCES--QLCSVN 613
CKRG+ D+ CVD +C +CS N
Sbjct: 34 CKRGYAYNDSNVCVDVNECTETPYVCSGN 62
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 163 YGCACKIGYLRDENGTCIPQDKCPTVP 243
Y C CK GY + N TC ++C +P
Sbjct: 125 YTCRCKRGYTLN-NNTCTDVNECTEIP 150
>SB_4669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 636 WMQLKYCSFTEQSWDSQSLSSTQVPLSALRNPLLQTQPTS 517
W LKY +FTE +W Q L+ QV + R L + PTS
Sbjct: 62 WQDLKYQAFTE-AWARQLLAMPQVHALSTR---LSSSPTS 97
>SB_58969| Best HMM Match : Avidin (HMM E-Value=3.7)
Length = 706
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 159 RIWMCLQNRISERRKWN-LYTARQVSNC 239
R W+ I E RKWN + T QV NC
Sbjct: 673 REWLTDSAHIHESRKWNTMITYHQVDNC 700
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 527 CVCKRGF-RRADNGTCVDERDCES 595
C C RG+ + DN TC D +CE+
Sbjct: 419 CQCPRGYIMQQDNKTCEDINECET 442
>SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Frame = +2
Query: 413 CPVNEVYSSCRQPNC--NSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDER- 583
CP ++ +C C NS +C+ + + C+ C R D+G C+
Sbjct: 343 CPPSDF--TCANSQCVPNSFRCDGENDCGDRSDESGCKPTTTCSANEFRCDDGRCITSTF 400
Query: 584 DCESQL-CSVNEQYLSCIQAVC 646
C+ + C+ C+ C
Sbjct: 401 RCDREFDCTDRSDERGCVNKTC 422
>SB_43808| Best HMM Match : DNA_binding_1 (HMM E-Value=1.1e-32)
Length = 174
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 244 CPVNEYFTNCAKGMCRQENCTELGKLSECK 333
CP N + +C K M Q T+LGK+S+CK
Sbjct: 46 CP-NSHLADCLKWM--QVYFTDLGKISKCK 72
>SB_43806| Best HMM Match : DNA_binding_1 (HMM E-Value=1.9e-31)
Length = 174
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 244 CPVNEYFTNCAKGMCRQENCTELGKLSECK 333
CP N + +C K M Q T+LGK+S+CK
Sbjct: 46 CP-NSHLADCLKWM--QVYFTDLGKISKCK 72
>SB_41393| Best HMM Match : WSC (HMM E-Value=0.06)
Length = 361
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = +1
Query: 94 RPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVPCPVNEY 261
R +KC N C +D+ C G Y +E + QD+CP VN Y
Sbjct: 137 RSKKCYT-NGYKRCDSMDDAPCVGGSFRDFVYQLEEEDALMDQDRCPARNHKVNCY 191
>SB_33236| Best HMM Match : DNA_binding_1 (HMM E-Value=1.1e-32)
Length = 174
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 244 CPVNEYFTNCAKGMCRQENCTELGKLSECK 333
CP N + +C K M Q T+LGK+S+CK
Sbjct: 46 CP-NSHLADCLKWM--QVYFTDLGKISKCK 72
>SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062)
Length = 238
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 88 LCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTV 240
+C+ Q K DI C D + + C C G L NG CI ++CP +
Sbjct: 11 MCKLQATCNKRDI--C---DTSRAKLRCCCDDG-LVFYNGLCIRVEECPCI 55
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = +2
Query: 449 PNCNSDKCEYKYRSQSCPSDEPCE-----VGCVCKRGFRRADNGTCVDERD 586
P C+ D E K + C + C+ GC CK G+R + +DE D
Sbjct: 349 PKCDVDINECKVQPGPCLNGGTCDNYLGTYGCSCKAGYRGKNCQENIDECD 399
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 163 YGCACKIGYLRDENGTCIPQ-DKCPTVPCPVNEYFTNCAK 279
YGC+CK GY R +N C D+C PC +N + C +
Sbjct: 378 YGCSCKAGY-RGKN--CQENIDECDPNPC-LNGATSRCTR 413
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +2
Query: 419 VNEVYSSCRQPNCNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQ 598
+NE SS P N C+ ++ SD+ E C CK GF N T C+S
Sbjct: 769 INECASS---PCLNGALCQNNDCDKTACSDKGYE--CFCKSGFLDVFNNTWFYSLVCKSF 823
Query: 599 LCSVNEQY 622
VN+Q+
Sbjct: 824 GQRVNQQF 831
>SB_32940| Best HMM Match : EGF (HMM E-Value=0)
Length = 1025
Score = 27.9 bits (59), Expect = 8.1
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 13/90 (14%)
Frame = +1
Query: 163 YGCACKIGYLRDENGTCIPQDKCPTVPCP--------VNEYFTNCAKGMCRQENCTELGK 318
Y C C GY + I D C + PC VN++ +C +G + TEL
Sbjct: 383 YTCTCAPGYEGRDCSRVI--DMCVSNPCKLNAACTPLVNDFHCSCPRGYTGKTCDTELNA 440
Query: 319 LSE--CKTQST---ELCEPGCVCEGGFLRS 393
S C+ ST +L C C G+ S
Sbjct: 441 CSSSPCENNSTCVNKLDTFKCFCTPGYTGS 470
>SB_31406| Best HMM Match : DNA_binding_1 (HMM E-Value=1.9e-31)
Length = 174
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 244 CPVNEYFTNCAKGMCRQENCTELGKLSECK 333
CP N + +C K M Q T+LGK+S+CK
Sbjct: 46 CP-NSHLADCLKWM--QVYFTDLGKISKCK 72
>SB_19665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 27.9 bits (59), Expect = 8.1
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 23/134 (17%)
Frame = +1
Query: 88 LCRPQKCIEK-NDIIFCQLVDEEKCE-----------YGCACKIGYLRDENGTCIPQDKC 231
LCRP EK +DI C + + C+ Y C CK GY D TC D+C
Sbjct: 150 LCRPGFEGEKCSDIDECAVSGDSPCDKNAECNNTVGSYTCTCKPGYTGDRK-TCNDIDEC 208
Query: 232 P---TVPCPVNEYFTNCAKG-MCR-QENCTELGK----LSECKTQSTELCEPGCVCEGG- 381
PC N N C T GK ++EC T + ++C C G
Sbjct: 209 AISGDSPCDKNAECNNTVGSYTCTCNPGYTGDGKTCDDVNEC-TTNPDICNGECTNYNGS 267
Query: 382 -FLRSKNGTGTMSR 420
+ ++ + TMS+
Sbjct: 268 YTCKCRDKSNTMSQ 281
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 27.9 bits (59), Expect = 8.1
Identities = 26/85 (30%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
Frame = +2
Query: 422 NEVYSSCRQPN-CNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQ 598
N Y +C P CE K C S C C G A+N TC+ R
Sbjct: 537 NSTYYTCECPKGYTGHDCESKINY--CKSSS-CYGNATCLDG---ANNYTCICPRGFTGT 590
Query: 599 LCSVNEQYLSCIQAVC-RVEKCSDL 670
LC VN C + C C DL
Sbjct: 591 LCDVNVD--ECEDSPCANGASCEDL 613
>SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +2
Query: 413 CPVNEVYSSCRQPN-CNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDC 589
C V +C +P+ C+ C C E C+C+ GFR D C D C
Sbjct: 104 CAVGFRGDNCEEPSKCHPSPCR---NGGECSETEEGYT-CLCREGFRGKD---CEDLNQC 156
Query: 590 ESQLC 604
+ C
Sbjct: 157 DPNPC 161
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,086,746
Number of Sequences: 59808
Number of extensions: 583515
Number of successful extensions: 2314
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 1807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2286
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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