Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0098
(685 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 41 1e-05
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 41 1e-05
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 23 2.1
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 2.1
M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee preprosec... 23 2.7
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 23 2.7
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 23 2.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.6
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 6.3
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 21 8.3
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 8.3
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 41.1 bits (92), Expect = 1e-05
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 52 CPENEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKC 231
CP NE + G C+ + C C + C GC C++GYLR++ C+P+ KC
Sbjct: 37 CPSNEIFSRCDGRCQ-RFCPNVVPKPLCIKI----CAPGCVCRLGYLRNKKKVCVPRSKC 91
Score = 39.9 bits (89), Expect = 2e-05
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +1
Query: 244 CPVNEYFTNCAKGMCRQENCTELGKLSECKTQSTELCEPGCVCEGGFLRSK 396
CP NE F+ C G C Q C + C ++C PGCVC G+LR+K
Sbjct: 37 CPSNEIFSRC-DGRC-QRFCPNVVPKPLC----IKICAPGCVCRLGYLRNK 81
Score = 33.9 bits (74), Expect = 0.001
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +2
Query: 404 RELCPVNEVYSSCRQPNCNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDER 583
R CP NE++S C C C C + C GCVC+ G+ R CV
Sbjct: 34 RGKCPSNEIFSRC-DGRCQRF-CPNVVPKPLCI--KICAPGCVCRLGYLRNKKKVCVPRS 89
Query: 584 DC 589
C
Sbjct: 90 KC 91
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 41.1 bits (92), Expect = 1e-05
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 52 CPENEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKC 231
CP NE + G C+ + C C + C GC C++GYLR++ C+P+ KC
Sbjct: 37 CPSNEIFSRCDGRCQ-RFCPNVVPKPLCIKI----CAPGCVCRLGYLRNKKKVCVPRSKC 91
Score = 39.9 bits (89), Expect = 2e-05
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +1
Query: 244 CPVNEYFTNCAKGMCRQENCTELGKLSECKTQSTELCEPGCVCEGGFLRSK 396
CP NE F+ C G C Q C + C ++C PGCVC G+LR+K
Sbjct: 37 CPSNEIFSRC-DGRC-QRFCPNVVPKPLC----IKICAPGCVCRLGYLRNK 81
Score = 33.9 bits (74), Expect = 0.001
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +2
Query: 404 RELCPVNEVYSSCRQPNCNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDER 583
R CP NE++S C C C C + C GCVC+ G+ R CV
Sbjct: 34 RGKCPSNEIFSRC-DGRCQRF-CPNVVPKPLCI--KICAPGCVCRLGYLRNKKKVCVPRS 89
Query: 584 DC 589
C
Sbjct: 90 KC 91
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 419 VNEVYSSCRQPNCNSDKCEYKYRSQSC 499
V + S C+ D CEY YR C
Sbjct: 108 VQKAISECKGI-AKGDNCEYAYRFNKC 133
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Frame = -3
Query: 560 CQPYEILFYKHNRLRR------VRPRDTTVTCICTRIYQNYN 453
C+P + RLRR RP + IC R+Y + N
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLN 46
>M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee
preprosecapin mRNA, complete cds. ).
Length = 77
Score = 23.0 bits (47), Expect = 2.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 425 RSRDIVPVPFFDLKKPPSQTQPGS 354
RS D+VP P + + PP + PGS
Sbjct: 43 RSADLVPEPRYIIDVPP-RCPPGS 65
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/47 (27%), Positives = 18/47 (38%)
Frame = +1
Query: 103 KCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVP 243
K ++ + Q D G I Y+ DENG + PT P
Sbjct: 61 KQVDNETPVVSQGSDSYTAPDGQQVSITYVADENGFQVQGSHIPTAP 107
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 23.0 bits (47), Expect = 2.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 425 RSRDIVPVPFFDLKKPPSQTQPGS 354
RS D+VP P + + PP + PGS
Sbjct: 43 RSADLVPEPRYIIDVPP-RCPPGS 65
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.6 bits (46), Expect = 3.6
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = -3
Query: 548 EILFYKHNRLRRVRPRDTTVTCICTRI--YQNYNWAVDSSSTLRSR--DIVPVPFF 393
E+LF +N + VRP T TR+ Y N ++ +S L ++ + P+P F
Sbjct: 620 ELLFINNNYINLVRPNTFTDKVNLTRVDMYANMIETMELTSLLLTKVAEDRPLPEF 675
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 6.3
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -3
Query: 638 LGCNLNTVHLLNKAGIHNLFHRHRCHCQPYEILFYKHNRLRR 513
LG NT+H++ +F + + Y+ L +NRL R
Sbjct: 9 LGVLFNTLHIIYSVAGLKIFEANPDTKRLYDDLLSNYNRLIR 50
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/25 (28%), Positives = 11/25 (44%)
Frame = +2
Query: 425 EVYSSCRQPNCNSDKCEYKYRSQSC 499
E+ + CR D C+ Y+ C
Sbjct: 107 EIVAVCRNEEYTGDDCQKTYQYVQC 131
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.4 bits (43), Expect = 8.3
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 482 ICTRIYQNYNWAVDSSSTLRSRDI-VPVP 399
I T IY+N N +D+SS+ R I P P
Sbjct: 635 ISTTIYENQN-CLDASSSRRGSKIGSPTP 662
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,479
Number of Sequences: 438
Number of extensions: 5192
Number of successful extensions: 23
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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