Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0086
         (682 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ005576-1|AAY55948.1|  464|Homo sapiens mitochondrial methionin...   131   3e-30
BC113644-1|AAI13645.1|  335|Homo sapiens methionine aminopeptida...   131   3e-30
AY374142-1|AAR27795.1|  335|Homo sapiens mitochondrial methionin...   131   3e-30
D42084-1|BAA07679.1|  394|Homo sapiens KIAA0094 protein.              127   4e-29
BC030054-1|AAH30054.1|  272|Homo sapiens methionyl aminopeptidas...   116   8e-26

>DQ005576-1|AAY55948.1|  464|Homo sapiens mitochondrial methionine
           aminopeptidase 3 protein.
          Length = 464

 Score =  131 bits (316), Expect = 3e-30
 Identities = 60/119 (50%), Positives = 82/119 (68%)
 Frame = +1

Query: 211 VPDTIERPDYLARGKQLTLPCLPEIKDDNQLKGMRTSCKLASTILSQVQNFIKPGVTTDD 390
           VP  I++PDY+  G         E+K+++Q++G+  +C+LA  +L      +K  +TT++
Sbjct: 193 VPKHIKKPDYVTTGIVPDWGDSIEVKNEDQIQGLHQACQLARHVLLLAGKSLKVDMTTEE 252

Query: 391 IDQLVHSLIIKAGAYPSPLHYKGFPKSICTSVNNVAVHGIPDLRPLSDGDIVNVDITVF 567
           ID LVH  II   AYPSPL Y GFPKS+CTSVNNV  HGIPD RPL DGDI+N+D+TV+
Sbjct: 253 IDALVHREIISHNAYPSPLGYGGFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVY 311


>BC113644-1|AAI13645.1|  335|Homo sapiens methionine aminopeptidase
           1D protein.
          Length = 335

 Score =  131 bits (316), Expect = 3e-30
 Identities = 60/119 (50%), Positives = 82/119 (68%)
 Frame = +1

Query: 211 VPDTIERPDYLARGKQLTLPCLPEIKDDNQLKGMRTSCKLASTILSQVQNFIKPGVTTDD 390
           VP  I++PDY+  G         E+K+++Q++G+  +C+LA  +L      +K  +TT++
Sbjct: 64  VPKHIKKPDYVTTGIVPDWGDSIEVKNEDQIQGLHQACQLARHVLLLAGKSLKVDMTTEE 123

Query: 391 IDQLVHSLIIKAGAYPSPLHYKGFPKSICTSVNNVAVHGIPDLRPLSDGDIVNVDITVF 567
           ID LVH  II   AYPSPL Y GFPKS+CTSVNNV  HGIPD RPL DGDI+N+D+TV+
Sbjct: 124 IDALVHREIISHNAYPSPLGYGGFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVY 182


>AY374142-1|AAR27795.1|  335|Homo sapiens mitochondrial methionine
           aminopeptidase 1 protein.
          Length = 335

 Score =  131 bits (316), Expect = 3e-30
 Identities = 60/119 (50%), Positives = 82/119 (68%)
 Frame = +1

Query: 211 VPDTIERPDYLARGKQLTLPCLPEIKDDNQLKGMRTSCKLASTILSQVQNFIKPGVTTDD 390
           VP  I++PDY+  G         E+K+++Q++G+  +C+LA  +L      +K  +TT++
Sbjct: 64  VPKHIKKPDYVTTGIVPDWGDSIEVKNEDQIQGLHQACQLARHVLLLAGKSLKVDMTTEE 123

Query: 391 IDQLVHSLIIKAGAYPSPLHYKGFPKSICTSVNNVAVHGIPDLRPLSDGDIVNVDITVF 567
           ID LVH  II   AYPSPL Y GFPKS+CTSVNNV  HGIPD RPL DGDI+N+D+TV+
Sbjct: 124 IDALVHREIISHNAYPSPLGYGGFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVY 182


>D42084-1|BAA07679.1|  394|Homo sapiens KIAA0094 protein.
          Length = 394

 Score =  127 bits (306), Expect = 4e-29
 Identities = 66/135 (48%), Positives = 82/135 (60%), Gaps = 8/135 (5%)
 Frame = +1

Query: 187 YETTPSRVVPDTIERPDY------LARGKQLTLPCLPEIK--DDNQLKGMRTSCKLASTI 342
           Y   P+R VP  I+RPDY      ++  +Q  L    +IK      ++GMR  C+LA  +
Sbjct: 99  YPLMPTRPVPSYIQRPDYADHPLGMSESEQ-ALKGTSQIKLLSSEDIEGMRLVCRLAREV 157

Query: 343 LSQVQNFIKPGVTTDDIDQLVHSLIIKAGAYPSPLHYKGFPKSICTSVNNVAVHGIPDLR 522
           L      IKPGVTT++ID  VH   I    YPSPL+Y  FPKS CTSVN V  HGIPD R
Sbjct: 158 LDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRR 217

Query: 523 PLSDGDIVNVDITVF 567
           PL +GDIVNVDIT++
Sbjct: 218 PLQEGDIVNVDITLY 232


>BC030054-1|AAH30054.1|  272|Homo sapiens methionyl aminopeptidase 1
           protein.
          Length = 272

 Score =  116 bits (279), Expect = 8e-26
 Identities = 52/96 (54%), Positives = 64/96 (66%)
 Frame = +1

Query: 280 EIKDDNQLKGMRTSCKLASTILSQVQNFIKPGVTTDDIDQLVHSLIIKAGAYPSPLHYKG 459
           ++     ++GMR  C+LA  +L      IKPGVTT++ID  VH   I    YPSPL+Y  
Sbjct: 15  KLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYN 74

Query: 460 FPKSICTSVNNVAVHGIPDLRPLSDGDIVNVDITVF 567
           FPKS CTSVN V  HGIPD RPL +GDIVNVDIT++
Sbjct: 75  FPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLY 110


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,798,602
Number of Sequences: 237096
Number of extensions: 1950783
Number of successful extensions: 2567
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2566
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)