Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0079
(710 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051762-1|AAK93186.1| 737|Drosophila melanogaster LD29090p pro... 180 1e-45
AE014297-705|AAN14307.1| 737|Drosophila melanogaster CG7602-PB,... 180 1e-45
AE014297-704|AAF54198.1| 737|Drosophila melanogaster CG7602-PA,... 180 1e-45
AB049434-1|BAB15800.1| 737|Drosophila melanogaster dpol-iota pr... 180 1e-45
AY058771-1|AAL14000.1| 885|Drosophila melanogaster SD05329p pro... 69 8e-12
AE014296-3638|AAF51794.1| 885|Drosophila melanogaster CG7143-PA... 69 8e-12
AB049433-1|BAB15799.1| 885|Drosophila melanogaster dpol-eta pro... 69 8e-12
AB036766-1|BAB20905.1| 885|Drosophila melanogaster DNA polymera... 69 8e-12
AE014296-120|AAF47401.1| 995|Drosophila melanogaster CG12189-PA... 52 1e-06
AB049435-1|BAB15801.1| 995|Drosophila melanogaster dREV1 protein. 52 1e-06
AY051778-1|AAK93202.1| 354|Drosophila melanogaster LD30318p pro... 29 6.2
AE014134-109|AAF51493.1| 354|Drosophila melanogaster CG4164-PA ... 29 6.2
AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p pro... 29 8.2
AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA... 29 8.2
>AY051762-1|AAK93186.1| 737|Drosophila melanogaster LD29090p
protein.
Length = 737
Score = 180 bits (439), Expect = 1e-45
Identities = 93/181 (51%), Positives = 126/181 (69%), Gaps = 6/181 (3%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
H ++IIH+D+D FYAQVE +R+P LR LGIQQKNIVVT NY AR GV+K ML+ +A
Sbjct: 13 HQRTIIHLDMDYFYAQVEEIRDPTLRSKALGIQQKNIVVTCNYVARAKGVTKLMLIAEAQ 72
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANL 545
++CP+L LVNGEDL YR S ++F +L + VEKLG DENF+DVT+LVE L+ A++
Sbjct: 73 RICPDLVLVNGEDLAPYRQMSQRIFDLLLNYTPLVEKLGFDENFMDVTALVE--LRQAHV 130
Query: 546 NDLIV---MGQLY---SEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHN 707
+ ++ +G Y P + C CGC RL I ++IA E+R+++ LG T CAGIA+N
Sbjct: 131 AEALLRPPVGHTYPADGTPLSNCDCGCAQRLAIGTRIAQEIREELKLRLGITCCAGIAYN 190
Query: 708 K 710
K
Sbjct: 191 K 191
>AE014297-705|AAN14307.1| 737|Drosophila melanogaster CG7602-PB,
isoform B protein.
Length = 737
Score = 180 bits (439), Expect = 1e-45
Identities = 93/181 (51%), Positives = 126/181 (69%), Gaps = 6/181 (3%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
H ++IIH+D+D FYAQVE +R+P LR LGIQQKNIVVT NY AR GV+K ML+ +A
Sbjct: 13 HQRTIIHLDMDYFYAQVEEIRDPTLRSKALGIQQKNIVVTCNYVARAKGVTKLMLIAEAQ 72
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANL 545
++CP+L LVNGEDL YR S ++F +L + VEKLG DENF+DVT+LVE L+ A++
Sbjct: 73 RICPDLVLVNGEDLAPYRQMSQRIFDLLLNYTPLVEKLGFDENFMDVTALVE--LRQAHV 130
Query: 546 NDLIV---MGQLY---SEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHN 707
+ ++ +G Y P + C CGC RL I ++IA E+R+++ LG T CAGIA+N
Sbjct: 131 AEALLRPPVGHTYPADGTPLSNCDCGCAQRLAIGTRIAQEIREELKLRLGITCCAGIAYN 190
Query: 708 K 710
K
Sbjct: 191 K 191
>AE014297-704|AAF54198.1| 737|Drosophila melanogaster CG7602-PA,
isoform A protein.
Length = 737
Score = 180 bits (439), Expect = 1e-45
Identities = 93/181 (51%), Positives = 126/181 (69%), Gaps = 6/181 (3%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
H ++IIH+D+D FYAQVE +R+P LR LGIQQKNIVVT NY AR GV+K ML+ +A
Sbjct: 13 HQRTIIHLDMDYFYAQVEEIRDPTLRSKALGIQQKNIVVTCNYVARAKGVTKLMLIAEAQ 72
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANL 545
++CP+L LVNGEDL YR S ++F +L + VEKLG DENF+DVT+LVE L+ A++
Sbjct: 73 RICPDLVLVNGEDLAPYRQMSQRIFDLLLNYTPLVEKLGFDENFMDVTALVE--LRQAHV 130
Query: 546 NDLIV---MGQLY---SEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHN 707
+ ++ +G Y P + C CGC RL I ++IA E+R+++ LG T CAGIA+N
Sbjct: 131 AEALLRPPVGHTYPADGTPLSNCDCGCAQRLAIGTRIAQEIREELKLRLGITCCAGIAYN 190
Query: 708 K 710
K
Sbjct: 191 K 191
>AB049434-1|BAB15800.1| 737|Drosophila melanogaster dpol-iota
protein.
Length = 737
Score = 180 bits (439), Expect = 1e-45
Identities = 93/181 (51%), Positives = 126/181 (69%), Gaps = 6/181 (3%)
Frame = +3
Query: 186 HFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDAL 365
H ++IIH+D+D FYAQVE +R+P LR LGIQQKNIVVT NY AR GV+K ML+ +A
Sbjct: 13 HQRTIIHLDMDYFYAQVEEIRDPTLRSKALGIQQKNIVVTCNYVARAKGVTKLMLIAEAQ 72
Query: 366 KVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEKLGMDENFIDVTSLVEEKLKNANL 545
++CP+L LVNGEDL YR S ++F +L + VEKLG DENF+DVT+LVE L+ A++
Sbjct: 73 RICPDLVLVNGEDLAPYRQMSQRIFDLLLNYTPLVEKLGFDENFMDVTALVE--LRQAHV 130
Query: 546 NDLIV---MGQLY---SEPSAECPCGCHNRLKIASQIANEMRKKIYDELGYTTCAGIAHN 707
+ ++ +G Y P + C CGC RL I ++IA E+R+++ LG T CAGIA+N
Sbjct: 131 AEALLRPPVGHTYPADGTPLSNCDCGCAQRLAIGTRIAQEIREELKLRLGITCCAGIAYN 190
Query: 708 K 710
K
Sbjct: 191 K 191
>AY058771-1|AAL14000.1| 885|Drosophila melanogaster SD05329p
protein.
Length = 885
Score = 68.5 bits (160), Expect = 8e-12
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Frame = +3
Query: 150 SSCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNY 314
SS + + ++ + ++ +D+DCF+ QVE ++PE R+ PL + Q N ++ NY
Sbjct: 2 SSARSHVSMQNKYDRVVLLVDMDCFFCQVEEKQHPEYRNRPLAVVQYNPWRGGGIIAVNY 61
Query: 315 EARNYGVSKCMLVTDALKVCPNLKLV------NGEDLHSYRTASGKVFLVLQGWRCPVEK 476
AR GV++ M +A +CP + L D YR A +V VLQ + +E+
Sbjct: 62 AARAKGVTRHMRGDEAKDLCPEIVLCQVPNIREKADTSKYRDAGKEVANVLQRFTQLLER 121
Query: 477 LGMDENFIDVTSLVEEKLK 533
+DE ++D+T V +++
Sbjct: 122 ASVDEAYLDITETVNHRMQ 140
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 615 RLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
RL I + +A E+R + E GY AGIAHNK
Sbjct: 204 RLLIGASVAGEVRAAVKKETGYECSAGIAHNK 235
>AE014296-3638|AAF51794.1| 885|Drosophila melanogaster CG7143-PA
protein.
Length = 885
Score = 68.5 bits (160), Expect = 8e-12
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Frame = +3
Query: 150 SSCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNY 314
SS + + ++ + ++ +D+DCF+ QVE ++PE R+ PL + Q N ++ NY
Sbjct: 2 SSARSHVSMQNKYDRVVLLVDMDCFFCQVEEKQHPEYRNRPLAVVQYNPWRGGGIIAVNY 61
Query: 315 EARNYGVSKCMLVTDALKVCPNLKLV------NGEDLHSYRTASGKVFLVLQGWRCPVEK 476
AR GV++ M +A +CP + L D YR A +V VLQ + +E+
Sbjct: 62 AARAKGVTRHMRGDEAKDLCPEIVLCQVPNIREKADTSKYRDAGKEVANVLQRFTQLLER 121
Query: 477 LGMDENFIDVTSLVEEKLK 533
+DE ++D+T V +++
Sbjct: 122 ASVDEAYLDITETVNHRMQ 140
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 615 RLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
RL I + +A E+R + E GY AGIAHNK
Sbjct: 204 RLLIGASVAGEVRAAVKKETGYECSAGIAHNK 235
>AB049433-1|BAB15799.1| 885|Drosophila melanogaster dpol-eta
protein.
Length = 885
Score = 68.5 bits (160), Expect = 8e-12
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Frame = +3
Query: 150 SSCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNY 314
SS + + ++ + ++ +D+DCF+ QVE ++PE R+ PL + Q N ++ NY
Sbjct: 2 SSARSHVSMQNKYDRVVLLVDMDCFFCQVEEKQHPEYRNRPLAVVQYNPWRGGGIIAVNY 61
Query: 315 EARNYGVSKCMLVTDALKVCPNLKLV------NGEDLHSYRTASGKVFLVLQGWRCPVEK 476
AR GV++ M +A +CP + L D YR A +V VLQ + +E+
Sbjct: 62 AARAKGVTRHMRGDEAKDLCPEIVLCQVPNIREKADTSKYRDAGKEVANVLQRFTQLLER 121
Query: 477 LGMDENFIDVTSLVEEKLK 533
+DE ++D+T V +++
Sbjct: 122 ASVDEAYLDITETVNHRMQ 140
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 615 RLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
RL I + +A E+R + E GY AGIAHNK
Sbjct: 204 RLLIGASVAGEVRAAVKKETGYECSAGIAHNK 235
>AB036766-1|BAB20905.1| 885|Drosophila melanogaster DNA polymerase
eta protein.
Length = 885
Score = 68.5 bits (160), Expect = 8e-12
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Frame = +3
Query: 150 SSCSTCNEIDGEHFKSIIHIDLDCFYAQVEMVRNPELRDVPLGIQQKNI-----VVTSNY 314
SS + + ++ + ++ +D+DCF+ QVE ++PE R+ PL + Q N ++ NY
Sbjct: 2 SSARSHVSMQNKYDRVVLLVDMDCFFCQVEEKQHPEYRNRPLAVVQYNPWRGGGIIAVNY 61
Query: 315 EARNYGVSKCMLVTDALKVCPNLKLV------NGEDLHSYRTASGKVFLVLQGWRCPVEK 476
AR GV++ M +A +CP + L D YR A +V VLQ + +E+
Sbjct: 62 AARAKGVTRHMRGDEAKDLCPEIVLCQVPNIREKADTSKYRDAGKEVANVLQRFTQLLER 121
Query: 477 LGMDENFIDVTSLVEEKLK 533
+DE ++D+T V +++
Sbjct: 122 ASVDEAYLDITETVNHRMQ 140
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 615 RLKIASQIANEMRKKIYDELGYTTCAGIAHNK 710
RL I + +A E+R + E GY AGIAHNK
Sbjct: 204 RLLIGASVAGEVRAAVKKETGYECSAGIAHNK 235
>AE014296-120|AAF47401.1| 995|Drosophila melanogaster CG12189-PA
protein.
Length = 995
Score = 51.6 bits (118), Expect = 1e-06
Identities = 29/119 (24%), Positives = 53/119 (44%)
Frame = +3
Query: 297 VVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEK 476
+ + +YEAR G+ M V ALK+CP LK + D Y+ + ++ + + +E
Sbjct: 359 IASCSYEAREKGIRNGMFVGQALKLCPELKTI-PYDFEGYKEVAFTLYDTVAQYTLNIEA 417
Query: 477 LGMDENFIDVTSLVEEKLKNANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMR 653
+ DE F+++T L E + + ++YS+ C G +A E +
Sbjct: 418 VSCDEMFVELTDLAHELNVDVMAFVSHLRQEVYSKTGCPCSAGVAGNKLLARMATKEAK 476
Score = 36.7 bits (81), Expect = 0.031
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI 281
++HID+DCF+ V + PELR +P+ +
Sbjct: 275 VMHIDMDCFFVSVGLRTRPELRGLPIAV 302
>AB049435-1|BAB15801.1| 995|Drosophila melanogaster dREV1 protein.
Length = 995
Score = 51.6 bits (118), Expect = 1e-06
Identities = 29/119 (24%), Positives = 53/119 (44%)
Frame = +3
Query: 297 VVTSNYEARNYGVSKCMLVTDALKVCPNLKLVNGEDLHSYRTASGKVFLVLQGWRCPVEK 476
+ + +YEAR G+ M V ALK+CP LK + D Y+ + ++ + + +E
Sbjct: 359 IASCSYEAREKGIRNGMFVGQALKLCPELKTI-PYDFEGYKEVAFTLYDTVAQYTLNIEA 417
Query: 477 LGMDENFIDVTSLVEEKLKNANLNDLIVMGQLYSEPSAECPCGCHNRLKIASQIANEMR 653
+ DE F+++T L E + + ++YS+ C G +A E +
Sbjct: 418 VSCDEMFVELTDLAHELNVDVMAFVSHLRQEVYSKTGCPCSAGVAGNKLLARMATKEAK 476
Score = 36.7 bits (81), Expect = 0.031
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 198 IIHIDLDCFYAQVEMVRNPELRDVPLGI 281
++HID+DCF+ V + PELR +P+ +
Sbjct: 275 VMHIDMDCFFVSVGLRTRPELRGLPIAV 302
>AY051778-1|AAK93202.1| 354|Drosophila melanogaster LD30318p
protein.
Length = 354
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +3
Query: 201 IHIDLDCFYAQ--VEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDAL-KV 371
+++ L+ Y+ VE+VRN + G ++ N RN G + ++ +
Sbjct: 137 LYVSLEELYSGNFVEIVRNKPVTKPASGTRKCNC--RQEMVTRNLGPGRFQMIQQTVCDE 194
Query: 372 CPNLKLVNGEDLHSYRTASGKV 437
CPN+KLVN E G V
Sbjct: 195 CPNVKLVNEERTLEIEVEQGMV 216
>AE014134-109|AAF51493.1| 354|Drosophila melanogaster CG4164-PA
protein.
Length = 354
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +3
Query: 201 IHIDLDCFYAQ--VEMVRNPELRDVPLGIQQKNIVVTSNYEARNYGVSKCMLVTDAL-KV 371
+++ L+ Y+ VE+VRN + G ++ N RN G + ++ +
Sbjct: 137 LYVSLEELYSGNFVEIVRNKPVTKPASGTRKCNC--RQEMVTRNLGPGRFQMIQQTVCDE 194
Query: 372 CPNLKLVNGEDLHSYRTASGKV 437
CPN+KLVN E G V
Sbjct: 195 CPNVKLVNEERTLEIEVEQGMV 216
>AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p
protein.
Length = 1071
Score = 28.7 bits (61), Expect = 8.2
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 450 QGWRC-PVEKLGMDEN-FIDVTSLVEEKLKNANLNDLIVMGQLYSEPSAECPCGCHNRLK 623
QG+ C P LG D F+ S V +L +NL+ + +GQ C CG RL+
Sbjct: 607 QGYSCIPGCNLGQDSKLFVPFGSYV--RLGKSNLHKKLEVGQFPLAEHIVCSCGLQGRLE 664
Query: 624 IASQIANEM 650
+ + M
Sbjct: 665 QCQPLPSYM 673
>AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA
protein.
Length = 1071
Score = 28.7 bits (61), Expect = 8.2
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 450 QGWRC-PVEKLGMDEN-FIDVTSLVEEKLKNANLNDLIVMGQLYSEPSAECPCGCHNRLK 623
QG+ C P LG D F+ S V +L +NL+ + +GQ C CG RL+
Sbjct: 607 QGYSCIPGCNLGQDSKLFVPFGSYV--RLGKSNLHKKLEVGQFPLAEHIVCSCGLQGRLE 664
Query: 624 IASQIANEM 650
+ + M
Sbjct: 665 QCQPLPSYM 673
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,431,197
Number of Sequences: 53049
Number of extensions: 652083
Number of successful extensions: 2013
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2001
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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