Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0077
         (708 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034607-1|AAH34607.1| 1142|Homo sapiens ASPM protein protein.         30   9.3  
AY971956-1|AAY46814.1| 1892|Homo sapiens abnormal spindle-like m...    30   9.3  
AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like m...    30   9.3  
AY099893-1|AAM44122.1|  825|Homo sapiens abnormal spindle protei...    30   9.3  
AY099891-1|AAM44120.1|  826|Homo sapiens abnormal spindle protei...    30   9.3  
AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle) ...    30   9.3  
AL353809-3|CAH72550.1| 1142|Homo sapiens asp (abnormal spindle) ...    30   9.3  
AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein.    30   9.3  

>BC034607-1|AAH34607.1| 1142|Homo sapiens ASPM protein protein.
          Length = 1142

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 398 LVMIFCTFDCLRMDRLFEIPRRQSVFCKIKKFRMLSENLWEFGMDFLT 255
           L+++ C  D  ++ RL  I     +FCK  +F+   E L  F  DFL+
Sbjct: 140 LLLLVCFLDYAKISRL--IDHDPCLFCKDAEFKASKEILLAFSRDFLS 185


>AY971956-1|AAY46814.1| 1892|Homo sapiens abnormal spindle-like
            microcephaly associated splice variant 1 protein.
          Length = 1892

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 398  LVMIFCTFDCLRMDRLFEIPRRQSVFCKIKKFRMLSENLWEFGMDFLT 255
            L+++ C  D  ++ RL  I     +FCK  +F+   E L  F  DFL+
Sbjct: 890  LLLLVCFLDYAKISRL--IDHDPCLFCKDAEFKASKEILLAFSRDFLS 935


>AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like
            microcephaly-associated protein protein.
          Length = 3477

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 398  LVMIFCTFDCLRMDRLFEIPRRQSVFCKIKKFRMLSENLWEFGMDFLT 255
            L+++ C  D  ++ RL  I     +FCK  +F+   E L  F  DFL+
Sbjct: 890  LLLLVCFLDYAKISRL--IDHDPCLFCKDAEFKASKEILLAFSRDFLS 935


>AY099893-1|AAM44122.1|  825|Homo sapiens abnormal spindle protein
           ASP protein.
          Length = 825

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 398 LVMIFCTFDCLRMDRLFEIPRRQSVFCKIKKFRMLSENLWEFGMDFLT 255
           L+++ C  D  ++ RL  I     +FCK  +F+   E L  F  DFL+
Sbjct: 484 LLLLVCFLDYAKISRL--IDHDPCLFCKDAEFKASKEILLAFSRDFLS 529


>AY099891-1|AAM44120.1|  826|Homo sapiens abnormal spindle protein
           ASP protein.
          Length = 826

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 398 LVMIFCTFDCLRMDRLFEIPRRQSVFCKIKKFRMLSENLWEFGMDFLT 255
           L+++ C  D  ++ RL  I     +FCK  +F+   E L  F  DFL+
Sbjct: 484 LLLLVCFLDYAKISRL--IDHDPCLFCKDAEFKASKEILLAFSRDFLS 529


>AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle)
            homolog, microcephaly associated (Drosophila) protein.
          Length = 3477

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 398  LVMIFCTFDCLRMDRLFEIPRRQSVFCKIKKFRMLSENLWEFGMDFLT 255
            L+++ C  D  ++ RL  I     +FCK  +F+   E L  F  DFL+
Sbjct: 890  LLLLVCFLDYAKISRL--IDHDPCLFCKDAEFKASKEILLAFSRDFLS 935


>AL353809-3|CAH72550.1| 1142|Homo sapiens asp (abnormal spindle)
           homolog, microcephaly associated (Drosophila) protein.
          Length = 1142

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 398 LVMIFCTFDCLRMDRLFEIPRRQSVFCKIKKFRMLSENLWEFGMDFLT 255
           L+++ C  D  ++ RL  I     +FCK  +F+   E L  F  DFL+
Sbjct: 140 LLLLVCFLDYAKISRL--IDHDPCLFCKDAEFKASKEILLAFSRDFLS 185


>AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein.
          Length = 3477

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 398  LVMIFCTFDCLRMDRLFEIPRRQSVFCKIKKFRMLSENLWEFGMDFLT 255
            L+++ C  D  ++ RL  I     +FCK  +F+   E L  F  DFL+
Sbjct: 890  LLLLVCFLDYAKISRL--IDHDPCLFCKDAEFKASKEILLAFSRDFLS 935


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,326,060
Number of Sequences: 237096
Number of extensions: 2060520
Number of successful extensions: 3092
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3068
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)