Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0073
         (592 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130398-1|AAI30399.1|  912|Homo sapiens USP29 protein protein.        31   2.3  
BC130394-1|AAI30395.1|  912|Homo sapiens USP29 protein protein.        31   2.3  
AF229438-1|AAG10401.1|  922|Homo sapiens ubiquitin-specific proc...    31   2.3  

>BC130398-1|AAI30399.1|  912|Homo sapiens USP29 protein protein.
          Length = 912

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 21/95 (22%), Positives = 43/95 (45%)
 Frame = -1

Query: 442  AESTIGSESRSTETIRRATQWAVSMSLVIYV*SWVAASHSNMHGVWSRLSSKQKTW*TYM 263
            AE+T G     T  ++      +    +I V S + +S ++ H +      +++ W TY 
Sbjct: 800  AENTRGEAKELTRNVKMGDP--LQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYN 857

Query: 262  KIGFNSVPRNKLQ*QNLRRQFIFWFRYIGPFVYLI 158
             +  + +   K+Q   L   +IF++ + G F  L+
Sbjct: 858  DLCVSEISETKMQEARLHSGYIFFYMHNGIFEELL 892


>BC130394-1|AAI30395.1|  912|Homo sapiens USP29 protein protein.
          Length = 912

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 21/95 (22%), Positives = 43/95 (45%)
 Frame = -1

Query: 442  AESTIGSESRSTETIRRATQWAVSMSLVIYV*SWVAASHSNMHGVWSRLSSKQKTW*TYM 263
            AE+T G     T  ++      +    +I V S + +S ++ H +      +++ W TY 
Sbjct: 800  AENTRGEAKELTRNVKMGDP--LQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYN 857

Query: 262  KIGFNSVPRNKLQ*QNLRRQFIFWFRYIGPFVYLI 158
             +  + +   K+Q   L   +IF++ + G F  L+
Sbjct: 858  DLCVSEISETKMQEARLHSGYIFFYMHNGIFEELL 892


>AF229438-1|AAG10401.1|  922|Homo sapiens ubiquitin-specific
            processing protease protein.
          Length = 922

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 21/95 (22%), Positives = 43/95 (45%)
 Frame = -1

Query: 442  AESTIGSESRSTETIRRATQWAVSMSLVIYV*SWVAASHSNMHGVWSRLSSKQKTW*TYM 263
            AE+T G     T  ++      +    +I V S + +S ++ H +      +++ W TY 
Sbjct: 800  AENTRGEAKELTRNVKMGDP--LQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYN 857

Query: 262  KIGFNSVPRNKLQ*QNLRRQFIFWFRYIGPFVYLI 158
             +  + +   K+Q   L   +IF++ + G F  L+
Sbjct: 858  DLCVSEISETKMQEARLHSGYIFFYMHNGIFEELL 892


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,817,254
Number of Sequences: 237096
Number of extensions: 1542212
Number of successful extensions: 2577
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2577
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)