Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0066
(585 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29488-12|AAA68769.3| 617|Caenorhabditis elegans Hypothetical p... 41 7e-04
U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like pr... 31 0.80
U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like pr... 31 0.80
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr... 31 0.80
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 28 5.6
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 28 5.6
AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical ... 28 5.6
AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical ... 28 5.6
AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical ... 28 5.6
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 28 5.6
Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z77131-3|CAB00855.1| 156|Caenorhabditis elegans Hypothetical pr... 27 7.4
U97010-2|AAB52319.1| 198|Caenorhabditis elegans Hypothetical pr... 27 7.4
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 27 7.4
Z70781-1|CAA94835.1| 358|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U29488-12|AAA68769.3| 617|Caenorhabditis elegans Hypothetical
protein C56C10.1 protein.
Length = 617
Score = 40.7 bits (91), Expect = 7e-04
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 16/207 (7%)
Frame = +2
Query: 2 GGHEGGLLKEIFSINCGFLDLNVKDTK-VMKGKLNF---------DSEQSNESKSTAMPL 151
G GLL E F+I+CG L V K V G L+F D E +++ + L
Sbjct: 235 GASYEGLLHEFFTIDCGKLAFPVDLRKQVQTGPLDFDWIEINPEEDKEAHQQNRGDTVKL 294
Query: 152 DSSIDSLYAEI*HRHFXXXXXXXXXXXXXXXNEDIKALGIQEM---KHFVATKLQQVTLF 322
D+ D ++A I ++H K+ I ++ ++FV L+ +
Sbjct: 295 DNCED-IFASIRNKHVTAALEFLHSKAKSIQKSIEKSSMIDDVADYRNFVEKDLRALKKD 353
Query: 323 KQNLVNHVLACETIIS--EMSNRFENLKLTETEMLNNRNKKTNYNFLDENFGTEIHIYNS 496
++ H+ ACE +++ +M + KL +L + ++F+ E
Sbjct: 354 HKHCELHINACEMMMNKVKMEDYRTMFKLEHEMLLGTVTHEEYFDFVFERVPMRSCRDVV 413
Query: 497 LRLMCLLSL-TQGLSYDEYNTLVNKYL 574
L +M L SL G+ D YN V YL
Sbjct: 414 LSMMSLASLKLDGVPDDTYNEFVEMYL 440
>U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform c protein.
Length = 1576
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +2
Query: 245 NEDIKALGIQEMKHFVATKLQQVTLFK------QNLVNHVLACETIISEMSNRFENLKLT 406
NED A I+E++ V T Q+T K + L + E ++++M+ +E +L
Sbjct: 388 NEDPNARVIRELREEVETLRMQITQTKKEHAETEELRERLAESERLVAQMNKSWEE-RLK 446
Query: 407 ETEMLNNRNKK 439
ET+ LN +K
Sbjct: 447 ETDTLNKERQK 457
>U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform b protein.
Length = 1610
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +2
Query: 245 NEDIKALGIQEMKHFVATKLQQVTLFK------QNLVNHVLACETIISEMSNRFENLKLT 406
NED A I+E++ V T Q+T K + L + E ++++M+ +E +L
Sbjct: 388 NEDPNARVIRELREEVETLRMQITQTKKEHAETEELRERLAESERLVAQMNKSWEE-RLK 446
Query: 407 ETEMLNNRNKK 439
ET+ LN +K
Sbjct: 447 ETDTLNKERQK 457
>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform a protein.
Length = 1595
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +2
Query: 245 NEDIKALGIQEMKHFVATKLQQVTLFK------QNLVNHVLACETIISEMSNRFENLKLT 406
NED A I+E++ V T Q+T K + L + E ++++M+ +E +L
Sbjct: 388 NEDPNARVIRELREEVETLRMQITQTKKEHAETEELRERLAESERLVAQMNKSWEE-RLK 446
Query: 407 ETEMLNNRNKK 439
ET+ LN +K
Sbjct: 447 ETDTLNKERQK 457
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defective
protein 19,isoform a protein.
Length = 1783
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -2
Query: 518 LTNTSDANYYKCEFQSRSFHQGSYNWSFCFYYSTFQSQLILDSQICCSFLILS 360
+ + SD +C+ S +H+G N S C + F + + CSFL+++
Sbjct: 1308 MLSCSDREDVRCDPMSDDYHKGGLNESRC--GNNFAYPYFISFFMLCSFLVIN 1358
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defective
protein 19,isoform b protein.
Length = 1877
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -2
Query: 518 LTNTSDANYYKCEFQSRSFHQGSYNWSFCFYYSTFQSQLILDSQICCSFLILS 360
+ + SD +C+ S +H+G N S C + F + + CSFL+++
Sbjct: 1308 MLSCSDREDVRCDPMSDDYHKGGLNESRC--GNNFAYPYFISFFMLCSFLVIN 1358
>AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical
protein ZK1025.4b protein.
Length = 452
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 431 FYYSTFQSQLILDSQICCSFLILSFHKL 348
+ Y FQ+Q +L +QI SF I +HK+
Sbjct: 18 YVYPRFQNQSLLKNQINASFPITFYHKV 45
>AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical
protein ZK1025.4a protein.
Length = 402
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 431 FYYSTFQSQLILDSQICCSFLILSFHKL 348
+ Y FQ+Q +L +QI SF I +HK+
Sbjct: 18 YVYPRFQNQSLLKNQINASFPITFYHKV 45
>AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical
protein T11F1.8 protein.
Length = 888
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +2
Query: 362 IISEMSNRFENLKLTETEMLNNRNKKTNYNFLDENFGTEIHI 487
++S ++ + + L + ML N NK+ NY +++N GT+I +
Sbjct: 831 LMSVIAESKKEVVLRDNSMLINGNKQCNYK-INDNTGTDIKV 871
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -2
Query: 518 LTNTSDANYYKCEFQSRSFHQGSYNWSFCFYYSTFQSQLILDSQICCSFLILS 360
+ + SD +C+ S +H+G N S C + F + + CSFL+++
Sbjct: 1308 MLSCSDREDVRCDPMSDDYHKGGLNESRC--GNNFAYPYFISFFMLCSFLVIN 1358
>Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical
protein F25H2.6 protein.
Length = 573
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/94 (20%), Positives = 43/94 (45%)
Frame = +2
Query: 245 NEDIKALGIQEMKHFVATKLQQVTLFKQNLVNHVLACETIISEMSNRFENLKLTETEMLN 424
NE ++G + + A Q L+ +++V + ++ S S + + + + +L
Sbjct: 67 NEFSISMGENVVWYLKAENSQSKLLWMRSVVRETVQNDSDYSSTSTKSHSRNPSVSSVLA 126
Query: 425 NRNKKTNYNFLDENFGTEIHIYNSLRLMCLLSLT 526
N+K++ N + F T++ + R MC +T
Sbjct: 127 TNNQKSDDNESTKLFATKLSELEAYRTMCKDQMT 160
>Z77131-3|CAB00855.1| 156|Caenorhabditis elegans Hypothetical
protein C54C6.4 protein.
Length = 156
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 97 LAFHYFCIFNIQIQKSTVYTEYF 29
L+ HYFC+ NI++ S VY +F
Sbjct: 101 LSLHYFCMSNIRMTFSFVYFCFF 123
>U97010-2|AAB52319.1| 198|Caenorhabditis elegans Hypothetical
protein W08A12.3 protein.
Length = 198
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 392 NLKLTETEMLNNRNKKTNYNFLDENFGTEIH 484
N T EML++R KK N L E++ EIH
Sbjct: 30 NCVSTCCEMLSHRRKKRNVEKLPEDYVDEIH 60
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Frame = +2
Query: 296 TKLQQVTLFKQNLVNHVLACETIISEMSNRFENLKLTE-----TEMLNNRNKKTNYNFLD 460
T+ + T+ K+N+ + CE + + R + +K E E+LN+ +L
Sbjct: 109 TRQLEATMLKRNMASDAQRCEELFESLEKRSDLVKKAEITSEIKEILNDNKNLRKIGWLK 168
Query: 461 ENFGTEIHI-YNSLRLMCLLSLTQGLS 538
T++ + N +R L +GL+
Sbjct: 169 NMVDTKLKVAENEVRRSGAEELKRGLA 195
>Z70781-1|CAA94835.1| 358|Caenorhabditis elegans Hypothetical
protein F57A8.3 protein.
Length = 358
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 331 ILLEESHLLEFGRNKVLHFLYT*CFYVFVF 242
+L+E+ EFG K +FL CFY F+F
Sbjct: 30 VLIEKKSRKEFGGYK--NFLRVYCFYAFIF 57
>Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical
protein B0284.1 protein.
Length = 431
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/42 (23%), Positives = 24/42 (57%)
Frame = +2
Query: 326 QNLVNHVLACETIISEMSNRFENLKLTETEMLNNRNKKTNYN 451
+N+V H+ +C+T + + + NLK + + ++++ N N
Sbjct: 271 KNVVKHINSCKTSLRRIKEKLNNLKYS-ARTIRDQDESENVN 311
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,341,879
Number of Sequences: 27780
Number of extensions: 206026
Number of successful extensions: 787
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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