Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0090
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RJ94 Cluster: Putative uncharacterized protein PY0336...    33   9.4  

>UniRef50_Q7RJ94 Cluster: Putative uncharacterized protein PY03369;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY03369 - Plasmodium yoelii yoelii
          Length = 625

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
 Frame = +1

Query: 175 VSKRDAPAALFFNYQKKMESKYFMQTLNLTVKIYRGVKGYHSLNFEKN----ITTKNFQL 342
           + KRD   +   + +   E  +F +T N  V      K Y   NF  N    I  +  ++
Sbjct: 296 IIKRDKKNSSLIDIKNLKEDNHFFKTYNPNVLRNISKKNYFFYNFFSNLKHDILQEYLKI 355

Query: 343 FERCKLN*SSIKNIELLILRR 405
               KL+ SS+KNIE L +++
Sbjct: 356 SNNLKLDISSLKNIEKLDIKK 376


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,586,480
Number of Sequences: 1657284
Number of extensions: 12101233
Number of successful extensions: 24722
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 23921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24711
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)