Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0089
(680 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr... 246 5e-64
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt... 215 6e-55
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr... 210 2e-53
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch... 196 4e-49
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R... 193 4e-48
UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep: Cytoc... 192 9e-48
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C... 180 2e-44
UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep: Cyt... 176 4e-43
UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa group... 174 2e-42
UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep: Cyto... 173 3e-42
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr... 173 3e-42
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt... 167 2e-40
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch... 167 3e-40
UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella geronimensi... 165 1e-39
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs... 161 1e-38
UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Re... 159 4e-38
UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochr... 155 9e-37
UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep: Cyto... 153 5e-36
UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep... 151 2e-35
UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:... 148 1e-34
UniRef50_P05418 Cluster: Cytochrome b; n=11; Alphaproteobacteria... 143 3e-33
UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4; Pectinidae... 139 5e-32
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 139 7e-32
UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidenta... 135 1e-30
UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep: ... 134 2e-30
UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep: Cyt... 132 8e-30
UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella spira... 128 2e-28
UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI ... 128 2e-28
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt... 127 2e-28
UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep: Cyt... 126 5e-28
UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep... 126 5e-28
UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep: C... 125 9e-28
UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep: Cyt... 125 1e-27
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa... 124 2e-27
UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 124 2e-27
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina... 121 1e-26
UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular organisms... 121 1e-26
UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep: ... 120 3e-26
UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides the... 117 3e-25
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C... 116 5e-25
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:... 116 7e-25
UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep: Cy... 116 7e-25
UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep: Cyto... 114 2e-24
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto... 109 8e-23
UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase cytoch... 108 1e-22
UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep: Cyto... 108 1e-22
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ... 107 2e-22
UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas mo... 106 4e-22
UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI... 104 2e-21
UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase, ... 100 4e-20
UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Re... 100 7e-20
UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp. 402|... 96 8e-19
UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7; A... 95 1e-18
UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema americanum... 95 1e-18
UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep: Cytoc... 95 2e-18
UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262; ... 94 3e-18
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 93 4e-18
UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep: C... 93 4e-18
UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates reticula... 93 6e-18
UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4; Sa... 93 6e-18
UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa group|... 90 4e-17
UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium gallinace... 84 3e-15
UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep... 82 1e-14
UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular organism... 80 4e-14
UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11; Stolidobran... 79 1e-13
UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep: Cy... 77 5e-13
UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|R... 72 2e-11
UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis ... 70 5e-11
UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene... 69 8e-11
UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Re... 68 2e-10
UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9; Sabanejewia|... 65 2e-09
UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosipho... 64 2e-09
UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep: Cytoch... 64 4e-09
UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2; Desulfitobac... 63 5e-09
UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep... 62 9e-09
UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne javanica... 61 2e-08
UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;... 60 5e-08
UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;... 60 6e-08
UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase cytoc... 58 1e-07
UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2; Rubr... 58 2e-07
UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2; Anaeromyxo... 58 2e-07
UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle sebastis... 58 3e-07
UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase cytoc... 58 3e-07
UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1; ... 57 5e-07
UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides poly... 56 6e-07
UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:... 56 1e-06
UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 55 1e-06
UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 54 2e-06
UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b subu... 54 2e-06
UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:... 54 3e-06
UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris ... 53 6e-06
UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep... 53 6e-06
UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 52 1e-05
UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 51 2e-05
UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula ... 51 3e-05
UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:... 50 4e-05
UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus russelli... 50 5e-05
UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Re... 50 5e-05
UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4... 50 7e-05
UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1; Ples... 48 2e-04
UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep: ... 47 4e-04
UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1; Chlor... 45 0.002
UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 44 0.003
UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:... 44 0.003
UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum lineare|... 42 0.011
UniRef50_Q91096 Cluster: Cytochrome b; n=2; Malaconotidae|Rep: C... 42 0.014
UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon domesti... 42 0.014
UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter violace... 42 0.018
UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Re... 41 0.032
UniRef50_Q748R9 Cluster: Cytochrome b/b6; n=7; Desulfuromonadale... 41 0.032
UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5; Su... 39 0.098
UniRef50_Q97BT4 Cluster: Cytochrome b; n=2; Thermoplasma|Rep: Cy... 39 0.098
UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Re... 39 0.13
UniRef50_P39480 Cluster: Cytochrome b; n=5; Sulfolobaceae|Rep: C... 39 0.13
UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole ge... 38 0.23
UniRef50_Q5BLW9 Cluster: Cytochrome b; n=1; Pseudourostyla crist... 38 0.23
UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 38 0.30
UniRef50_Q9I8C6 Cluster: Cytochrome b; n=2; Phasianidae|Rep: Cyt... 36 1.2
UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus rugul... 34 2.8
UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxilla... 34 3.7
UniRef50_Q9B903 Cluster: Cytochrome b; n=1; Petrodromus tetradac... 34 3.7
UniRef50_Q4YBP9 Cluster: Putative uncharacterized protein; n=3; ... 34 3.7
UniRef50_Q703H8 Cluster: Cytochrome b; n=2; Halobacteriaceae|Rep... 33 6.4
UniRef50_Q2W546 Cluster: Cytochrome b subunit of the bc complex;... 33 8.5
UniRef50_Q9AVX9 Cluster: Putative U5 snRNP-specific protein; n=1... 33 8.5
UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium falcipar... 33 8.5
>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
b - Drosophila melanogaster (Fruit fly)
Length = 378
Score = 246 bits (601), Expect = 5e-64
Identities = 122/221 (55%), Positives = 141/221 (63%)
Frame = +2
Query: 17 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 196
+HP+FKI NN LCLIIQI+TGLFL ++YTA+I +AFY V
Sbjct: 8 SHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLAFYSV 67
Query: 197 NYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXX 376
N+ICR+VNYG ++RTLHANGASFFFICIYLH+GRGIYY S+ L
Sbjct: 68 NHICRDVNYGWLLRTLHANGASFFFICIYLHVGRGIYYGSYKFTPTWLIGVIILFLVMGT 127
Query: 377 XXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXX 556
YVLP GQ+SFW ATVITNLL AIPYLG LV + GGFAVDNATLTRF+T
Sbjct: 128 AFMGYVLPWGQMSFWVATVITNLLYAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHFILP 187
Query: 557 XXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFK 679
QTGSNNP+GLN N+DKIPFHP+FTFK
Sbjct: 188 FIVLAMTMIHLLFLHQTGSNNPIGLNSNIDKIPFHPYFTFK 228
>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
Cytochrome b - Capra sibirica (Siberian ibex)
Length = 380
Score = 215 bits (526), Expect = 6e-55
Identities = 106/222 (47%), Positives = 132/222 (59%)
Frame = +2
Query: 14 ETHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 193
+THP+ KI+NN +CLI+QI+TGLFL ++YT++ AF
Sbjct: 6 KTHPLMKIVNNTFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSS 65
Query: 194 VNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXX 373
V +ICR+VNYG IIR +HANGAS FFIC+++HIGRG+YY S+
Sbjct: 66 VTHICRDVNYGWIIRYMHANGASMFFICLFMHIGRGLYYGSYTFLETWNIGVLLLFTTMA 125
Query: 374 XXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXX 553
YVLP GQ+SFWGATVITNLLSAIPY+GT LV I GGF+VD ATLTRF+
Sbjct: 126 TAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFIL 185
Query: 554 XXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFK 679
+TGSNNP G+ N DKIPFHP++T K
Sbjct: 186 PFIIMALAMVHLLFLHETGSNNPTGIPSNTDKIPFHPYYTIK 227
>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
b - Cryptotis parva (Least shrew)
Length = 379
Score = 210 bits (514), Expect = 2e-53
Identities = 106/222 (47%), Positives = 132/222 (59%)
Frame = +2
Query: 14 ETHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 193
+THP+ KIIN+ +CLIIQI+TGLFL ++YT++ AF
Sbjct: 6 KTHPLMKIINSSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFSS 65
Query: 194 VNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXX 373
V +ICR+VNYG +IR LHANGAS FFIC++LH+GRG+YY S+
Sbjct: 66 VTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMFMETWNIGVLLLFAVMA 125
Query: 374 XXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXX 553
YVLP GQ+SFWGATVITNLLSAIPY+G+ LV I GGF+VD ATLTRF+
Sbjct: 126 TAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFAFHFIL 185
Query: 554 XXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFK 679
+TGSNNP GL + DKIPFHP++T K
Sbjct: 186 PFVIAALAGVHLLFLHETGSNNPSGLPSDADKIPFHPYYTIK 227
>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
Cytochrome b - Homo sapiens (Human)
Length = 380
Score = 196 bits (478), Expect = 4e-49
Identities = 101/220 (45%), Positives = 127/220 (57%)
Frame = +2
Query: 20 HPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRVN 199
+P+ K+IN+ CLI+QI TGLFL ++Y+ + AF +
Sbjct: 8 NPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSSIA 67
Query: 200 YICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXX 379
+I R+VNYG IIR LHANGAS FFIC++LHIGRG+YY SF
Sbjct: 68 HITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYSETWNIGIILLLATMATA 127
Query: 380 XXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXX 559
YVLP GQ+SFWGATVITNLLSAIPY+GT LV I GG++VD+ TLTRF+T
Sbjct: 128 FMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGYSVDSPTLTRFFTFHFILPF 187
Query: 560 XXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFK 679
+TGSNNPLG+ + DKI FHP++T K
Sbjct: 188 IIAALATLHLLFLHETGSNNPLGITSHSDKITFHPYYTIK 227
>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
Cytochrome b protein - Ornithodoros porcinus
Length = 365
Score = 193 bits (470), Expect = 4e-48
Identities = 93/188 (49%), Positives = 123/188 (65%)
Frame = +2
Query: 116 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 295
CL IQI TG+FL ++++++I +AF +++I R+VN G +IR HAN ASFFFI +Y+HI
Sbjct: 37 CLAIQISTGIFLAMHFSSDISLAFSSISHIMRDVNMGWMIRMAHANTASFFFIFLYIHIA 96
Query: 296 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 475
RG+Y+ SF LK + YVLP GQ+SFWGATVITNLLSAIPY+GT
Sbjct: 97 RGLYFSSFILKGPWMSGVTIIFTLMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGTS 156
Query: 476 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIP 655
+ I GGF+VDN TLTRF+T +TGS+NPLG++ N+DKIP
Sbjct: 157 ITQWIWGGFSVDNPTLTRFFTLHFMLPFILTVLIIIHIFSLHETGSSNPLGISNNIDKIP 216
Query: 656 FHPFFTFK 679
FHP++T K
Sbjct: 217 FHPYYTLK 224
>UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep:
Cytochrome b - Clarias liocephalus
Length = 373
Score = 192 bits (467), Expect = 9e-48
Identities = 95/174 (54%), Positives = 114/174 (65%)
Frame = +2
Query: 14 ETHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 193
+THP+FKI+N+ LCL +QI+TGLFL ++YT++I AF
Sbjct: 2 KTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFSS 61
Query: 194 VNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXX 373
V +ICR+VNYG IIR LHANGASFFFICIYLHIGRG+YY S+ K
Sbjct: 62 VVHICRDVNYGWIIRNLHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMM 121
Query: 374 XXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 535
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 122 TAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVDNATLTRFF 175
Score = 192 bits (467), Expect = 9e-48
Identities = 95/174 (54%), Positives = 114/174 (65%)
Frame = +2
Query: 14 ETHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 193
+THP+FKI+N+ LCL +QI+TGLFL ++YT++I AF
Sbjct: 189 KTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFSS 248
Query: 194 VNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXX 373
V +ICR+VNYG IIR LHANGASFFFICIYLHIGRG+YY S+ K
Sbjct: 249 VVHICRDVNYGWIIRNLHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMM 308
Query: 374 XXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 535
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 309 TAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVDNATLTRFF 362
>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
Cytochrome b - Leuciscus carolitertii
Length = 345
Score = 180 bits (439), Expect = 2e-44
Identities = 90/174 (51%), Positives = 110/174 (63%)
Frame = +2
Query: 14 ETHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 193
+THP+ KI N LCLI QI+TGLFL ++YT++I AF
Sbjct: 6 KTHPLMKIANATLVDLPTPSNISALWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSS 65
Query: 194 VNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXX 373
V +ICR+VNYG +IR+LHANGASFFFIC+Y+HI RG+YY S+ K
Sbjct: 66 VTHICRDVNYGWLIRSLHANGASFFFICLYMHIARGLYYGSYLYKETWNIGVVLFLLVMM 125
Query: 374 XXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 535
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VD ATLTRF+
Sbjct: 126 TAFVGYVLPWGQMSFWGATVITNLLSAVPYMGDTLVQWIWGGFSVDXATLTRFF 179
>UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep:
Cytochrome b - Micrurus fulvius microgalbineus (Mexican
coral snake)
Length = 371
Score = 176 bits (429), Expect = 4e-43
Identities = 88/188 (46%), Positives = 114/188 (60%)
Frame = +2
Query: 116 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 295
CL++Q++TG FL I+YTANI +AF V +I R+V G I++ HA GAS FFICIY+HI
Sbjct: 32 CLMLQVLTGFFLAIHYTANINLAFSSVVHITRDVPCGWIMQNTHAIGASLFFICIYIHIA 91
Query: 296 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 475
RG+YY + K V L YVLP GQ+SFW ATVITNLL+AIPYLG
Sbjct: 92 RGLYYGLYLNKNVWLSGVTLLMTLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGVA 151
Query: 476 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIP 655
+ + GGF++++ TLTRF GSNNPLG N ++DKIP
Sbjct: 152 VTTWLWGGFSINDPTLTRFCALHFILPFIIISLSSIHIILLHNEGSNNPLGTNSDIDKIP 211
Query: 656 FHPFFTFK 679
FHP+ ++K
Sbjct: 212 FHPYHSYK 219
>UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa
group|Rep: Cytochrome b - Lottia digitalis (California
fingered limpet)
Length = 389
Score = 174 bits (423), Expect = 2e-42
Identities = 87/189 (46%), Positives = 118/189 (62%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
LCLI+Q+I+GLFL+ +Y+A+ AF V +I RNVN+G ++R++HANGAS FF C+Y HI
Sbjct: 43 LCLIMQLISGLFLSFHYSAHESTAFEAVVHIERNVNFGWLLRSIHANGASAFFFCMYAHI 102
Query: 293 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
GRG+YY + + V L YVLP GQ+SFWGATVITNLL+AIP +G+
Sbjct: 103 GRGLYYGCYCQRKVWLSGVVLFLITMGIAFLGYVLPWGQMSFWGATVITNLLTAIPMVGS 162
Query: 473 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKI 652
LV + GGF+V TLTRFY+ GS+NPLG++ + KI
Sbjct: 163 PLVKWVWGGFSVSGVTLTRFYSLHFILPFVLSMLVLGHVILLHDKGSSNPLGISSDTGKI 222
Query: 653 PFHPFFTFK 679
FHP+++ K
Sbjct: 223 RFHPYYSTK 231
>UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep:
Cytochrome b - Venerupis (Ruditapes) philippinarum
Length = 440
Score = 173 bits (422), Expect = 3e-42
Identities = 84/189 (44%), Positives = 114/189 (60%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+CL+ QIITGL + ++YT + +AF V +I R+VN G +R LHANGAS FF+ IYLHI
Sbjct: 50 MCLVSQIITGLLMAVHYTPEVNLAFSSVVHIMRDVNGGWFVRNLHANGASAFFMLIYLHI 109
Query: 293 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
GRG+YY SF++K L YVLP GQ+SFWGATVITNL A+PY+G+
Sbjct: 110 GRGVYYHSFHMKKTWLVGCIIFTMLMVTAFTGYVLPWGQMSFWGATVITNLFGAVPYVGS 169
Query: 473 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKI 652
L+ + GG V +ATL RF+ +TGS+NPLG++ + D +
Sbjct: 170 TLMEWVWGGHCVGDATLKRFFVLHFVSPFIIAALVALHLFFLHETGSSNPLGVDSSGDLV 229
Query: 653 PFHPFFTFK 679
PFH ++ K
Sbjct: 230 PFHNYYLLK 238
>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
b - Arabidopsis thaliana (Mouse-ear cress)
Length = 393
Score = 173 bits (421), Expect = 3e-42
Identities = 86/191 (45%), Positives = 120/191 (62%), Gaps = 2/191 (1%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+CL+IQI+TG+FL ++YT ++++AF V +I R+V G ++R +HANGAS FFI +YLHI
Sbjct: 44 ICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHI 103
Query: 293 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
RG+YY S++ ++V YVLP GQ+SFWGATVIT+L SAIP +
Sbjct: 104 FRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVV 163
Query: 467 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLD 646
G +V + GGF+VDNATL RF++ Q GSNNPLG++ +D
Sbjct: 164 GDTIVTWLWGGFSVDNATLNRFFSLHYLLPFILVGASLLHLAALHQYGSNNPLGVHSEMD 223
Query: 647 KIPFHPFFTFK 679
KI F+P+F K
Sbjct: 224 KIAFYPYFYVK 234
>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
Cytochrome b - Spizellomyces punctatus
Length = 396
Score = 167 bits (407), Expect = 2e-40
Identities = 89/189 (47%), Positives = 115/189 (60%), Gaps = 2/189 (1%)
Frame = +2
Query: 119 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 298
L+I II+GL L ++YT N +AF V +I R+VN G ++R +HANGASFFFI +YLHIGR
Sbjct: 40 LVILIISGLTLAMHYTPNTLLAFSSVEHIMRDVNNGWLLRYIHANGASFFFIWVYLHIGR 99
Query: 299 GIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
+YY S+ L YVLP GQ+SFWGATVITNLLSAIP++GT
Sbjct: 100 NLYYGSYRSPRGLLWSIGVVIFILMMATAFIGYVLPWGQMSFWGATVITNLLSAIPWIGT 159
Query: 473 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKI 652
V + GGF+VDNATL RF++ Q GSNNP G++ + D++
Sbjct: 160 DFVLFVWGGFSVDNATLNRFFSLHYLLPFILAALVVMHLLALHQDGSNNPEGISSSSDRL 219
Query: 653 PFHPFFTFK 679
FHP+FT K
Sbjct: 220 RFHPYFTSK 228
>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
Cytochrome b - Mytilus edulis (Blue mussel)
Length = 397
Score = 167 bits (405), Expect = 3e-40
Identities = 87/221 (39%), Positives = 119/221 (53%)
Frame = +2
Query: 17 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 196
T+ + KI+N+ LCL+IQ+++GL L+ +YTA+ ++AF V
Sbjct: 22 TNKLVKIMNDSFYDLPCPVNLNAWWSFGSMLGLCLVIQLLSGLLLSAHYTAHEDMAFDSV 81
Query: 197 NYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXX 376
+I RNV G ++R +HANG+S FFICIY HI RG+YY S+ K V
Sbjct: 82 VHIMRNVEKGWMLRNIHANGSSMFFICIYAHIARGLYYGSYLDKTVWYFGVHLFLLTMAE 141
Query: 377 XXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXX 556
Y LP GQ+S+WGATVITN+LS P +G ++ + GG+ V NATL RFYT
Sbjct: 142 AFLGYTLPWGQMSYWGATVITNMLSVSPVVGESMLRYVWGGWTVCNATLKRFYTLHFLLP 201
Query: 557 XXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFK 679
+ GSNNPLG+ +PFHPF+T K
Sbjct: 202 FVMVAVVFLHLFFLHEKGSNNPLGIESGTMCVPFHPFYTIK 242
>UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella
geronimensis|Rep: Cytochrome b - Anniella geronimensis
Length = 262
Score = 165 bits (400), Expect = 1e-39
Identities = 79/137 (57%), Positives = 95/137 (69%)
Frame = +2
Query: 128 QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIY 307
QIITG+FL ++YT +I +AF V +ICR+V YG ++R LH NGAS FF CIYLHIGRG+Y
Sbjct: 1 QIITGIFLAMHYTPHISLAFSSVAHICRDVQYGWLLRNLHTNGASMFFFCIYLHIGRGLY 60
Query: 308 YESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN* 487
Y S LK YVLP GQ+SFWGATVITNL SA+PY+G LV+
Sbjct: 61 YGSHTLKKTWYTGTMLLLMLMATAFLGYVLPWGQMSFWGATVITNLSSALPYIGPTLVHW 120
Query: 488 I*GGFAVDNATLTRFYT 538
GGFA+DNATLTRF+T
Sbjct: 121 TWGGFAIDNATLTRFFT 137
>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
(RNA maturase SCbI4) [Contains: Truncated, nonfunctional
cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
precursor (RNA maturase SCbI4) [Contains: Truncated,
nonfunctional cytochrome b; RNA maturase bI4 (EC
3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 638
Score = 161 bits (391), Expect = 1e-38
Identities = 81/191 (42%), Positives = 115/191 (60%), Gaps = 2/191 (1%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFFF+ +++H+
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHM 97
Query: 293 GRGIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
+G+YY S+ V L Y GQ+S WGATVITNL SAIP++
Sbjct: 98 AKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFV 157
Query: 467 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLD 646
G +V+ + GGF+V N T+ RF+ GS+NPLG+ NLD
Sbjct: 158 GNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMALHIHGSSNPLGITGNLD 217
Query: 647 KIPFHPFFTFK 679
+IP H +F FK
Sbjct: 218 RIPMHSYFIFK 228
>UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Rep:
Apocytochrome b - Iphiteon panicea
Length = 397
Score = 159 bits (387), Expect = 4e-38
Identities = 79/189 (41%), Positives = 105/189 (55%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
LCLIIQ+ITG+ L ++Y I +F + + RNV++G I R LHANGAS FF+C+YLHI
Sbjct: 46 LCLIIQLITGILLAMHYCPEINNSFNTIAHTIRNVSWGHITRNLHANGASIFFLCVYLHI 105
Query: 293 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
R IY+ ++ K YVLP GQ+SFW ATVITNL SAIPY+G
Sbjct: 106 SRNIYHNTWKNKTTWTLGITIYLLMIITAFMGYVLPWGQMSFWAATVITNLFSAIPYIGN 165
Query: 473 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKI 652
+V I G F++ NATL RFY+ + +NP G +D +
Sbjct: 166 TIVLWIWGSFSISNATLNRFYSLHYLLPFILTTLIGMHILALQEENHSNPTGTQSEVDSL 225
Query: 653 PFHPFFTFK 679
PFH ++T K
Sbjct: 226 PFHQYYTTK 234
>UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochrome
b - Rhodospirillum rubrum
Length = 405
Score = 155 bits (376), Expect = 9e-37
Identities = 83/193 (43%), Positives = 112/193 (58%), Gaps = 4/193 (2%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ +II I TG+FL + YTA+++ AF V I R+VNYG ++R +HANGAS FFI +Y+H+
Sbjct: 50 IAMIIMIATGIFLAMSYTAHVDHAFDSVERIMRDVNYGWLMRYMHANGASMFFIVVYVHM 109
Query: 293 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
RG+YY S+ + + YVLP GQ+SFWGATVITNL SAIP +
Sbjct: 110 FRGLYYGSYKPPREVLWWLGLVILLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPVV 169
Query: 467 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRN-- 640
G +V + GGF+VDN TL RF++ SNNPLG++
Sbjct: 170 GDDIVTLLWGGFSVDNPTLNRFFSLHYLFPMLLFAVVFLHMWALHVKKSNNPLGIDAKGP 229
Query: 641 LDKIPFHPFFTFK 679
D IPFHP++T K
Sbjct: 230 FDTIPFHPYYTVK 242
>UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep:
Cytochrome b - Ranina ranina
Length = 179
Score = 153 bits (370), Expect = 5e-36
Identities = 75/144 (52%), Positives = 90/144 (62%)
Frame = +2
Query: 248 ANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 427
ANGASFFFIC+Y+HIGRGI+Y S+ + + YVLP GQ+SFWGA
Sbjct: 1 ANGASFFFICLYIHIGRGIFYGSYMTFHAWMIGVVILFMVMAAAFLGYVLPWGQMSFWGA 60
Query: 428 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 607
TVITNL SAIP++GT LV I GGF+V NATLTRF+T Q
Sbjct: 61 TVITNLFSAIPFIGTDLVQWIWGGFSVGNATLTRFFTFHFILPFIVLAASLVHILFLHQA 120
Query: 608 GSNNPLGLNRNLDKIPFHPFFTFK 679
G+NNPLG++ DKIPFHP+FTFK
Sbjct: 121 GANNPLGISSQSDKIPFHPYFTFK 144
>UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep:
Cytochrome b - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 445
Score = 151 bits (365), Expect = 2e-35
Identities = 82/200 (41%), Positives = 110/200 (55%), Gaps = 10/200 (5%)
Frame = +2
Query: 110 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 289
A CL++QI+TG+ L ++YT ++++AF V +I RNVN G ++R LHANGAS FFI +YLH
Sbjct: 52 AFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLH 111
Query: 290 IGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 463
I RG+YY S+ + + YVLP GQ+SFWGATVIT L AIP
Sbjct: 112 IFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPG 171
Query: 464 LGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL---- 631
+G + + GG AVDNATL RF++ TG+NNP G+
Sbjct: 172 IGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRR 231
Query: 632 ----NRNLDKIPFHPFFTFK 679
D +PF P+F K
Sbjct: 232 TSKAEAQKDTVPFWPYFIIK 251
>UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:
Cytochrome b - Lingula unguis
Length = 418
Score = 148 bits (358), Expect = 1e-34
Identities = 80/189 (42%), Positives = 106/189 (56%), Gaps = 2/189 (1%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
L L+ QII+G FL+ +Y A+++ AF + +I R+VNYG +IR H NGAS FF +Y+HI
Sbjct: 37 LMLVCQIISGFFLSTHYVAHVDYAFDSIVHINRDVNYGALIRGFHINGASMFFFFMYIHI 96
Query: 293 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
GRGIYY + V YVLP GQ+S+W + VIT+LLS IPY+G
Sbjct: 97 GRGIYYGCYRQAGVWYTGIILMLLLMATSFLGYVLPWGQMSYWASVVITSLLSTIPYIGP 156
Query: 473 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL--NRNLD 646
LV I GGF+V ATLTRFY+ +TGS+NPLGL +
Sbjct: 157 SLVEWIWGGFSVGQATLTRFYSLHFILPFVMVIVVIIHVGLLHETGSSNPLGLYDPSGVC 216
Query: 647 KIPFHPFFT 673
FHP ++
Sbjct: 217 MRSFHPLYS 225
>UniRef50_P05418 Cluster: Cytochrome b; n=11;
Alphaproteobacteria|Rep: Cytochrome b - Paracoccus
denitrificans
Length = 440
Score = 143 bits (347), Expect = 3e-33
Identities = 78/200 (39%), Positives = 108/200 (54%), Gaps = 10/200 (5%)
Frame = +2
Query: 110 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 289
A CL++QI TG+ L ++YT ++++AF V +I R+VN G ++R LHANGAS FF+ +Y+H
Sbjct: 52 AFCLVLQIATGIVLVMHYTPHVDLAFASVEHIMRDVNGGYMLRYLHANGASLFFLAVYIH 111
Query: 290 IGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 463
I RG+YY S+ + + YVLP GQ+SFWGATVIT L AIP
Sbjct: 112 IFRGLYYGSYKAPREVTWIVGMLIYLMMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPG 171
Query: 464 LGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL---- 631
+G + + GG AVDN TL RF++ TG+NNP G+
Sbjct: 172 VGEAIQTWLLGGPAVDNPTLNRFFSLHYLLPFVIAALVVVHIWAFHTTGNNNPTGVEVRR 231
Query: 632 ----NRNLDKIPFHPFFTFK 679
D +PF P+F K
Sbjct: 232 GSKEEAKKDTLPFWPYFVIK 251
>UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4;
Pectinidae|Rep: Cytochrome b apoenzyme - Placopecten
magellanicus (Sea scallop)
Length = 395
Score = 139 bits (337), Expect = 5e-32
Identities = 71/188 (37%), Positives = 105/188 (55%)
Frame = +2
Query: 116 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 295
CL+ QI+TG FL+ YYTA+ ++AF V++I + V+ G +R+ H N A+F CIY+HIG
Sbjct: 41 CLVSQILTGWFLSFYYTAHEDLAFSSVSFIMKEVSMGWAMRSFHINVANFMLGCIYVHIG 100
Query: 296 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 475
RG+YY SF L V YVLP GQ+++W A VI+++++AIP +G
Sbjct: 101 RGLYYGSFRLYKVWASGIILLVLVMLAAFTGYVLPWGQMAYWAAQVISSMVTAIPKVGGE 160
Query: 476 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIP 655
+ + GG+AV N TL R ++ +GS NPLGL+ + +
Sbjct: 161 VAMWVWGGYAVGNITLKRLFSVHFLLPFVILAVVLLHLLFLHSSGSGNPLGLDSDCSLVR 220
Query: 656 FHPFFTFK 679
FH FF+ K
Sbjct: 221 FHSFFSVK 228
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 139 bits (336), Expect = 7e-32
Identities = 74/189 (39%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Frame = +2
Query: 125 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 304
+QI+TG+ L ++YT + ++AF V I R+VNYG ++R +HA GAS FF +Y+H+ RG+
Sbjct: 56 MQILTGVILAMHYTPHADLAFKSVELIVRDVNYGWLLRNMHACGASMFFFAVYVHMLRGL 115
Query: 305 YYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 478
YY S+ + + + YVLP GQ+SFWGATVITNL SAIPY G +
Sbjct: 116 YYGSYKEPREVLWILGVIIYLLMMATGFMGYVLPWGQMSFWGATVITNLFSAIPYFGESI 175
Query: 479 VN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDK--I 652
V + GG++V N TL RF++ G NNP G+ +K +
Sbjct: 176 VTLLWGGYSVGNPTLNRFFSLHYLLPFLIAGVVVLHVWALHVAGQNNPEGVEPKSEKDTV 235
Query: 653 PFHPFFTFK 679
PF P T K
Sbjct: 236 PFTPHATIK 244
>UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidentatus
compar|Rep: Cytochrome b - Campanulotes bidentatus
compar (small pigeon louse)
Length = 374
Score = 135 bits (326), Expect = 1e-30
Identities = 75/188 (39%), Positives = 101/188 (53%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+CL+IQ+++G+FL+ +Y+ IE AF V I +V +G + R++HANGASFFF +YLHI
Sbjct: 44 VCLMIQLVSGIFLSFHYSPTIEEAFSSVVMIVDDVPFGWMFRSIHANGASFFFFWVYLHI 103
Query: 293 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
GRG+Y + L V + YV P GQI GATVIT+LLSAIPY+G
Sbjct: 104 GRGLYLSKYKLNPVWMKGVLIFFFLMGTAFMGYVPPWGQIFLGGATVITSLLSAIPYMGG 163
Query: 473 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKI 652
LV + GGF V TL RF++ NP+G + N K
Sbjct: 164 FLVKWVWGGFFVKGPTLHRFFSLHYLLPLILSVFVFFQVFFFQSKSGVNPMGGSLNSKKG 223
Query: 653 PFHPFFTF 676
F P+F F
Sbjct: 224 FFVPYFFF 231
>UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep:
Apocytochrome b - Polytomella parva
Length = 370
Score = 134 bits (324), Expect = 2e-30
Identities = 72/191 (37%), Positives = 106/191 (55%), Gaps = 2/191 (1%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
L L QI+TG+ L ++Y + +AFY V ++ +V YG +IR H NGAS FF+ ++LH+
Sbjct: 38 LLLASQIVTGILLAMHYCPDTSLAFYSVIHLTVDVPYGFVIRYFHMNGASLFFVAVFLHL 97
Query: 293 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
R +YY S + + + + YVLP GQ+SFWGATVIT+L+SA+P +
Sbjct: 98 FRNLYYNSGSQPRELLYISGVVILLLMVITAFIGYVLPWGQMSFWGATVITSLVSAVPIV 157
Query: 467 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLD 646
GT LV + GGF+V N TL RF++ GS NPL +N ++
Sbjct: 158 GTDLVYYLWGGFSVSNPTLNRFFSFHYLLPFVLAGLSIAHLAALHSYGSTNPLSIN-SVA 216
Query: 647 KIPFHPFFTFK 679
K+PF ++ K
Sbjct: 217 KVPFGSYYIIK 227
>UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep:
Cytochrome b - Hemirhagerrhis hildebrandtii
Length = 366
Score = 132 bits (319), Expect = 8e-30
Identities = 66/128 (51%), Positives = 83/128 (64%)
Frame = +2
Query: 116 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 295
CL +Q+ TG FL I+YTA++ +AF V +I R+V YG +++ HA GAS FFICIY HI
Sbjct: 32 CLALQMTTGFFLAIHYTADVNLAFSSVVHIMRDVPYGWMMQNTHAIGASLFFICIYTHIA 91
Query: 296 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 475
RG+YY S+ K V L YVLP GQ+SFW ATVITNLL+AIPYLGT
Sbjct: 92 RGLYYGSYMNKEVWLSGTTLLIILMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTT 151
Query: 476 LVN*I*GG 499
+ + GG
Sbjct: 152 MTXWLWGG 159
>UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella
spiralis|Rep: Apocytochrome b - Trichinella spiralis
(Trichina worm)
Length = 371
Score = 128 bits (308), Expect = 2e-28
Identities = 68/189 (35%), Positives = 100/189 (52%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ + IQI+TGL L +Y++ + AF + + R V +G ++R +H NGASF F+ +Y H+
Sbjct: 36 MLMSIQIMTGLLLVMYFSTSESEAFNSIITLMREVKFGFLLRFMHLNGASFIFMTMYAHM 95
Query: 293 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
+G+ Y SF L L YV+P G +SFW ATVIT+ +SAIP LG
Sbjct: 96 FKGLMYSSFMLPGSWLTGNLILFLMILVAFMGYVIPWGNMSFWAATVITSFMSAIPILGE 155
Query: 473 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKI 652
++ I GG+++ TL F+T GS+NPLG + ++ K
Sbjct: 156 SILYWIWGGYSITGRTLQFFFTLHYLLPFVISAIAMIHLLLLHSKGSSNPLGTHSHMLKT 215
Query: 653 PFHPFFTFK 679
FHPFFT K
Sbjct: 216 KFHPFFTNK 224
>UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI
precursor (mRNA maturase bI1) (COB intron protein)
[Contains: Truncated non-functional cytochrome b; DNA
endonuclease/RNA maturase I-AniI (EC 3.1.-.-)]; n=23;
Fungi/Metazoa group|Rep: Intron-encoded DNA endonuclease
I-AniI precursor (mRNA maturase bI1) (COB intron
protein) [Contains: Truncated non-functional cytochrome
b; DNA endonuclease/RNA maturase I-AniI (EC 3.1.-.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 488
Score = 128 bits (308), Expect = 2e-28
Identities = 69/168 (41%), Positives = 93/168 (55%), Gaps = 2/168 (1%)
Frame = +2
Query: 14 ETHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 193
++HP+ KI+N+ ALCL IQI+TG+ L ++YT ++ AF
Sbjct: 5 KSHPLLKIVNSYIIDSPQPANLSYLWNFGSLLALCLGIQIVTGVTLAMHYTPSVSEAFNS 64
Query: 194 VNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXX 367
V +I R+VN G ++R LH+N AS FF +YLHIGRG+YY S+
Sbjct: 65 VEHIMRDVNNGWLVRYLHSNTASAFFFLVYLHIGRGLYYGSYKTPRTLTWAIGTVILIVM 124
Query: 368 XXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVD 511
YVLP GQ+S WGATVITNL+SAIP++G +V I GG D
Sbjct: 125 MATAFLGYVLPYGQMSLWGATVITNLMSAIPWIGQDIVEFIWGGLYTD 172
>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
Cytochrome b - Agamermis sp. BH-2006
Length = 388
Score = 127 bits (307), Expect = 2e-28
Identities = 75/191 (39%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
Frame = +2
Query: 110 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 289
+L + IQIITGLFLT YY N E F + I YG ++ +H N +S F IYLH
Sbjct: 33 SLIMSIQIITGLFLTFYYE-NSENCFDSIYIIHIETFYGVLVHFIHLNVSSIIFFLIYLH 91
Query: 290 IGRGIYYESFNL-KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
+ +G+ + SF++ K + YVLP GQ+S WGATVITNLLSAIP +
Sbjct: 92 MTKGLIFSSFSMMKITWISGWIMMMLSMLSAFMGYVLPWGQMSLWGATVITNLLSAIPVI 151
Query: 467 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLD 646
G ++V I GG+ V N T+ F++ GSNNP+G N +L
Sbjct: 152 GKMMVEWIWGGYFVSNFTMKMFFSFHFLVPFIILIFIMIHLIILHYYGSNNPIG-NFSLM 210
Query: 647 KIPFHPFFTFK 679
KI F+P ++FK
Sbjct: 211 KIEFNPIYSFK 221
>UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep:
Cytochrome b - Crassostrea virginica (Eastern oyster)
Length = 403
Score = 126 bits (304), Expect = 5e-28
Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
L L QI++GL LT+ YTA+ +A ++Y+ R+ NYG IIR+LH GAS FF Y H+
Sbjct: 40 LILGSQILSGLILTMNYTADESLAVVSIDYMMRDANYGWIIRSLHMGGASLFFALTYAHV 99
Query: 293 GRGIYYESF-NLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 469
RG++Y ++ +V YVLP G +S+WG TVITN+++ +P G
Sbjct: 100 ARGVFYGAYLKNPHVWYSGLSLYILSMGVGFLGYVLPWGVMSYWGLTVITNMMTVVPG-G 158
Query: 470 TILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDK 649
++ GGF + + TL R + Q GS+NPLGL++
Sbjct: 159 ARALDWFQGGFVISSLTLKRVFVLHFILPFVILGLALVHVLILHQNGSSNPLGLDQEGIN 218
Query: 650 IPFHPFFTFK 679
+PFHP+++ K
Sbjct: 219 VPFHPYYSIK 228
>UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep:
Cytochrome b - Hiatella arctica
Length = 384
Score = 126 bits (304), Expect = 5e-28
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
Frame = +2
Query: 119 LIIQIITGLFLTIYYT-ANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 295
L +QI++G+ L++YY +E AF + +I R+VN G I+R++H GAS FF +Y H+G
Sbjct: 42 LFVQILSGMLLSLYYVPGTMEDAFNSIQFIERDVNGGWILRSVHVAGASSFFFFMYCHVG 101
Query: 296 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 475
RG+YY S+ YVLP GQ+SFWGATVI+N L+ IP+ G
Sbjct: 102 RGLYYGSYKNFKAWSMGVAILALSMLEGFMGYVLPAGQMSFWGATVISNFLTVIPFFGDT 161
Query: 476 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIP 655
L+ + GG++V + TL+RF+ + G++NPLG++ D I
Sbjct: 162 LLKYVLGGYSVCDLTLSRFFVAHFLAPFLISLMVLFHLIWGHEKGASNPLGVS-TTDWIT 220
Query: 656 FHPFFTFK 679
P + FK
Sbjct: 221 LSPGYVFK 228
>UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep:
Cytochrome b - Caenorhabditis elegans
Length = 370
Score = 125 bits (302), Expect = 9e-28
Identities = 72/189 (38%), Positives = 94/189 (49%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ LI QI+TG FL YYT + +AF V YI VN+G + R H NGAS FFI +YLHI
Sbjct: 36 MVLIFQILTGTFLAFYYTPDSLMAFSTVQYIMYEVNFGWVFRIFHFNGASLFFIFLYLHI 95
Query: 293 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
+G+++ S+ LK V + YVL Q+SFW A VIT+LLS IP G
Sbjct: 96 FKGLFFMSYRLKKVWMSGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGP 155
Query: 473 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKI 652
+V I GF V ATL F+ TGS + L + + DK+
Sbjct: 156 TIVTWIWSGFGVTGATLKFFFVLHFLLPWAILVIVLGHLIFLHSTGSTSSLYCHGDYDKV 215
Query: 653 PFHPFFTFK 679
F P + K
Sbjct: 216 CFSPEYLGK 224
>UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep:
Cytochrome b - Brugia malayi (Filarial nematode worm)
Length = 362
Score = 125 bits (301), Expect = 1e-27
Identities = 74/189 (39%), Positives = 100/189 (52%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ L+ QIITG FLT YYTA AF V YI VN G ++R +H+NGAS FF+ IYLHI
Sbjct: 30 IMLMSQIITGFFLTFYYTAGD--AFSSVQYIMFEVNLGWLVRIMHSNGASMFFLFIYLHI 87
Query: 293 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
+G+ S+ L V + YVL GQ+S+W A VIT+L++++PYLG
Sbjct: 88 FKGLINSSYRLSSVWISGIAMYLVLMGIAFTGYVLIWGQMSYWAAVVITSLMTSVPYLGK 147
Query: 473 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKI 652
+V I G F+V TL FY+ TGS++ L + + DKI
Sbjct: 148 YMVWWIWGSFSVCENTLKFFYSIHFIFPWLLLVMVIFHLFFLHFTGSSSSLYCHGDYDKI 207
Query: 653 PFHPFFTFK 679
F P + FK
Sbjct: 208 HFFPSYWFK 216
>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
bI3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 517
Score = 124 bits (300), Expect = 2e-27
Identities = 61/136 (44%), Positives = 91/136 (66%), Gaps = 2/136 (1%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFFF+ +++H+
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHM 97
Query: 293 GRGIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
+G+YY S+ V L Y GQ+S WGATVITNL SAIP++
Sbjct: 98 AKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFV 157
Query: 467 GTILVN*I*GGFAVDN 514
G +V+ + GGF +++
Sbjct: 158 GNDIVSWLWGGFNMED 173
>UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=64;
cellular organisms|Rep: Cytochrome b/b6, N-terminal
domain - Acidovorax sp. (strain JS42)
Length = 473
Score = 124 bits (299), Expect = 2e-27
Identities = 74/202 (36%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
L L+IQI+TG+FL ++Y + AF V YI R+V +G +IR +H+ GAS FF+ +YLH+
Sbjct: 60 LVLVIQIVTGIFLVMHYKPDAAKAFESVEYIMRDVPWGWLIRYMHSTGASAFFVVVYLHM 119
Query: 293 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
RG+ Y S+ + V + Y+LP GQ+S+WGA VI NL SAIP++
Sbjct: 120 FRGLLYGSYRKPRELVWIFGCAIFLALMAEAFMGYLLPWGQMSYWGAQVIVNLFSAIPFI 179
Query: 467 GTILVN*I*GGFAVDNATLTRFYT-XXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL---- 631
G L I G + V +ATL RF++ GSNNP G+
Sbjct: 180 GPDLALLIRGDYVVSDATLNRFFSFHVIAVPLVLLGLVVAHLLALHDVGSNNPDGIEIKG 239
Query: 632 --------NRNLDKIPFHPFFT 673
LD +PFHP++T
Sbjct: 240 PGKPVDEHGHPLDGVPFHPYYT 261
>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
jecorina|Rep: Apocytochrome B - Trichoderma reesei
(Hypocrea jecorina)
Length = 427
Score = 121 bits (292), Expect = 1e-26
Identities = 65/162 (40%), Positives = 91/162 (56%)
Frame = +2
Query: 14 ETHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 193
++HP+ K++N A+CLIIQI+TG+ L ++Y ++ AF
Sbjct: 5 KSHPLLKLVNMYIIDHSQPSNISYLWNFGSLLAVCLIIQIVTGVTLAMHYNPSVAEAFNS 64
Query: 194 VNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXX 373
+ +I R+VN G +IR LH+N AS FF +YLHIGRG+YY S+
Sbjct: 65 IEHIMRDVNNGWLIRYLHSNTASAFFFLVYLHIGRGLYYASYR------------APRTL 112
Query: 374 XXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GG 499
YVLP GQ+S WGATVITNL+SAIP++G +V + GG
Sbjct: 113 AWVSLYVLPYGQMSLWGATVITNLISAIPWIGQDIVEFVWGG 154
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 503 AVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT-GSNNPLGLNRNLDKIPFHPFFTFK 679
+V+NATL RF+ T G++NPLG+ D+IPF P+F FK
Sbjct: 208 SVNNATLNRFFALHFVLPFVLAALALMHLIAVHDTAGASNPLGVPGYYDRIPFAPYFLFK 267
>UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular
organisms|Rep: Cytochrome b - Chromatium vinosum
(Allochromatium vinosum)
Length = 411
Score = 121 bits (292), Expect = 1e-26
Identities = 74/204 (36%), Positives = 106/204 (51%), Gaps = 15/204 (7%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
L L+IQI+TG++L + Y + +AF V YI R+V++G +IR +H+ GAS FFI IYLH+
Sbjct: 47 LTLVIQIVTGVWLAMSYKPDAGLAFASVEYIMRDVDWGWLIRYMHSTGASMFFIVIYLHM 106
Query: 293 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
RG+ S+ + + + Y+LP GQ+S+WGA VI NL +A+P +
Sbjct: 107 FRGLLRGSYRKPRELLWMIGVVIYLVMMATAFFGYLLPWGQMSYWGAQVIVNLFAAVPVV 166
Query: 467 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL----- 631
G L + G F + +ATL RF+ GSNNP G+
Sbjct: 167 GEDLSVWVRGDFVISDATLNRFFAFHFLLPFLLAGLVFLHIVALHHVGSNNPDGIEIKEG 226
Query: 632 ---NRNLDK-----IPFHPFFTFK 679
NR DK IPFHP++T K
Sbjct: 227 PKGNRWSDKAPADGIPFHPYYTVK 250
>UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep:
Apocytochrome b - Bothropolys sp. SP-2004
Length = 378
Score = 120 bits (289), Expect = 3e-26
Identities = 55/97 (56%), Positives = 69/97 (71%)
Frame = +2
Query: 389 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 568
YVLP GQ+SFWGATVITNL+SA+PY+GT++V + GGFAVDNATLTRF++
Sbjct: 133 YVLPWGQMSFWGATVITNLVSAVPYMGTMIVQWLWGGFAVDNATLTRFFSFHFILPFIIA 192
Query: 569 XXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFK 679
QTGSNNP G+++NLDK+ FHPFF+ K
Sbjct: 193 AMVILHLLFLHQTGSNNPAGMSKNLDKVSFHPFFSVK 229
Score = 36.7 bits (81), Expect = 0.52
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +1
Query: 61 T*PI*YFFLMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSN 240
T PI + +K+RI S M + N+ IIF+N L Y N S L+ K + ++ +
Sbjct: 24 TIPIKFILHVKFRILISIMFSYPNHNSIIFSNTLFRSYYNCLWYSNLHFTKRQHSMSYTC 83
Query: 241 ITC*WSFIFFYLHLFTYRTRNL 306
ITC YL + + + N+
Sbjct: 84 ITCKRGINLLYLFMSSRWSSNM 105
>UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides
thecatus|Rep: Cytochrome b - Leptorhynchoides thecatus
Length = 372
Score = 117 bits (281), Expect = 3e-25
Identities = 67/185 (36%), Positives = 95/185 (51%)
Frame = +2
Query: 125 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 304
IQII+GL L+ +Y ++ F + I ++V G IR +H++G S F +YLHI RG+
Sbjct: 39 IQIISGLILSWFYFIDLSGGFKSLILIMQDVWGGWFIRFIHSSGVSLFMFIMYLHILRGL 98
Query: 305 YYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN 484
Y SF V YVLP G +S+WG TV+TN+LSAIP +G LV
Sbjct: 99 IYGSFCKVDVWYSGILLLFICMGSAFLGYVLPWGSMSYWGMTVVTNMLSAIPMVGVYLVE 158
Query: 485 *I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHP 664
I GG + +TL RF++ + GS+NPLG+ + +K FHP
Sbjct: 159 TIWGGSSAGVSTLVRFFSFHYLLSLFIMVFILIHLILLHECGSSNPLGVYYSCEKFTFHP 218
Query: 665 FFTFK 679
F+ K
Sbjct: 219 LFSLK 223
>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
Cytochrome b - Plasmodium falciparum
Length = 376
Score = 116 bits (279), Expect = 5e-25
Identities = 70/184 (38%), Positives = 92/184 (50%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ IQIITG+FL YT ++ A+Y + +I R + G R +HA GAS F+ YLHI
Sbjct: 34 IIFFIQIITGVFLASRYTPDVSYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHI 93
Query: 293 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
RG+ Y L + YVLP GQ+S+WGATVITNLLS+IP
Sbjct: 94 LRGLNYSYMYLPLSWISGLILFMIFIVTAFVGYVLPWGQMSYWGATVITNLLSSIP---- 149
Query: 473 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKI 652
+ V I GG+ V + T+ RF+ GS NPLG + L KI
Sbjct: 150 VAVIWICGGYTVSDPTIKRFFVLHFILPFIGLCIVFIHIFFLHLHGSTNPLGYDTAL-KI 208
Query: 653 PFHP 664
PF+P
Sbjct: 209 PFYP 212
>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
Cytochrome b - Priapella chamulae
Length = 256
Score = 116 bits (278), Expect = 7e-25
Identities = 53/105 (50%), Positives = 68/105 (64%)
Frame = +2
Query: 14 ETHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 193
++HP+ KI N+ LCLI QI+TGLFL ++YT++I AF
Sbjct: 6 KSHPLLKIANDALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDISTAFSS 65
Query: 194 VNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 328
V +ICR+VNYG +IR +HANGASFFFICIY HIGRG+YY S+ K
Sbjct: 66 VTHICRDVNYGWLIRNMHANGASFFFICIYFHIGRGLYYGSYLYK 110
>UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep:
Cytochrome b - Pfiesteria piscicida
Length = 374
Score = 116 bits (278), Expect = 7e-25
Identities = 67/185 (36%), Positives = 98/185 (52%), Gaps = 1/185 (0%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ +I+QIITG+ L ++YT+++ A++ + ++ R V YG +R H++GASF F+ ++LH+
Sbjct: 46 VAIILQIITGILLALHYTSDLNSAYFSLFFLIREVFYGWCLRYFHSSGASFVFLFLFLHL 105
Query: 293 GRGIYYES-FNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 469
GR ++Y S F YVLP GQ+SFWGATVITNLLS P
Sbjct: 106 GRAMFYGSYFYNPNTWFSGIILFLFLMAIAFMGYVLPFGQMSFWGATVITNLLSPFP--- 162
Query: 470 TILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDK 649
L+ + GG+ V + TL RF+ SNNPL + N +K
Sbjct: 163 -SLIEWVSGGYCVHSPTLKRFFLFHYQLPFLVCGFSILHLFYLHFLSSNNPLRNSTN-NK 220
Query: 650 IPFHP 664
IPF P
Sbjct: 221 IPFFP 225
>UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep:
Cytochrome b - Galaxias sp. 'teviot'
Length = 386
Score = 114 bits (275), Expect = 2e-24
Identities = 55/97 (56%), Positives = 65/97 (67%)
Frame = +2
Query: 389 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 568
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 132 YVLPWGQMSFWGATVITNLLSAVPYVGNDLVQWIWGGFSVDNATLTRFFAFHFLFPFVIA 191
Query: 569 XXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFK 679
+TGSNNP GLN + DKI FHP+F++K
Sbjct: 192 GATVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYK 228
>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
Length = 378
Score = 109 bits (261), Expect = 8e-23
Identities = 49/105 (46%), Positives = 67/105 (63%)
Frame = +2
Query: 14 ETHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 193
++HP+ KIIN+ +CL++QIITGLFL ++YTA+ AF
Sbjct: 6 KSHPLMKIINHSFIDLPAPSNFYSWWNFGSLLGVCLLLQIITGLFLAMHYTADTTSAFSS 65
Query: 194 VNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 328
+ +ICR+VNYG +IR HANGAS FFIC+Y+HI RG+YY S+ K
Sbjct: 66 IAHICRDVNYGWVIRYTHANGASMFFICLYIHIARGLYYGSYLFK 110
>UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase
cytochrome b subunit; n=1; Gluconobacter oxydans|Rep:
Ubiquinol-cytochrome c reductase cytochrome b subunit -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 392
Score = 108 bits (260), Expect = 1e-22
Identities = 65/189 (34%), Positives = 89/189 (47%), Gaps = 4/189 (2%)
Frame = +2
Query: 119 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 298
+ I +GLFL I YT +I AF V I R V G IR+LH G + F C+Y+HIGR
Sbjct: 53 MAFMIASGLFLAINYTPDITQAFASVEAIDRQVPSGWFIRSLHMGGVTMLFACLYIHIGR 112
Query: 299 GIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
++Y S+ + + L YVLP GQ+S+WGATVI N + AIP +G
Sbjct: 113 SLWYGSYKAPRELLWLTGLGLMLMVMVTAFAGYVLPWGQMSYWGATVILNAVHAIPLIGQ 172
Query: 473 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLN--RNLD 646
L + GG + N L R + SNNP G++
Sbjct: 173 PLSELLLGGDTLGNVALHRLFVLHFTMAFAILGVIALHVAALHVVKSNNPSGVDPVNPSQ 232
Query: 647 KIPFHPFFT 673
+PFHP++T
Sbjct: 233 TLPFHPYYT 241
>UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep:
Cytochrome b - Lemmus lemmus (Norway lemming)
Length = 211
Score = 108 bits (259), Expect = 1e-22
Identities = 45/71 (63%), Positives = 60/71 (84%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
LCLIIQI+TGLFL ++YT++ AF V +ICR+VNYG +IR +HANGAS FFIC++LH+
Sbjct: 20 LCLIIQILTGLFLAMHYTSDTATAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHV 79
Query: 293 GRGIYYESFNL 325
GRG+YY S+N+
Sbjct: 80 GRGVYYGSYNM 90
Score = 48.0 bits (109), Expect = 2e-04
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 602 QTGSNNPLGLNRNLDKIPFHPFFTFK 679
+TGSNNP GLN + DKIPFHP++T K
Sbjct: 121 ETGSNNPTGLNSDADKIPFHPYYTIK 146
>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
cytochrome B subunit; n=20; cellular organisms|Rep:
Ubiquinol cytochrome C oxidoreductase, cytochrome B
subunit - Xylella fastidiosa
Length = 420
Score = 107 bits (258), Expect = 2e-22
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Frame = +2
Query: 119 LIIQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFFICIYLHIG 295
L+ Q++TG+FL ++Y ++ AF + I R+V +G +IR +H+ GAS FFI +YLH+
Sbjct: 54 LVNQVVTGIFLAMHYKPSVAEAFQSIEMTIMRDVEWGWLIRYMHSTGASLFFIGVYLHMF 113
Query: 296 RGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 469
RG+ Y S + V + YVLP GQ+SFWGA VI +L AIP +G
Sbjct: 114 RGLIYGSGKKPRELVWVLGMLMYVVLMVEAFVGYVLPWGQVSFWGAKVIISLFGAIPVIG 173
Query: 470 TILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQ-TGSNNPLGLN---- 634
L I G + + TL RF+ + GSNNP G++
Sbjct: 174 NGLDEWIMGDYLPSDVTLNRFFALHVIALPLLLGFLVVLHLVALRGVGSNNPDGIDIHQG 233
Query: 635 ---------RNLDKIPFHPFFTFK 679
++ D IPFHP++T K
Sbjct: 234 PKGNRWDSMQSADSIPFHPYYTLK 257
>UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas
mobilis|Rep: Cytochrome b subunit - Zymomonas mobilis
Length = 418
Score = 106 bits (255), Expect = 4e-22
Identities = 64/193 (33%), Positives = 94/193 (48%), Gaps = 4/193 (2%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ L IQIITGL L ++Y A+ AF + I R V +G +IR H GAS FF +Y+H+
Sbjct: 54 IALTIQIITGLALAMHYVASSNEAFNSIEAIMRYVGFGWLIRYGHMVGASLFFAALYIHM 113
Query: 293 GRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
RG+YY S+ + V L Y L GQ+S+W A VIT L S +P++
Sbjct: 114 FRGVYYGSYKAPREVVWLIGVLLFMLAMATAFLGYSLVWGQMSYWAAQVITGLFSVVPFV 173
Query: 467 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL--NRN 640
G + + GGFA + AT+ RF+ + GS NP G+ +
Sbjct: 174 GEKIRIWVLGGFAPNAATVNRFFVLHFTLPFVILAVVGLHVWALHRQGSGNPTGIEVKKA 233
Query: 641 LDKIPFHPFFTFK 679
+ +P P++ K
Sbjct: 234 EEVVPMQPYYIAK 246
>UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI1
precursor [Contains: Truncated non-functional cytochrome
b; Intron-encoded endonuclease bI1 (EC 3.1.-.-)]; n=2;
Ustilago maydis|Rep: Probable intron-encoded
endonuclease bI1 precursor [Contains: Truncated
non-functional cytochrome b; Intron-encoded endonuclease
bI1 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus)
Length = 410
Score = 104 bits (250), Expect = 2e-21
Identities = 48/102 (47%), Positives = 66/102 (64%)
Frame = +2
Query: 14 ETHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 193
+THPI + N+ +CLIIQI+TG+FL ++YT ++++AF
Sbjct: 5 KTHPILGLANSYLIDSPQPSNISYMWNFGSLLGVCLIIQILTGVFLAMHYTPSVDLAFIS 64
Query: 194 VNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESF 319
V +I R+VNYG +IR LHAN ASFFFI +YLHIGRG+YY S+
Sbjct: 65 VEHIMRDVNYGWLIRYLHANTASFFFIFVYLHIGRGLYYGSY 106
>UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase,
cytochrome b subunit; n=26; Epsilonproteobacteria|Rep:
Ubiquinol cytochrome c oxidoreductase, cytochrome b
subunit - Nitratiruptor sp. (strain SB155-2)
Length = 465
Score = 100 bits (239), Expect = 4e-20
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Frame = +2
Query: 125 IQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 301
I +I+G+FL +YY + ++AF VNY I + V +G + R +HA AS F+ IY+H+ G
Sbjct: 53 ILLISGIFLLMYYKPDTKLAFDSVNYTIMQEVWFGWLWRHMHAVAASVVFLVIYIHMFTG 112
Query: 302 IYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 475
IYY S+ + + + Y+LP GQ+S+W A VITNL IP++G
Sbjct: 113 IYYASYKRGREMIWISGMLLFVTFSAEAFSGYMLPWGQMSYWAAQVITNLFGGIPFIGDD 172
Query: 476 LVN*I*GGFAVDNATLTRFY 535
LV I G F V + TLTRF+
Sbjct: 173 LVVWIRGNFYVSDPTLTRFF 192
>UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Rep:
Apocytochrome b - Doryphora sassafras
Length = 347
Score = 99.5 bits (237), Expect = 7e-20
Identities = 68/191 (35%), Positives = 101/191 (52%), Gaps = 2/191 (1%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ L+IQI+TG+FL +++T ++++AF V ++ R+V G ++R +HANGAS F I ++L I
Sbjct: 30 ISLVIQIVTGVFLAMHHTPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFLIVVHLXI 89
Query: 293 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
RG ++ ++V GQ+SFWG + AI +
Sbjct: 90 FRGXXXXXYSSXXEFVRCXGVVXXXXMIVXAXXGXXPXXGQMSFWGXXXXXSXXXAIXXV 149
Query: 467 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLD 646
G V GF+VD TL + Q GSNNPLG++ +D
Sbjct: 150 GDTXVTXXXXGFSVDXXTLNXXXSLHHXLPLILVGASLLHLAALHQYGSNNPLGVHSEMD 209
Query: 647 KIPFHPFFTFK 679
KI +P+F K
Sbjct: 210 KIAPYPYFYVK 220
>UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp.
402|Rep: Cytochrome b - Sycoscapter sp. 402
Length = 157
Score = 95.9 bits (228), Expect = 8e-19
Identities = 46/94 (48%), Positives = 61/94 (64%)
Frame = +2
Query: 398 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXX 577
P GQ+SFWGATVITNL+SAI Y+G +V + GGF+V +ATL RFYT
Sbjct: 2 PWGQMSFWGATVITNLVSAISYVGESVVLWMWGGFSVSDATLNRFYTFHFISDFVILFLV 61
Query: 578 XXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFK 679
QTGS NP+GLN N++KIPF+P+++ +
Sbjct: 62 LIHLVFLHQTGSTNPMGLNSNMNKIPFNPYYSIQ 95
>UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7;
Acidithiobacillus ferrooxidans|Rep: Putative cytochrome
b precursor - Thiobacillus ferrooxidans
(Acidithiobacillus ferrooxidans)
Length = 402
Score = 95.5 bits (227), Expect = 1e-18
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
L +++Q+I+G FL +Y + AF V I + +G +IR +H +G S FI +Y H+
Sbjct: 43 LMIVLQLISGFFLMAHYVPTSQDAFASVQGIMYDTKWGWLIRYMHVDGVSLIFILLYTHM 102
Query: 293 GRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
RG+ Y S + V + YVLP G +S+W VIT+++ A+P +
Sbjct: 103 FRGLLYGSHRAPRELVWVIGYVIYLLMMAEAFVGYVLPFGNLSYWAGEVITSIMHALPVV 162
Query: 467 GTILVN*I*GGFAVDNATLTRFYT-XXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLN--- 634
G L GG + +ATL R + GSNNP G++
Sbjct: 163 GPSLTTLTRGGPGIGSATLQRLLALHVVLFFLIILAAIALHIVALHRVGSNNPDGIDIKK 222
Query: 635 ------RNLDKIPFHPFFTFK 679
+ LD +PFHP++T K
Sbjct: 223 HKGPDGKPLDGVPFHPYYTVK 243
>UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema
americanum|Rep: Cytochrome b - Xiphinema americanum
Length = 366
Score = 95.5 bits (227), Expect = 1e-18
Identities = 56/141 (39%), Positives = 79/141 (56%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ + IQ+ +GL L Y++ +A+ V I R V G ++R++H+N ASF F +++H
Sbjct: 33 ILMAIQVASGLILAFCYSSGF-LAWSSVVEITREVYAGWLVRSIHSNTASFVFFLMFMHF 91
Query: 293 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
RGI SF L + YVLP GQ+SFWGATVI NLLS +PY G
Sbjct: 92 FRGIIQSSFYLVLPWISGFVLMLLTMAAAFLGYVLPWGQMSFWGATVIINLLSILPY-GK 150
Query: 473 ILVN*I*GGFAVDNATLTRFY 535
+LV + GGF V AT + F+
Sbjct: 151 MLVVWLWGGFYVSAATCSFFF 171
>UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep:
Cytochrome b - Procladius villosimanus
Length = 233
Score = 94.7 bits (225), Expect = 2e-18
Identities = 47/83 (56%), Positives = 53/83 (63%)
Frame = +2
Query: 431 VITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTG 610
VITNLLSAIPYLG L + GGFAVDNATLTRF+ QTG
Sbjct: 1 VITNLLSAIPYLGNELXQWLWGGFAVDNATLTRFFXFHFLFPFIIAALTTIHLLFLHQTG 60
Query: 611 SNNPLGLNRNLDKIPFHPFFTFK 679
S NPLG+N N+DKIPFHP+FT+K
Sbjct: 61 SPNPLGINSNVDKIPFHPYFTYK 83
>UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01262 - Citrobacter koseri ATCC BAA-895
Length = 390
Score = 93.9 bits (223), Expect = 3e-18
Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Frame = +2
Query: 125 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 304
+QI++GL L ++Y +AF + +I R+V +G ++R H+ GAS FF YLHI R +
Sbjct: 41 VQILSGLVLAMFYVPTEGLAFDSIIHIMRSVRHGELVRNAHSIGASLFFFACYLHIFRAM 100
Query: 305 YYESFNLKY--V*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 478
YY + Y + + Y L GQ S+W ATVIT AIP++G L
Sbjct: 101 YYNVYRKPYLKMWMISVTLYVLLMITAFLGYSLIWGQKSYWAATVITGFTRAIPWVGDTL 160
Query: 479 VN*I*GGFAVDNATLTRFY 535
+ + GG+A TL RFY
Sbjct: 161 YSFLVGGYAPGTPTLGRFY 179
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 93.5 bits (222), Expect = 4e-18
Identities = 50/118 (42%), Positives = 63/118 (53%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ IQI+TG+FL Y+ I A+Y + +I R + G R +HA GAS F YLHI
Sbjct: 200 IIFFIQILTGVFLASRYSPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFFLTYLHI 259
Query: 293 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
RG+ Y L + YVLP GQ+S+WGATVITNLLS IP L
Sbjct: 260 LRGLNYSYLYLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVITNLLSGIPAL 317
>UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep:
Cytochrome b - Theileria parva
Length = 363
Score = 93.5 bits (222), Expect = 4e-18
Identities = 58/188 (30%), Positives = 86/188 (45%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ LI+QI++GL LT +Y E AF ++ + +G +R H+ G SF+F +++HI
Sbjct: 29 ILLILQILSGLLLTFFYVPCKEGAFESLSRLVTETQFGWFVRLYHSVGVSFYFFFMFIHI 88
Query: 293 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
+G++Y S + + YVLP GQ+SFWGATVI+NLL
Sbjct: 89 IKGMWYSSKYMPWSWYSGIVILILSIVIAFTGYVLPDGQMSFWGATVISNLLEWFGKAKV 148
Query: 473 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKI 652
I GGF V TL RF+ + GS+NPL L + +
Sbjct: 149 ITF----GGFTVGPETLKRFFILHFVLPAVVLVIVLLHLYFLHREGSSNPLTLAEAVALL 204
Query: 653 PFHPFFTF 676
F+ F
Sbjct: 205 KFYQLILF 212
>UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates
reticulatus|Rep: Cytochrome b - Dendrobates reticulatus
(redback poison frog)
Length = 109
Score = 93.1 bits (221), Expect = 6e-18
Identities = 50/89 (56%), Positives = 59/89 (66%), Gaps = 20/89 (22%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYR--------------------VNYICRNVNYG*I 232
LCLI QIITGLFL ++YTA+ +AF V +ICR+VNYG +
Sbjct: 3 LCLIAQIITGLFLAMHYTADTSMAFSSIAHICRDVNNGWLLRSLLSSVAHICRDVNYGWL 62
Query: 233 IRTLHANGASFFFICIYLHIGRGIYYESF 319
+R LHANGASFFFICIYLHIGRG+YY SF
Sbjct: 63 LRNLHANGASFFFICIYLHIGRGMYYGSF 91
>UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4;
Saccharomycetales|Rep: Cytochrome b mRNA maturase bI2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 423
Score = 93.1 bits (221), Expect = 6e-18
Identities = 45/106 (42%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFFF+ +++H+
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHM 97
Query: 293 GRGIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWG 424
+G+YY S+ V L Y GQ+S WG
Sbjct: 98 AKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWG 143
>UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa
group|Rep: Cytochrome b - Neurospora crassa
Length = 448
Score = 90.2 bits (214), Expect = 4e-17
Identities = 41/102 (40%), Positives = 62/102 (60%)
Frame = +2
Query: 14 ETHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 193
++HP+ K++N+ A CLIIQI+TG+ L ++Y+ N+ AF
Sbjct: 5 KSHPLLKLVNSYLIDASQPSNISYLWNFGSLLACCLIIQIVTGVTLAMHYSPNVLEAFNS 64
Query: 194 VNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESF 319
+ +I R+VN G ++R LH+N AS FF +YLHIGRG+YY S+
Sbjct: 65 IEHIMRDVNNGWLVRYLHSNTASAFFFLVYLHIGRGMYYGSY 106
>UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium
gallinaceum|Rep: Cytochrome b - Plasmodium gallinaceum
Length = 300
Score = 84.2 bits (199), Expect = 3e-15
Identities = 54/142 (38%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ IQI+ G+ L + + A+Y V +I R + G R +HA GASF FI YLHI
Sbjct: 34 IVFFIQILKGVLLALVILQKLSYAYYSVQHILRAIMDGWCFRYMHATGASFVFILTYLHI 93
Query: 293 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL-G 469
RG+ Y L + YVLP GQ+SFW TVITNLL YL
Sbjct: 94 LRGLNYSYSYLPLSWISGLMIFLISIVTAFYGYVLPWGQMSFWNTTVITNLL----YLFR 149
Query: 470 TILVN*I*GGFAVDNATLTRFY 535
T ++ GG+ V + TL RF+
Sbjct: 150 TCFMD--CGGYLVSDPTLKRFF 169
>UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep:
Cytochrome b - Schistosoma mekongi
Length = 372
Score = 81.8 bits (193), Expect = 1e-14
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Frame = +2
Query: 119 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 298
+IIQ+ +G+ L+++Y + + + N+ Y IIR +H S F +Y+HIGR
Sbjct: 32 MIIQVFSGIVLSLFYDVLGNFSMLMM-WTDDNI-YCWIIRYIHIWCVSIIFFLVYVHIGR 89
Query: 299 GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 478
+YY S+ + V Y+LP Q+S+W ATV+T+++ ++P +G ++
Sbjct: 90 SLYYSSYRMIGVWNVGFFIYVILMVEAFLGYILPWHQMSYWAATVLTSIILSVPVVGGLI 149
Query: 479 VN*I*GGFAVDNA-TLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL-NRNLDKI 652
+ + GGF+V TL R + Q+GS +PL N D +
Sbjct: 150 FSYVVGGFSVTLIDTLVRVFPVHISLGFILLGLIVLHLFYLHQSGSTSPLFFYNGYSDCV 209
Query: 653 PFHPFFTFK 679
FH + T K
Sbjct: 210 YFHSYHTIK 218
>UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular
organisms|Rep: Cytochrome b6 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 215
Score = 80.2 bits (189), Expect = 4e-14
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Frame = +2
Query: 116 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 295
C ++Q+ TG +T YY + AF V YI N+G +IR++H AS + + LH+
Sbjct: 43 CFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVF 102
Query: 296 RGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 469
R F + + Y LP QI +W ++T + AIP +G
Sbjct: 103 RVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIG 162
Query: 470 TILVN*I*GGFAVDNATLTRFYT 538
+ LV + G +V +TLTRFY+
Sbjct: 163 SPLVELLRGSASVGQSTLTRFYS 185
>UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11;
Stolidobranchia|Rep: Cytochrome oxidase B - Polycarpa
papillata
Length = 141
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/88 (46%), Positives = 51/88 (57%)
Frame = +2
Query: 404 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXX 583
GQ+ FWGATVITN LS IPY G +VN I GGF+V + TLTRFYT
Sbjct: 5 GQMGFWGATVITNFLSVIPYYGGDIVNWIWGGFSVGSPTLTRFYTFHFLFPFLIIVFSLV 64
Query: 584 XXXXXXQTGSNNPLGLNRNLDKIPFHPF 667
+TGS+NPL L+ + K+ F P+
Sbjct: 65 HLVFLHRTGSSNPLKLSSSSLKMSFWPY 92
>UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep:
Cytochrome b/b6 - Geobacter sulfurreducens
Length = 367
Score = 76.6 bits (180), Expect = 5e-13
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Frame = +2
Query: 125 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 304
IQ++TG+ L IYY + + AF V I +V +G +IR HA G++ + LH+ +
Sbjct: 50 IQVVTGILLLIYYVPDADKAFRSVTAIMNDVPFGWLIRMCHAVGSNMMVAVLLLHMLSVL 109
Query: 305 YYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 478
+ S+ + L Y+LP Q+SFW TV TN AIP +G L
Sbjct: 110 FMGSYKRPRELNWLTGFILFNLVLGISLTGYLLPWSQLSFWATTVATNSAGAIPVIGGYL 169
Query: 479 VN*I*GGFAVDNATLTRFY 535
V + GG V TL RF+
Sbjct: 170 VEFLRGGKLVGPPTLGRFF 188
>UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|Rep:
Cytochrome b6 - Heliobacillus mobilis
Length = 213
Score = 71.7 bits (168), Expect = 2e-11
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
L ++Q +TGLFL +YY E AF V I V +G IR+LH A+ + ++LH+
Sbjct: 40 LAFLVQCVTGLFLALYYKPTPEAAFASVQMITNEVRFGATIRSLHHWAANLMILLVFLHM 99
Query: 293 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
R Y SF + L Y+LP Q+S+W + + ++P +
Sbjct: 100 LRVYYTGSFKKPRELNWLAGCFLLVLSLGLAFTGYLLPYEQLSYWASVIGAETAGSLPVV 159
Query: 467 GTILVN*I*GGFAVDNATLTRFY 535
G + + GG V L+RFY
Sbjct: 160 GATMKIMMQGGIKVTAEMLSRFY 182
>UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis
koenigi|Rep: Cytochrome b - Lanius meridionalis koenigi
Length = 108
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/61 (55%), Positives = 37/61 (60%)
Frame = +2
Query: 242 LHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFW 421
LHANGASFFFICIYLHIGRG+YY S+ K YVLP GQ+SFW
Sbjct: 48 LHANGASFFFICIYLHIGRGLYYGSYMNKETWNVGIILLLMLMATAFVGYVLPWGQMSFW 107
Query: 422 G 424
G
Sbjct: 108 G 108
>UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene;
n=2; Chlamydomonas|Rep: , mobile intron of apocytochrome
b gene - Chlamydomonas smithii
Length = 374
Score = 69.3 bits (162), Expect = 8e-11
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ L Q++TG+ L ++Y +++ AF V ++ +V G I+R HANGAS FFI +YLH+
Sbjct: 38 MMLASQMLTGILLAMHYVGHVDYAFASVQHLMTDVPSGMILRYAHANGASLFFIVVYLHV 97
Query: 293 GRGIYYES 316
RG+YY S
Sbjct: 98 LRGMYYGS 105
>UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Rep:
Cytochrome b - Meloidogyne hapla (Root-knot nematode
worm)
Length = 132
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/71 (40%), Positives = 48/71 (67%)
Frame = +2
Query: 122 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 301
IIQ+I+GL L++YY++ +F + Y+ VN G +IR +H N SFFF+ ++LHI +
Sbjct: 38 IIQVISGLMLSLYYSSESNFSFNSIQYLMIEVNKGWLIRLIHFNLVSFFFMMLFLHILKA 97
Query: 302 IYYESFNLKYV 334
+++ S+ LK V
Sbjct: 98 LFFFSYRLKMV 108
>UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9;
Sabanejewia|Rep: Cytochrome-b protein - Sabanejewia
balcanica
Length = 81
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = -3
Query: 276 QIKKNEAPLACNVRIIQP*FTFRQI*FTL*KAISIFAV*YIVKNNPVXXXXIRHKASRDP 97
Q+KKN+APL +R+ P FT RQ+ T KA+ + V + KN+PV I+HK S +P
Sbjct: 1 QMKKNDAPLPWMLRMSHPYFTSRQMWATEEKAVVMSDVYCMAKNSPVWIWVIKHKPSNEP 60
Query: 96 IFHQEEILDGLGKSINELLMI 34
FH E+L+G GKS + L I
Sbjct: 61 KFHHTEMLEGAGKSTSASLSI 81
>UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Cytochrome b/b6-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 562
Score = 64.5 bits (150), Expect = 2e-09
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +2
Query: 122 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 301
+++ ITGL L IYY+ + A+ + I +V G ++R +H GA F + LH+ R
Sbjct: 86 VLEAITGLVLMIYYSPSPNEAYATMTQIMNDVPLGGLMRNVHRLGAHFMVAVVILHMLRT 145
Query: 302 IYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 475
+ S+ +++ Y+LP Q++FW T+ +++ A P +G
Sbjct: 146 YFTASYKAPRQFIWFTGMILLFMTLLLSFSGYLLPWDQLAFWAVTIGSSMADAAPGVGPA 205
Query: 476 LVN*I*GGFAVDNATLTRFY 535
+ + GG + L RFY
Sbjct: 206 IGRLLRGGAEIGAGALLRFY 225
>UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep:
Cytochrome b - Aleyrodes elevatus
Length = 232
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/84 (41%), Positives = 45/84 (53%)
Frame = +2
Query: 428 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 607
TVITNLLS+IP G ++V I GG++V N TL RF++
Sbjct: 1 TVITNLLSSIPIWGEMIVYWIWGGYSVGNPTLIRFFSFHFFFPFLMIFTIFLHLIFLHGH 60
Query: 608 GSNNPLGLNRNLDKIPFHPFFTFK 679
GS NPLGL + DKI F+P+F K
Sbjct: 61 GSGNPLGLGGSYDKIYFYPYFMLK 84
>UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2;
Desulfitobacterium hafniense|Rep: Cytochrome b/b6-like -
Desulfitobacterium hafniense (strain DCB-2)
Length = 215
Score = 63.3 bits (147), Expect = 5e-09
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
L ++Q++TG+ L +YY +E A+ V +I V G +R++H A+ I + LH
Sbjct: 42 LLFLVQVVTGIVLAVYYNPTMEGAYQSVMFINDEVFMGKALRSVHNIAANLMLIMVVLHF 101
Query: 293 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
R ++ ++ ++ + Y+LP Q+ +W A + T +L +IP +
Sbjct: 102 LRVVFTGAYKPPRQFNWVVGVLLLLLVILFCFTGYLLPLDQVGYWAAIIGTKILGSIPIV 161
Query: 467 GTILVN*I*GGFAVDNATLTRFY 535
G L+ G + + TL RF+
Sbjct: 162 GDQLLLLGQAGTKITDHTLMRFF 184
>UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep:
Cytochrome b - Aquifex aeolicus
Length = 409
Score = 62.5 bits (145), Expect = 9e-09
Identities = 58/204 (28%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Frame = +2
Query: 125 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN-GASFFFICIYLHIGRG 301
IQII+G+ L +YY + V+ + N + H GA+FF +YLH+ G
Sbjct: 50 IQIISGMVLILYYNLQSQ-TLLTVHLLDNGRNSLRMALQAHTRTGANFFMAIVYLHMFTG 108
Query: 302 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL---LSAIPYL 466
IYY ++ + V + Y+LP GQ+S+WG V T + L+ P L
Sbjct: 109 IYYNAYKRPRELVWIVGWLIYFVLILTALSGYLLPWGQLSYWGFIVTTEIPGSLADAPIL 168
Query: 467 GTI-------LVN*I*GGFAVDNATLTR-FYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 622
I +V + GG+ V + TL R F + G +NP
Sbjct: 169 KPIFKAIAETIVLWMKGGYVVTDVTLGRVFGSHVLIYPLILLALVGIHLYLVRAAGISNP 228
Query: 623 LGL----NRNLDK-IPFHPFFTFK 679
G+ +N DK +PFHP+ T K
Sbjct: 229 EGIEYDKKKNPDKFVPFHPYMTLK 252
>UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne
javanica|Rep: Cytochrome b - Meloidogyne javanica
(Root-knot nematode worm)
Length = 113
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ +Q+I+GL L+++Y ++ +F + Y+ VN G +IR +H N S FF+ + LH+
Sbjct: 35 IIFFMQVISGLLLSLFYESSSNFSFDSIQYLMIEVNNGWLIRLIHFNMVSLFFMLVMLHM 94
Query: 293 GRGIYYESFNLKYV 334
+ ++Y SF LK V
Sbjct: 95 LKALFYFSFRLKKV 108
>UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;
Symbiobacterium thermophilum|Rep: Menaquinol-cytochrome
C reductase - Symbiobacterium thermophilum
Length = 258
Score = 60.1 bits (139), Expect = 5e-08
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
L ++ +TG++L YY ++ A+ + + +V +G R LH A I ++LH+
Sbjct: 64 LMFLMLTVTGVWLMFYYVPSVPGAYESMKALETDVIFGPFARNLHRWAAHGMVIAVWLHM 123
Query: 293 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
R Y S+ ++ + Y+LP Q+++W V +N+ P +
Sbjct: 124 TRVFYTGSYKPPREFNWVIGVALFLITVLLSFTGYLLPWDQLAYWAIQVGSNMAKVTPVI 183
Query: 467 GTILVN*I*GGFAVDNATLTRFYT 538
GT + + G+ + ATL R+YT
Sbjct: 184 GTYVQRALLDGYDIGPATLVRWYT 207
>UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;
n=1; Leptospirillum sp. Group II UBA|Rep: Cytochrome b
subunit of the bc complex - Leptospirillum sp. Group II
UBA
Length = 458
Score = 59.7 bits (138), Expect = 6e-08
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Frame = +2
Query: 119 LIIQIITGLFLTIYYTANIEIAFYRVNYICR----NVNYG*IIRTLHANGASFFFICIYL 286
LI+Q +TG+ L YY + A+ VNYI ++ G +IR H GAS + +
Sbjct: 50 LILQFVTGVMLAFYYGGTPDHAWDSVNYIDHLHYGTLDVGRLIRGFHYWGASIMVVLVGA 109
Query: 287 HIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIP 460
H+ + + ++ + + L Y+LP + ++WG V TN++ +P
Sbjct: 110 HLLQVFLWGAYKRPREIMWLVGVILLALTMTAAFTGYLLPWDERAYWGTIVGTNMIGLVP 169
Query: 461 YLGTILVN*I*GGFAVDNATLTRFY 535
+G +L + I GG + TL+ F+
Sbjct: 170 VVGPLLKSAIRGGSGLGALTLSHFF 194
>UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase
cytochrome b subunit; n=1; Blastopirellula marina DSM
3645|Rep: Menaquinol-cytochrome-c reductase cytochrome b
subunit - Blastopirellula marina DSM 3645
Length = 639
Score = 58.4 bits (135), Expect = 1e-07
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Frame = +2
Query: 122 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 301
++Q+ITG FL + Y+AN + A+ V YI + G I+R LH A + + LH +
Sbjct: 45 VVQMITGTFLWMAYSANSKGAWESVYYIQYEMQGGWILRGLHHFMAQAMIVLLALHFLQV 104
Query: 302 IYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 475
+ ++ ++ Y+LP Q +W V T L+ IP +G
Sbjct: 105 VIDGAYKAPREFNFWTGLILMKIVLGLSLTGYLLPWDQKGYWATKVATTLMGLIPAIGGD 164
Query: 476 LVN*I*GGFAVDNATLTRFY 535
L + GG +ATLTRF+
Sbjct: 165 LQKVVVGGTDYGHATLTRFF 184
>UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2;
Rubrobacter xylanophilus DSM 9941|Rep: Cytochrome
b/b6-like protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 257
Score = 58.0 bits (134), Expect = 2e-07
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Frame = +2
Query: 119 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 298
+ +Q +TG+ L YY + A+ V YI +G +IR +H A+F I +H+ R
Sbjct: 56 ITLQFLTGILLLFYYVPTTDHAWNSVYYIMNEAYFGKLIRGIHYWSANFLMAVIGMHMAR 115
Query: 299 GIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
+ ++ + + Y+L Q FW + V + S P+LG
Sbjct: 116 TFFSGAYKAPREMNWIVGVILLLLVIGLAFTGYLLRWDQDGFWASVVGIKIGSYSPFLGP 175
Query: 473 ILVN*I*GGFAVDNATLTRFY 535
+ + + GG V ATL+RF+
Sbjct: 176 YITHFLLGGDVVGPATLSRFF 196
>UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2;
Anaeromyxobacter|Rep: Cytochrome b/b6 domain -
Anaeromyxobacter sp. Fw109-5
Length = 448
Score = 58.0 bits (134), Expect = 2e-07
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Frame = +2
Query: 110 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 289
A L++ +++GL L + ++E A+ V I V +G IR++H A ++LH
Sbjct: 68 AALLLLLVVSGLPLLFLHVPSVERAYGSVKDIEYVVTFGSWIRSVHRIAAHLMVAAVFLH 127
Query: 290 IGR----GIYYESF----NLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 445
+ R G Y + ++ + Y+LP Q+++W TV TN+
Sbjct: 128 LVRVFLTGAYKNGTGRGQHREWNWVLGVVMFLVTLFLSFTGYLLPWDQLAYWAVTVGTNI 187
Query: 446 LSAIPYLGTILVN*I*GGFAVDNATLTRFY 535
SA+P +G + + GG +D TL RFY
Sbjct: 188 ASAVPLVGAEVRELLLGGRNIDQPTLIRFY 217
>UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle
sebastis|Rep: Cytochrome b - Microcotyle sebastis
Length = 386
Score = 57.6 bits (133), Expect = 3e-07
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 8/195 (4%)
Frame = +2
Query: 119 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVN------YG*IIRTLHANGASFFFICI 280
+ +Q++TG+F I Y + + VN ++R +H GAS FIC+
Sbjct: 47 MALQLVTGIFCAIEYLNLTKKHLFHVNVGVGEPGPIMDGLVSDLLRFMHLWGASLVFICL 106
Query: 281 YLHIGRGIYYESFNLKYV-*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAI 457
HIGRG+YY S++ V Y+LP Q+S+W VI+ + ++
Sbjct: 107 LGHIGRGLYYCSYSKNPVLWSFGMILYVVILIEAFLGYLLPWHQMSYWAGVVISTIFLSL 166
Query: 458 PYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNR 637
P +G L + + G + + +R + + GS+N
Sbjct: 167 PVIGPHLYSFLLGSYDFGDGIXSRVFCVHVCFGFVIIALIVLHLVNLHKIGSSNSFNSGD 226
Query: 638 NL-DKIPFHPFFTFK 679
+ D I FH + +K
Sbjct: 227 SYSDVIFFHXGYGYK 241
>UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase
cytochrome b subunit; n=24; Bacillaceae|Rep:
Menaquinol-cytochrome c reductase cytochrome b subunit -
Bacillus subtilis
Length = 224
Score = 57.6 bits (133), Expect = 3e-07
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Frame = +2
Query: 122 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR- 298
+IQ+++G+FLT+YY +I+ A+ V Y+ V +G I+R +H GAS + ++LH R
Sbjct: 53 VIQVLSGMFLTMYYVPDIKNAWESVYYLQNEVAFGQIVRGMHHWGASLVIVMMFLHTLRV 112
Query: 299 ---GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 469
G Y + L ++ Y+LP + + V + A P +G
Sbjct: 113 FFQGAYKKPRELNWI--VGVLIFFVMLGLGFTGYLLPWDMKALFATKVGLQIAEATPLIG 170
Query: 470 TILVN*I*GGFAVDNA-TLTRFY 535
T + + G + A TLTRF+
Sbjct: 171 TQVKTLLAGHPDIVGAQTLTRFF 193
>UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1;
Macaca fascicularis|Rep: Putative uncharacterized
protein - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 115
Score = 56.8 bits (131), Expect = 5e-07
Identities = 37/111 (33%), Positives = 56/111 (50%)
Frame = +1
Query: 139 WIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTRNLL*IF 318
W +N L + + L + Y P+ KL L+ S WS +L T+R+R LL +
Sbjct: 5 WPTISNTLLTGHLLRLLLNCTYHPRRKLRLDYSLSPRQWSLYALHLPFPTHRSRPLLWLI 64
Query: 319 *LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLFRN 471
+ + +Y Y ++N FH L +R NI LG N N+K I NP++RN
Sbjct: 65 SPSRNLKHRHYTPSYNHNNSFHGLRSPMRPNIILGSNSNHKPTISNPVYRN 115
>UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides
polygyrus|Rep: Cytochrome b - Heligmosomoides polygyrus
Length = 211
Score = 56.4 bits (130), Expect = 6e-07
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +2
Query: 182 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 328
AF V YI VNYG I R H NGAS FF+ +YLHI +G++ S+ LK
Sbjct: 2 AFNVVXYIMYEVNYGWIFRIFHFNGASLFFVFLYLHIFKGLFMMSYRLK 50
>UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:
Cytochrome b - Ovis aries (Sheep)
Length = 113
Score = 55.6 bits (128), Expect = 1e-06
Identities = 39/112 (34%), Positives = 57/112 (50%)
Frame = +1
Query: 85 LMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFI 264
+MK + + N ++ I +N L++ + NS L +LP+ KLWLN T
Sbjct: 1 MMKLWLSPRHLLNFTDSNRPIPSNTLYTXHNNSILLCNPHLPRRKLWLNYPIYTRKRGIN 60
Query: 265 FFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFL 420
FYL ++ RTR +L I L M + + I NS+ HRLC T+R NI L
Sbjct: 61 IFYLPIYACRTRPILWIIYLPRNMKHRSNPPICDNSHSIHRLCFTMRPNIXL 112
>UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 499
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/140 (22%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Frame = +2
Query: 122 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 301
++Q++TG+ L + Y + A+ + + +++ G IR LH G++F + +H+ +
Sbjct: 49 LLQMVTGILLALIYVPSAGEAWNSLQTLNHSISMGWFIRALHGWGSNFMIAVVLVHMAQV 108
Query: 302 IYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 475
+ ++ + + V+ Q ++WG + +++S +P LG
Sbjct: 109 FLFGAYKYPRELTWILGVFLLLVTLAMGFTGQVMRFDQDAYWGLGIGASIVSRVPLLGPW 168
Query: 476 LVN*I*GGFAVDNATLTRFY 535
LV + GG + ATL+RF+
Sbjct: 169 LVTLVLGGPIIAGATLSRFF 188
>UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 281
Score = 54.4 bits (125), Expect = 2e-06
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = +2
Query: 122 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 301
I + TG L YY + +AF + Y+ +V +G ++R +H GA I + LH+ R
Sbjct: 82 ITLVFTGTLLMFYYHPSKVVAFRDILYLESDVPFGKLLRNMHRWGAHLMVIMVELHMFRV 141
Query: 302 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 469
S+ ++ + Y+LP Q+ FW TV TN+ A P LG
Sbjct: 142 FLTGSYKKPREFNWVVGVLLLVLTLLLSFTGYLLPDDQLGFWAVTVGTNMARATPLLG 199
>UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b
subunit; n=11; Chlorobiaceae|Rep: Cytochrome bc complex
cytochrome b subunit - Chlorobium tepidum
Length = 428
Score = 54.4 bits (125), Expect = 2e-06
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
Frame = +2
Query: 122 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 301
IIQI+TGL L YY AF +I V +G +IR +HA A+ + +++H+
Sbjct: 118 IIQILTGLLLLQYYKPTETDAFSSFLFIQGQVPFGWLIRQIHAWSANLMILMLFIHMFST 177
Query: 302 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 475
+ +S+ + + + Y+LP +++F+ V T + P G
Sbjct: 178 FFMKSYRKPRELLWVSGFILLVLTLGFGFTGYLLPWNELAFFATQVGTEVPKVAPG-GAF 236
Query: 476 LVN*I*GGFAVDNATLTRFYT 538
LV + GG V TLTR ++
Sbjct: 237 LVEILRGGPDVSGETLTRMFS 257
>UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:
Cytochrome b - Elephas maximus (Indian elephant)
Length = 102
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2
Query: 116 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRT 241
CL+ QI+TGLFL I Y + AF +++ICR+VNYG IIRT
Sbjct: 8 CLVAQILTGLFLAIRYAPDTITAFSSISHICRDVNYGWIIRT 49
>UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris DSM
8797|Rep: Cytochrome b6 - Planctomyces maris DSM 8797
Length = 665
Score = 53.2 bits (122), Expect = 6e-06
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
L ++++++TG L Y+ + A+ V+YI V+ G +R LH A + I +HI
Sbjct: 46 LMMLVEMVTGALLMTVYSPSEASAWGSVHYIETQVDLGWFVRGLHHYTAHMMIVAIVVHI 105
Query: 293 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
I + +++ LP Q +W + T + +P +
Sbjct: 106 FLVIISAGYRKPKEFIYWTSLLIGGVIIGLTITGNPLPWDQKGYWSYQIETGIAGTMPVI 165
Query: 467 GTILVN*I*GGFAVDNATLTRFYT 538
G+ L + + GG N TLTR YT
Sbjct: 166 GSTLRSLVVGGSEFGNLTLTRLYT 189
>UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep:
Cytochrome oxidase B - Pyura haustor
Length = 137
Score = 53.2 bits (122), Expect = 6e-06
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = +2
Query: 416 FWGA-----TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXX 580
FWG +VI NLL+ IP++G VN GGF V ATLTRFYT
Sbjct: 2 FWGQGGFEESVIPNLLNPIPFIGGDTVNWAWGGFFVGGATLTRFYTFHFLFPFILVVLSM 61
Query: 581 XXXXXXXQTGSNNPLGLNRNLDKIPFHPF 667
+ GS+NPL N K+ F P+
Sbjct: 62 LHLVFLHEGGSSNPLKGTNNSFKVWFWPY 90
>UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 545
Score = 52.4 bits (120), Expect = 1e-05
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
Frame = +2
Query: 122 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 301
++Q TG+ L Y A+ + YI + G ++R LH GAS + + LH+ +
Sbjct: 49 MVQAFTGILLAFNYAPTPGEAYNSLRYILTELTAGRLMRGLHHWGASMIIVVVVLHMVQV 108
Query: 302 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 475
Y ++ + + Y+LP ++WG V T + + P +G
Sbjct: 109 FLYGAYKKPREATWMVGVVLFLVTLAYGLTGYLLPWDNRAYWGTVVATKIAAQAPVVGPY 168
Query: 476 LVN*I*GGFAVDNATLTRFY 535
L + G +V T RFY
Sbjct: 169 LSRLLGGEGSVGVVTFARFY 188
>UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Cytochrome b/b6,
N-terminal domain - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 358
Score = 51.2 bits (117), Expect = 2e-05
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Frame = +2
Query: 110 ALCLIIQI-ITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYL 286
+L L++ + ++G FL YY+ A+ V++ +V +G I+R +H + + + L
Sbjct: 44 SLVLVVMLFLSGAFLMFYYSPTPGAAYDSVDFAQFSVPFGDIVRGVHYYAWNLLLVVLGL 103
Query: 287 HIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIP 460
H+ ++ ++V + +LP Q +W V +++S+IP
Sbjct: 104 HLAGTFLTAAYQAPRQFVWISGVLIMLVVPLFIITGDLLPWDQKGYWTTQVRNSIISSIP 163
Query: 461 YLGTILVN*I*GGFAVDNATLTRFY 535
+G + + + GG TLTRFY
Sbjct: 164 VVGDLTLRLLQGGPRTGIVTLTRFY 188
>UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula
marina DSM 3645|Rep: Apocytochrome b6 - Blastopirellula
marina DSM 3645
Length = 494
Score = 50.8 bits (116), Expect = 3e-05
Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Frame = +2
Query: 119 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 298
L++QI+TG+ L + Y A+ + Y+ +G ++R +H A+ + + +H+ +
Sbjct: 51 LMLQIVTGVCLAMIYQPTAADAYASLEYLNYEAPFGWLLRAIHYWSATGMVVMLMVHMTQ 110
Query: 299 GIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
+F + + VL S+WG +V + +P+ G
Sbjct: 111 VFLMGAFKYPRELTWIVGVGLLTTTLVLAFTGQVLRYDGDSYWGVSVAVSAAGRVPFAGP 170
Query: 473 ILVN*I*GGFAVDNATLTRFYT 538
+V+ I GG + + TL+RF+T
Sbjct: 171 SIVHLILGGEYIGSETLSRFFT 192
>UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:
Cytochrome b - Partula turgida
Length = 211
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/62 (38%), Positives = 32/62 (51%)
Frame = +2
Query: 494 GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFT 673
GGF+V ATL RF++ + GS NPLG N +++KI FHP+FT
Sbjct: 6 GGFSVGQATLNRFFSLHFILPFIILVLVIVHLMFLHEKGSTNPLGHNMHINKILFHPYFT 65
Query: 674 FK 679
K
Sbjct: 66 LK 67
>UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus
russelli|Rep: Cytochrome b - Decapterus russelli (Indian
scad)
Length = 102
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 115 MSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYR 294
+ N N +W + + LH ++ N F +LP+CKL L +S TC W + +L+L +YR
Sbjct: 7 LPNYPNPHWTLPCHTLHLRHRNCFHIRCTHLPRCKLRLTHSQHTCQWRILLLHLYLSSYR 66
Query: 295 TRNLL 309
+R +L
Sbjct: 67 SRPIL 71
>UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Rep:
Cytochrome b6 - Halobacterium salinarium (Halobacterium
halobium)
Length = 270
Score = 50.0 bits (114), Expect = 5e-05
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYY-------TANIE---IAFYRVNYICRNVNYG*IIRTLHANGAS 262
L ++ I+G L YY T ++ +A+ V I ++N+G +R+LH A
Sbjct: 87 LSYVVAAISGALLGFYYSPSAAAATCGVDGSTVAYCAVAGIMTDLNFGFFLRSLHRWAAQ 146
Query: 263 FFFICIYLHIGR----GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 430
++LH+ R G Y E + + L Y+LP Q+++W
Sbjct: 147 VMTAAVFLHMLRVYFTGSYKEPREVNW--LIGIVLLSLTMVFGYTGYLLPWDQLAYWAGQ 204
Query: 431 VITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 535
+ + +IP +G + + GGF++ ATL R Y
Sbjct: 205 IGVEMSLSIPLVGDWVAQLMFGGFSLGQATLQRMY 239
>UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 438
Score = 49.6 bits (113), Expect = 7e-05
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Frame = +2
Query: 122 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 301
+I + TG+ L YY + A+ R+ + V +G +R +H A ++LH+ R
Sbjct: 81 VILVATGILLMFYYVPSTTQAYDRMLDLRGTVAFGTFLRNMHRWSAHGMVAIVFLHMCRV 140
Query: 302 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 475
+ S+ ++ + Y+LP Q++FW TV T++ P +G
Sbjct: 141 FFTGSYKKPREFNWVLGVVLFLLTLFLSFTGYLLPWDQLAFWAITVGTSIAGYAPVVGQD 200
Query: 476 LVN*I*GGFAVDNATLTRFY 535
+ + G V L RFY
Sbjct: 201 IKFLLLGDATVGQEALLRFY 220
>UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Cytochrome b/b6-like
protein - Plesiocystis pacifica SIR-1
Length = 587
Score = 48.0 bits (109), Expect = 2e-04
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Frame = +2
Query: 128 QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIY 307
Q++ G+ L YY+ + A+ YI V G +R LH +G+S + LH+ + +
Sbjct: 47 QVVLGILLATYYSPSATDAWASTAYIQDQVAGGWFLRGLHHHGSSAMVVVTLLHLMQVVL 106
Query: 308 YESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 481
++ + Y+LP Q +W V T ++ +P G +
Sbjct: 107 AGAYRAPREVNWWTGLAMGGLVLAFALTGYLLPWDQKGYWATQVATGIMGTVPG-GEPMQ 165
Query: 482 N*I*GGFAVDNATLTRFY 535
+ + GG N T+TRFY
Sbjct: 166 HALQGGDQYGNLTITRFY 183
>UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep:
Cytochrome b - Eulemur mongoz (Mongoose lemur)
Length = 59
Score = 47.2 bits (107), Expect = 4e-04
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +2
Query: 251 NGASFFFICIYLHIGRGIYYESFNL 325
NGAS FF+C+++HIGRG+YY SF L
Sbjct: 21 NGASMFFLCLFIHIGRGLYYGSFTL 45
>UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1;
Chlorobium phaeobacteroides BS1|Rep: Cytochrome b/b6,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 333
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +2
Query: 389 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 535
Y+LP Q+S+W T++TN+L +P +G L + GG V+ TL+ FY
Sbjct: 45 YLLPWDQLSYWAVTIMTNILEYLPLVGNNLAIIVRGGEYVNGNTLSIFY 93
>UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=2; Leishmania amazonensis|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Leishmania amazonensis
Length = 250
Score = 44.4 bits (100), Expect = 0.003
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Frame = +2
Query: 122 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 301
++ ++ FL + + I I +Y + V++ +IR+ H S F +Y+HI
Sbjct: 17 VVCVVHDFFLVVLFV-QIGILYYFYEILI--VDF--VIRSTHICFTSLLFFLLYIHIFIK 71
Query: 302 -----IYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 466
I +++ L +V YVLP +S+WG TV +N+L+ +P +
Sbjct: 72 CIVLIILFDTHILVWV--VGFVIYIFIVIIGFIGYVLPCTMMSYWGLTVFSNILATVPVI 129
Query: 467 GTILVN*I*GGFAVDNATLTRFY 535
GT L I G +++ TL + +
Sbjct: 130 GTWLCYWIWGSEYINDFTLLKLH 152
>UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:
Cytochrome b - Trypanoplasma borreli
Length = 372
Score = 44.4 bits (100), Expect = 0.003
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Frame = +2
Query: 119 LIIQIITGLFLT-IYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 295
+ +QI+ G+ L+ ++ I + I + G IIR+LH S + +Y+HI
Sbjct: 40 IALQILVGICLSWFFFRCIIPQNWIFTLLIHLEFDLGFIIRSLHIIFTSLLYFLLYIHII 99
Query: 296 RGIY----YESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 463
+ I+ ++S L + Y LP +S+WG TV +N+L+ IP
Sbjct: 100 KVIFLCLIFDSSMLVW--FFGFLIFIFILIIAFIGYTLPCTSMSYWGLTVFSNILATIPL 157
Query: 464 LGTILVN*I*GGFAVDNATLTRFYT 538
+G + I +++ TL + ++
Sbjct: 158 IGIYICQWIWCSEFINDFTLLKLHS 182
>UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum
lineare|Rep: Cytochrome b - Microstomum lineare
Length = 234
Score = 42.3 bits (95), Expect = 0.011
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +2
Query: 428 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 607
+V TN LS +PYLG L+ I GG V ++ RF++ +
Sbjct: 3 SVXTNFLSTLPYLGVFLLYSIWGGLNVCEISVYRFFSLHFIMPFVLVVLSIIHMAMLHVS 62
Query: 608 GSNNPLGLNRNLDKIPFHPFFTFK 679
S+NPL +N N D + F P+F K
Sbjct: 63 VSSNPLHIN-NKDFLSFFPYFWSK 85
>UniRef50_Q91096 Cluster: Cytochrome b; n=2; Malaconotidae|Rep:
Cytochrome b - Laniarius aethiopicus
Length = 98
Score = 41.9 bits (94), Expect = 0.014
Identities = 29/96 (30%), Positives = 46/96 (47%)
Frame = +1
Query: 100 IPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLH 279
+P M N++N + ++ L S++ S ++PK + + N TC S YLH
Sbjct: 3 LPARPMLNHTNCHRTTTSHALXSRHYPSLFLRSPHMPKRTIRMTNPKPTCKRSLPILYLH 62
Query: 280 LFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHR 387
L T+ TR LL + + + +Y NSNCF R
Sbjct: 63 LPTHWTRILLWLISKQRNLKRRSYPTPNPNSNCFRR 98
>UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon
domesticum|Rep: Cytochrome b - Trichosporon domesticum
Length = 132
Score = 41.9 bits (94), Expect = 0.014
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +2
Query: 440 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 538
N+LSAIP++G V + GGF+V+NATL RF++
Sbjct: 28 NMLSAIPWIGQDFVEFVWGGFSVNNATLNRFFS 60
Score = 40.3 bits (90), Expect = 0.042
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2
Query: 608 GSNNPLGLNRNLDKIPFHPFFTFK 679
GS+NPLG++ N D+IP HP++ FK
Sbjct: 2 GSSNPLGISSNSDRIPMHPYYMFK 25
>UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter
violaceus|Rep: Cytochrome b6 - Gloeobacter violaceus
Length = 217
Score = 41.5 bits (93), Expect = 0.018
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Frame = +2
Query: 119 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 298
L++ ++TG+ L + ++ A+ I ++G +R LH +S +C
Sbjct: 50 LVLALLTGVLLGANFVPSLG-AYDSTRQITYQTSFGWAVRGLHWWASSLTLVCSLAFTAL 108
Query: 299 GIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 472
+Y F K++ Y LP Q ++W + NLL+ +P LG
Sbjct: 109 AYWYGYFRGPAKWMWWTGLVMGLMLLGANVTGYYLPLDQNAYWRLMIEANLLADVPVLGA 168
Query: 473 ILVN*I*GGFAVDNATLTRFY 535
+ + G V +A++ R +
Sbjct: 169 AVKYFLLNGSGVSDASIARIH 189
>UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Rep:
Cytochrome b - Aegotheles savesi (New Caledonian
owlet-nightjar)
Length = 96
Score = 40.7 bits (91), Expect = 0.032
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 119 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNY 223
L+ I+TGL L ++YTA+ +AF V + CRNV Y
Sbjct: 4 LVTXILTGLLLAMHYTADATLAFSSVAHTCRNVQY 38
>UniRef50_Q748R9 Cluster: Cytochrome b/b6; n=7;
Desulfuromonadales|Rep: Cytochrome b/b6 - Geobacter
sulfurreducens
Length = 206
Score = 40.7 bits (91), Expect = 0.032
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 2/137 (1%)
Frame = +2
Query: 131 IITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYY 310
I++G+ L YY + AF + ++ V G +R LH + F ++LHI R +
Sbjct: 39 IVSGVLLLFYYQPTPDRAFDSILFLESTVVGGKYLRALHRLASHGFLCLMFLHILRVVLT 98
Query: 311 ESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN 484
+F + + Y+LP Q++FW LL+ P G +
Sbjct: 99 GAFRPPRELTWVVGVGLLGLSVFEAYTGYLLPMDQLAFWATRTGMELLATFPGGGWLRAV 158
Query: 485 *I*GGFAVDNATLTRFY 535
+ G ++ +L RFY
Sbjct: 159 LVPDGVG-ESLSLLRFY 174
>UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5;
Sulfolobaceae|Rep: Quinol oxidase-2, cytochrome b -
Sulfolobus solfataricus
Length = 549
Score = 39.1 bits (87), Expect = 0.098
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +2
Query: 122 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 301
I+++ITG + +YYT + + Y+ V YG + +LH+ GA + +H+ R
Sbjct: 90 ILEVITGALVALYYTPS--DPYTSTTYLISKVPYGAFLFSLHSWGAYAMVFLLLVHMTRN 147
Query: 302 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY-LGT 472
+ ++ + + + Y LP IS+ T NL S +P+ LG
Sbjct: 148 FFVGAYRQPREIMWIVGAGLAGLTLTEAYLGYSLPYNLISWVATTTGLNLFSYMPFNLGY 207
Query: 473 IL 478
++
Sbjct: 208 LI 209
>UniRef50_Q97BT4 Cluster: Cytochrome b; n=2; Thermoplasma|Rep:
Cytochrome b - Thermoplasma volcanium
Length = 537
Score = 39.1 bits (87), Expect = 0.098
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +2
Query: 122 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 301
+ +++TG+ L YY + A+ +V YG II T H GA +Y+H+ R
Sbjct: 49 LYEVVTGIILLFYYQPSN--AYTSTETFLHSVPYGEIILTTHLYGAYIMIALVYIHLLRN 106
Query: 302 IYYESF 319
I+ ++
Sbjct: 107 IFVGAY 112
>UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Rep:
Cytochrome b - Lyristes plebejus
Length = 132
Score = 38.7 bits (86), Expect = 0.13
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +1
Query: 460 LFRNYISKLNLRGICCR*CYINPILHISFFITVHY 564
L YISKLNL ICC N IL +FF T+HY
Sbjct: 14 LIXEYISKLNLSWICCWQRNFNTILFTTFFNTLHY 48
>UniRef50_P39480 Cluster: Cytochrome b; n=5; Sulfolobaceae|Rep:
Cytochrome b - Sulfolobus acidocaldarius
Length = 563
Score = 38.7 bits (86), Expect = 0.13
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 131 IITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIY 307
IITGLFL +YY A+ I +V YG ++ H G+ + Y+H+ R Y
Sbjct: 51 IITGLFLLLYYQP--AFAYQSTQTIINSVPYGSVLLFSHLYGSYIMILLAYIHMFRNFY 107
>UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_110, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 184
Score = 37.9 bits (84), Expect = 0.23
Identities = 29/86 (33%), Positives = 39/86 (45%)
Frame = +2
Query: 410 ISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXX 589
+SFWGAT T + Y + + G F D ATL F++
Sbjct: 1 MSFWGATHHTY---SRRYHNDLAL----GWFLYD-ATLNYFFSLHHLLSFVLVGDILFHL 52
Query: 590 XXXXQTGSNNPLGLNRNLDKIPFHPF 667
Q GSNNPLG++ LDKI F+P+
Sbjct: 53 VALHQYGSNNPLGVHLELDKISFYPY 78
>UniRef50_Q5BLW9 Cluster: Cytochrome b; n=1; Pseudourostyla
cristata|Rep: Cytochrome b - Pseudourostyla cristata
Length = 393
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +2
Query: 113 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 292
+ +++Q+++G FL YY + + + +G + +H G F+ YLHI
Sbjct: 42 IAIVLQVLSGFFLGWYYIPEPGLVVELREEMFNDTRFGAEVFYMHVRGVDTIFVLSYLHI 101
Query: 293 GRGIYYESF 319
+ IY +++
Sbjct: 102 LKKIYLKNY 110
>UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=1; Triticum timopheevii|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Triticum timopheevi (Sanduri wheat)
Length = 207
Score = 37.5 bits (83), Expect = 0.30
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 257 ASFFFICIYLHIGRGIYYESFNLKYV 334
AS FFI +YLHI RG+YY S+ ++V
Sbjct: 23 ASMFFIVVYLHIFRGLYYASYPREFV 48
>UniRef50_Q9I8C6 Cluster: Cytochrome b; n=2; Phasianidae|Rep:
Cytochrome b - Gallus gallus (Chicken)
Length = 113
Score = 35.5 bits (78), Expect = 1.2
Identities = 28/103 (27%), Positives = 55/103 (53%)
Frame = +1
Query: 85 LMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFI 264
+MK+R+P S + ++ N + ++ LHS++ S L +LP+ + L + I
Sbjct: 1 MMKFRLPISSLPHDPNPHRPTTSHALHSRHIPSLLLRSPHLPERTIRLTHPESPRKRRLI 60
Query: 265 FFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLC 393
+L+L ++RTR +L + L+ + + + +T+S HRLC
Sbjct: 61 LLHLYLPSHRTRPILRLLPLQGNLKHRSNPPPHTHS---HRLC 100
>UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus
rugulosus|Rep: Cytochrome b - Hoplobatrachus rugulosus
Length = 112
Score = 34.3 bits (75), Expect = 2.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 427 NRNYKSIICNPLFRNYISKLNLRGICCR*CYINPILHIS 543
N ++KS IC P++ + +NL + CR + N ILH+S
Sbjct: 2 NSHHKSSICGPIYWHRPRPMNLGWVFCRQRHANSILHLS 40
>UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxillary
apomucin, partial; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to submaxillary apomucin, partial -
Monodelphis domestica
Length = 745
Score = 33.9 bits (74), Expect = 3.7
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3
Query: 456 IADNRFVITVAPQKDI*PQGKT 391
+AD R ITVAPQKDI P G T
Sbjct: 1 MADRRLAITVAPQKDICPHGNT 22
>UniRef50_Q9B903 Cluster: Cytochrome b; n=1; Petrodromus
tetradactylus|Rep: Cytochrome b - Petrodromus
tetradactylus (Four-toed elephant shrew)
Length = 82
Score = 33.9 bits (74), Expect = 3.7
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 130 NYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTRNLL 309
N W I ++ LH ++ + L S +LP KL + N C S YL +++ RTR LL
Sbjct: 8 NPNWPIPSHALHLRHPHRILLSNPHLPGRKLRMTNPLYPCQRSLPILYLPIYSRRTRYLL 67
>UniRef50_Q4YBP9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 358
Score = 33.9 bits (74), Expect = 3.7
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +1
Query: 145 IFNNILH--SKY*NSFL*SKLYLPKCKLWLNNSNITC*WSF--IFFYLHLFTYRTRNLL* 312
IFN +LH + Y N + KLYL L+ N S I +SF IFF+L +F Y + +
Sbjct: 281 IFNTVLHWINIYLNFTMSKKLYLKYKTLYKNISFIFSYFSFDEIFFFLLIF-YSSFFITS 339
Query: 313 IF*LKICMINWNYNFI 360
L +C+ + YNFI
Sbjct: 340 SL-LSLCLFYYIYNFI 354
>UniRef50_Q703H8 Cluster: Cytochrome b; n=2; Halobacteriaceae|Rep:
Cytochrome b - Halobacterium mediterranei (Haloferax
mediterranei)
Length = 485
Score = 33.1 bits (72), Expect = 6.4
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 21/161 (13%)
Frame = +2
Query: 116 CLIIQIITGLFLTIYY---TANIEI--------------AFYRVNYICRNVNYG*IIRTL 244
C ++ ++TG+FL +++ T++++ AF V +I ++ +G IR +
Sbjct: 54 CFLLLVLTGMFLGMFFEPSTSDVKYEGSVAKFQGEEVPEAFASVLHITYDIPFGMFIRRM 113
Query: 245 HANGASFFFICIYLHIGR----GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQI 412
H A F I LH+ R G Y +V Y LP +
Sbjct: 114 HHWAAHLFVASIGLHMLRVFFTGAYRNPREPNWV--VGTALAGLSMGAAYTGYALPFDEF 171
Query: 413 SFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 535
+ + NL ++IP +G ++ GG +AT+ R Y
Sbjct: 172 AATATGIGYNLATSIPLVGEVIGKAFFGGEFPSSATIPRLY 212
>UniRef50_Q2W546 Cluster: Cytochrome b subunit of the bc complex;
n=4; Magnetospirillum|Rep: Cytochrome b subunit of the
bc complex - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 524
Score = 32.7 bits (71), Expect = 8.5
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 137 TGLFLTIYYTANIEIAFYRVNYICRNVNY-G*IIRTLHANGASFFFICIYLHIGR 298
+GL+L + Y + A+ + YI R Y G +IR+LH G+ + + LH+ R
Sbjct: 48 SGLYLFVPYDTSAVRAWNSIEYISREQWYWGGLIRSLHRYGSDAMVLTMMLHLVR 102
>UniRef50_Q9AVX9 Cluster: Putative U5 snRNP-specific protein; n=1;
Guillardia theta|Rep: Putative U5 snRNP-specific protein
- Guillardia theta (Cryptomonas phi)
Length = 1436
Score = 32.7 bits (71), Expect = 8.5
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Frame = +1
Query: 121 NNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTR 300
N S FNN+ HSK + FL K+ L+ + C +++ F ++ Y +
Sbjct: 1224 NKSGLKNFYFNNVKHSKVEDKFL--KITKLHKNLFYKSDKKKC-LNYLLFIFYI--YNWK 1278
Query: 301 NLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLFRN-YI 477
NL L IC I NY F Y+ + L+ FL RN K II F N Y
Sbjct: 1279 NLYLNEKLNIC-IKQNY-FYYSGFLYYDYNIKKLKK--FLAFFRNSKIIIIREKFINLYS 1334
Query: 478 SKLNLRGIC 504
S+++L C
Sbjct: 1335 SEISLSNSC 1343
>UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium
falciparum|Rep: Rps17 protein - Plasmodium falciparum
Length = 74
Score = 32.7 bits (71), Expect = 8.5
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -1
Query: 218 LHFGKYNLLYKKLFQYLLCNILLKIIQ**FELLDIKLVGILYFIKKKY 75
+ F KYN YKKL LLCN+ +KI E++ + Y+ K KY
Sbjct: 21 ISFYKYNFKYKKL---LLCNLYIKIYDNRNEIIINDYILFKYYKKSKY 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,781,603
Number of Sequences: 1657284
Number of extensions: 9152648
Number of successful extensions: 16970
Number of sequences better than 10.0: 126
Number of HSP's better than 10.0 without gapping: 16209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16837
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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