Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0077
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.4  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 583 FVCAKVQYSFCHKLNLLGTNRNLIN 657
           F+   ++  +CH LN+L     L+N
Sbjct: 189 FINLLMELQYCHYLNILRVRYQLLN 213


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 583 FVCAKVQYSFCHKLNLLGTNRNLIN 657
           F+   ++  +CH LN+L     L+N
Sbjct: 189 FINLLMELQYCHYLNILRVRYQLLN 213


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 315 NKKVQNALRKSMGVW 271
           N   QNA RK  GVW
Sbjct: 218 NSLYQNATRKVCGVW 232


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 561 VMTTCLCICVCQSSVQLLSQIELIRHQQK 647
           V  TCL +   +S VQLL+ +  I +  K
Sbjct: 238 VFGTCLILITGKSIVQLLTCLNFITNNLK 266


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 561 VMTTCLCICVCQSSVQLLSQIELIRHQQK 647
           V  TCL +   +S VQLL+ +  I +  K
Sbjct: 238 VFGTCLILITGKSIVQLLTCLNFITNNLK 266


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +2

Query: 380 YKISLLSFNIVLLYYLWIIKKVGTLV*VDMYFYEVLYHLH 499
           Y + ++   I   YY +I+  V  L+ V +Y++   Y++H
Sbjct: 229 YCVLIILLCIYYFYYAFILFTVHLLLLVCIYYF---YYMH 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,560
Number of Sequences: 336
Number of extensions: 3832
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)