Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0096
         (576 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81127-2|CAB03387.1|  137|Caenorhabditis elegans Hypothetical pr...    38   0.007
Z81127-7|CAB03391.2|  137|Caenorhabditis elegans Hypothetical pr...    36   0.021
AF003141-3|AAK21484.1|  135|Caenorhabditis elegans Lipid binding...    34   0.063
AC024771-9|ABA61863.1|  137|Caenorhabditis elegans Lipid binding...    31   0.44 
AC024771-8|AAK70656.1|  152|Caenorhabditis elegans Lipid binding...    31   0.44 
Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z81127-2|CAB03387.1|  137|Caenorhabditis elegans Hypothetical
           protein T22G5.2 protein.
          Length = 137

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 429 PLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPN 545
           P++EI +DG+T      S  +  +  FKLGEE+ E  P+
Sbjct: 41  PILEIRLDGETWNFDQFSTFKNTKLSFKLGEEFVENSPD 79


>Z81127-7|CAB03391.2|  137|Caenorhabditis elegans Hypothetical
           protein T22G5.6 protein.
          Length = 137

 Score = 35.9 bits (79), Expect = 0.021
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +3

Query: 402 VXKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPN 545
           + K  S++SP +EI +DGDT      S  +  +  FK+ E++ E  P+
Sbjct: 32  IRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNKLAFKIREKFVEIAPD 79


>AF003141-3|AAK21484.1|  135|Caenorhabditis elegans Lipid binding
           protein protein 6 protein.
          Length = 135

 Score = 34.3 bits (75), Expect = 0.063
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 429 PLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPNS-IIKSV 563
           P +EI ++GD       S  +     FKLG+E++E  P+   +KSV
Sbjct: 39  PTLEIKVEGDLWYSNQYSTFKNTTLSFKLGQEFDETTPDGRTVKSV 84


>AC024771-9|ABA61863.1|  137|Caenorhabditis elegans Lipid binding
           protein protein 9,isoform b protein.
          Length = 137

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 12/47 (25%), Positives = 27/47 (57%)
 Frame = +3

Query: 396 YXVXKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEK 536
           + +  + + + P +E +++GD  T+ ++S  +    K+KLG   +EK
Sbjct: 30  WAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEK 76


>AC024771-8|AAK70656.1|  152|Caenorhabditis elegans Lipid binding
           protein protein 9,isoform a protein.
          Length = 152

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 12/47 (25%), Positives = 27/47 (57%)
 Frame = +3

Query: 396 YXVXKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEK 536
           + +  + + + P +E +++GD  T+ ++S  +    K+KLG   +EK
Sbjct: 45  WAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEK 91


>Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical
           protein C04G2.6 protein.
          Length = 1029

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/41 (21%), Positives = 21/41 (51%)
 Frame = +3

Query: 369 LFQCGRCTIYXVXKMMSMSSPLMEISIDGDTMTIKNSSLLR 491
           L QCG C  +    ++ + +P+    +    + + ++SL+R
Sbjct: 44  LAQCGTCKDFGTNPLLKIENPVRNAKVGRHALIVDSTSLIR 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,440,789
Number of Sequences: 27780
Number of extensions: 206593
Number of successful extensions: 394
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)