Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0094
(764 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 136 2e-33
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 112 6e-26
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 100 2e-22
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 84 2e-17
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 84 2e-17
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 81 2e-16
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 75 8e-15
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 72 1e-13
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 71 1e-13
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 70 3e-13
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 66 4e-12
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 66 7e-12
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 53 5e-08
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 33 0.045
SPCC757.05c |||acetylornithine deacetylase |Schizosaccharomyces ... 29 0.73
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 27 2.2
SPAC30D11.10 |rad22||DNA repair protein Rad22|Schizosaccharomyce... 27 2.9
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 3.9
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 27 3.9
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 6.8
SPAC630.05 |gyp7||GTPase activating protein Gyp7 |Schizosaccharo... 25 9.0
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 136 bits (330), Expect = 2e-33
Identities = 56/111 (50%), Positives = 78/111 (70%)
Frame = +2
Query: 383 VPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMK 562
+P+S++ + L + K +Q+ P +GF V L+ + ++FEWEV I GP DTLY+GG+F A +
Sbjct: 1 MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLS 60
Query: 563 FPPDYPYSPPSIRFLTNVWHPNVYENGDLCISILHPPVDDPQSGELPCERW 715
FP DYP PP ++F T +WHPNV+ NG++CISILHPP DD E ERW
Sbjct: 61 FPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERW 111
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 112 bits (269), Expect = 6e-26
Identities = 50/107 (46%), Positives = 65/107 (60%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
ALR L EYK L E +G ED+ F W+ I GP T ++GG + A +KFP DY
Sbjct: 6 ALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDY 65
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISILHPPVDDPQSGELPCERWT 718
P PP+++F +HPNVY++G +CISILH P DDP E ERW+
Sbjct: 66 PLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWS 112
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 100 bits (240), Expect = 2e-22
Identities = 46/105 (43%), Positives = 64/105 (60%)
Frame = +2
Query: 371 MSNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFK 550
M++ P+SS R L EY L+E P+ RV L+ +DNLF W GP D++Y GG F
Sbjct: 1 MASASPSSS--RRLTKEYSDLREHPIPDIRVNLV-DDNLFHWACTALGPSDSVYAGGKFH 57
Query: 551 AHMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCISILHPPVDDP 685
+KFP DYP+ PP+I F T ++HPN G++C++IL V P
Sbjct: 58 FSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKP 102
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 84.2 bits (199), Expect = 2e-17
Identities = 35/89 (39%), Positives = 51/89 (57%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
AL+ + E L ++P +G+D LF W+ I GP D+ Y GG F + FP DY
Sbjct: 2 ALKRINRELADLGKDPPSSCSAGPVGDD-LFHWQATIMGPADSPYAGGVFFLSIHFPTDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T ++HPN+ NG +C+ IL
Sbjct: 61 PFKPPKVNFTTRIYHPNINSNGSICLDIL 89
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 83.8 bits (198), Expect = 2e-17
Identities = 35/92 (38%), Positives = 56/92 (60%)
Frame = +2
Query: 389 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 568
+++A R L ++K +Q++P G + DN+ W I GP DT ++ G FK + F
Sbjct: 2 STTARRRLMRDFKRMQQDPPAGVSASPVS-DNVMLWNAVIIGPADTPFEDGTFKLVLSFD 60
Query: 569 PDYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
YP PP ++F++ ++HPNVY NG+LC+ IL
Sbjct: 61 EQYPNKPPLVKFVSTMFHPNVYANGELCLDIL 92
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 81.0 bits (191), Expect = 2e-16
Identities = 38/90 (42%), Positives = 49/90 (54%)
Frame = +2
Query: 395 SALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPD 574
S + L E SL G + NL W I GP DT Y+G FK M FP +
Sbjct: 28 SVTKRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPAN 87
Query: 575 YPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
YPYSPP+I F + +WHPNV +G++C+ IL
Sbjct: 88 YPYSPPTIIFTSPMWHPNVDMSGNICLDIL 117
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 75.4 bits (177), Expect = 8e-15
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = +2
Query: 389 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 568
+ A + L EY +LQ+ PVE K E N+ EW I GPPDT Y+GG + + FP
Sbjct: 3 SKGAYKRLMKEYLALQKNPVELVDAKPATE-NILEWHYIITGPPDTPYEGGQYHGTLIFP 61
Query: 569 PDYPYSPPSIRFLTNVWHPNVYENGDLCISI--LHPPVDDP 685
PDYP+ PP+IR +T N LC+S HP +P
Sbjct: 62 PDYPFKPPAIRMITP--SGRFQTNTRLCLSFSDFHPKSWNP 100
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 71.7 bits (168), Expect = 1e-13
Identities = 29/62 (46%), Positives = 41/62 (66%)
Frame = +2
Query: 482 NLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCISI 661
+L W+V I G P T ++GG +K M FP +YP PP RF ++HPNVY +G +C+SI
Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSI 96
Query: 662 LH 667
L+
Sbjct: 97 LN 98
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 71.3 bits (167), Expect = 1e-13
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +2
Query: 419 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSI 598
E ++L +P G V EDNL +++ + GP + Y+GG F + P +YP PP++
Sbjct: 10 EIETLTRDPPPGI-VAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNV 68
Query: 599 RFLTNVWHPNVYENGDLCISIL 664
RFLT ++HPNV + G +C+S L
Sbjct: 69 RFLTKIYHPNVDKLGRICLSTL 90
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 70.1 bits (164), Expect = 3e-13
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +2
Query: 392 SSALRALALEYKSLQEEPVEGFRV-KLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 568
+S+++ L EY S Q + G + K + + ++F W+ I GP +T Y+GG + +
Sbjct: 2 NSSIKRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVH 61
Query: 569 PDYPYSPPSIRFLTNVWHPNV-YENGDLCISIL 664
YP SPPS+ F T + HPN+ + NG++C+ IL
Sbjct: 62 EGYPISPPSVYFQTKIVHPNISWTNGEVCMDIL 94
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 66.5 bits (155), Expect = 4e-12
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +2
Query: 470 LGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVYE-NGD 646
L DN+ E+ V GP +T Y GG +K H++ P +YP+ PSI F+ ++HPN+ E +G
Sbjct: 24 LVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGS 83
Query: 647 LCISILH 667
+C+ +++
Sbjct: 84 VCLDVIN 90
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 65.7 bits (153), Expect = 7e-12
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +2
Query: 404 RALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPY 583
R +A E +Q++ G +V + +D + + GP T Y+GGYF ++ P DYP+
Sbjct: 7 RRIAKELADVQQDKQAGIQVWTINDD-ISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPF 65
Query: 584 SPPSIRFLTNVWHPNV-YENGDLCISIL 664
PP + F T ++HPNV + G +C+ IL
Sbjct: 66 RPPKMNFDTKIYHPNVSSQTGAICLDIL 93
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 52.8 bits (121), Expect = 5e-08
Identities = 18/50 (36%), Positives = 33/50 (66%)
Frame = +2
Query: 515 PPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P + Y+GG FK ++ +YP+ PP ++ L ++HPN+ G++C++IL
Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNIL 109
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 33.1 bits (72), Expect = 0.045
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +2
Query: 485 LFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNV 631
L +W I GP ++++ + + +YP +PP + F++ + P V
Sbjct: 38 LSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGV 86
>SPCC757.05c |||acetylornithine deacetylase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 400
Score = 29.1 bits (62), Expect = 0.73
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 440 EPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKF 565
E ++G +K + +WEVAIFG P G K + +F
Sbjct: 186 EEIDGIGMKTVANKLNADWEVAIFGEPTENKLGVGHKGNFRF 227
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 528 SVSGGPKIATSHSNRLSSPSNLTRKPSTGSSCRLLYSNAKA 406
S S P + S +R SS +LTR+PS S L N +A
Sbjct: 85 STSPFPYLKGSFDDRFSSTHSLTRQPSPRSPLTPLKGNTRA 125
>SPAC30D11.10 |rad22||DNA repair protein Rad22|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 469
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3
Query: 138 SRRNNRPKAHDQLNNNEKAKHRSTKRNPKKISYVRATAAPRADSCS 1
+ ++ KA Q+NN +K H S K P + S+ A P+ S S
Sbjct: 267 ANNHHSEKAGTQINNKDKGSHNSAK--PVQRSHTYPVAVPQNTSDS 310
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 371 MSNTVPTS-SALRALALEYKSLQEEPVEGFR 460
M ++VP + ++L E+ +L E+P+EGFR
Sbjct: 22 MFHSVPQNKNSLSVCVAEFTALSEKPLEGFR 52
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 222 LCLPKFLVRCYCDELKCLVDTWTA 293
LC+ + LV C C C+V +W A
Sbjct: 105 LCVNENLVVCGCSNSSCIVYSWNA 128
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 516 GPKIATSHSNRLSSPSN--LTRKPST 445
GP+ TS SN +SP+N T KPST
Sbjct: 230 GPRPTTSASNTNTSPANGAPTNKPST 255
>SPAC630.05 |gyp7||GTPase activating protein Gyp7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 588 HHPLGF*LTSGIQMYMKTEIFAYRFSTRPW 677
H LG GIQ ++ E++ + S PW
Sbjct: 401 HRVLGIIFHGGIQPSLRKEVWPFLLSVYPW 430
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,385,207
Number of Sequences: 5004
Number of extensions: 75706
Number of successful extensions: 205
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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