Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0078
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   1.3  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    24   1.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    24   1.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.1  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   5.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.1  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.7  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 286 RHHIRVINRHAHYFSNSIRFQ 224
           RHH  V + H H+F +  ++Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 286 RHHIRVINRHAHYFSNSIRFQ 224
           RHH  V + H H+F +  ++Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 286 RHHIRVINRHAHYFSNSIRFQ 224
           RHH  V + H H+F +  ++Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 290  KPPSHTGH*QTRT 252
            +PPS T H QT+T
Sbjct: 1175 RPPSTTNHWQTKT 1187


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 145 YNLLSRRQLTNIHLISGRIFE*ISSRQLIPD 53
           YN   +RQ  +I L SGR      S  L+ D
Sbjct: 157 YNPSQKRQFLHITLASGRTLTVTPSHLLVLD 187


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 53   VGDQLPAADLFEDSPANK 106
            V   +PA D+FE+   NK
Sbjct: 1510 VASSIPAKDVFENGHVNK 1527


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 53   VGDQLPAADLFEDSPANK 106
            V   +PA D+FE+   NK
Sbjct: 1510 VASSIPAKDVFENGHVNK 1527


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 53   VGDQLPAADLFEDSPANK 106
            V   +PA D+FE+   NK
Sbjct: 1510 VASSIPAKDVFENGHVNK 1527


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 53   VGDQLPAADLFEDSPANK 106
            V   +PA D+FE+   NK
Sbjct: 1510 VASSIPAKDVFENGHVNK 1527


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 161 GAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVND 271
           G F  G   T   GY  +  K K  G   IV +S++D
Sbjct: 383 GGFWVGYEDTDTAGYKASYVKAKGLGGIAIVDLSLDD 419


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,391
Number of Sequences: 336
Number of extensions: 3777
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)