Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0070
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   2.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.1  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = +1

Query: 172 VKKTNKTFTI--ALKLIFDMGIINSSK-TSIHRNDRRRNVFQLIFHQSNNKKKKKPSFYN 342
           V   N  F +  A+ +I    I N  + +S+++N      FQ I  + NN+  K   FY 
Sbjct: 19  VSFVNSIFLVMSAVTIILSSLIFNQEQWSSLNKN------FQFIDKKLNNRNSKSRVFYE 72

Query: 343 DMTLKVG 363
           ++  + G
Sbjct: 73  NVNFQFG 79


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 427 HYRQHSFQIQIDTSQRYIVSYS 362
           HYR +   + ID +  YI+  S
Sbjct: 148 HYRLYQLSVLIDNNMSYIIIVS 169


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 331 TVFFFFYYCFDEISI 287
           T+ F F YC+  ISI
Sbjct: 548 TIVFAFCYCYYSISI 562


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 161 PRLRSQF*DYQIK*QNKRNHRNLC 90
           PR+  +     +K +N+RN  N C
Sbjct: 177 PRITKKANSVSVKVENRRNSPNSC 200


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 148 LRSRGTYFVKKTNKTFTIALKLIFDMG 228
           L+  G  FV     T+TI L LIF  G
Sbjct: 232 LQILGILFVGVIYTTYTIFLLLIFGSG 258


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 161 PRLRSQF*DYQIK*QNKRNHRNLC 90
           PR+  +     +K +N+RN  N C
Sbjct: 125 PRITKKANSVSVKVENRRNSPNSC 148


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 161 PRLRSQF*DYQIK*QNKRNHRNLC 90
           PR+  +     +K +N+RN  N C
Sbjct: 308 PRITKKANSVSVKVENRRNSPNSC 331


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,396
Number of Sequences: 336
Number of extensions: 2997
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)