Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0087
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   2.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.1  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -2

Query: 176 RDLSGRFIFNYVFV 135
           + L+G+F+ NY+F+
Sbjct: 359 QQLAGKFLLNYIFI 372


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 245 VFYKDGSTFQAGASDC 198
           V +KD ST   G SDC
Sbjct: 193 VLWKDKSTDNEGVSDC 208


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 165 WKIYFQLCFCSFVYLPIDAAT 103
           + I F LC  +F  LP++  T
Sbjct: 196 YNIVFGLCLTTFGLLPVNGVT 216


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 203 DCVQQNFSCRDLSGRFIFNYVFVVSFI 123
           D +     CRD    ++F Y F V+ +
Sbjct: 106 DLLSNAVFCRDRVNPYLFYYAFSVALL 132


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 310 LSIFCLVSSVFTVNEIFFTMRMYFTKT 230
           LS    + +  TV  IFF    Y TKT
Sbjct: 148 LSGLVTIVATLTVTIIFFASYQYGTKT 174


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 310 LSIFCLVSSVFTVNEIFFTMRMYFTKT 230
           LS    + +  TV  IFF    Y TKT
Sbjct: 148 LSGLVTIVATLTVTIIFFASYQYGTKT 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,045
Number of Sequences: 336
Number of extensions: 2736
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)