Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0066
(585 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 26 0.24
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 26 0.24
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 26 0.24
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 26 0.24
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 26 0.24
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 26 0.24
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 26 0.24
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 26 0.24
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 26 0.24
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 26 0.24
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 25 0.72
DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse tr... 22 3.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 3.9
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 5.1
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 6.7
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 6.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 6.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.9
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.24
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 356 ETIISEMSNRFENLKLTETEMLNNRNK-KTNYNFLDENFGTEIHIYNSL 499
ET NR E + E ++++N N NYN+ + H YN L
Sbjct: 61 ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKL 109
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.24
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 356 ETIISEMSNRFENLKLTETEMLNNRNK-KTNYNFLDENFGTEIHIYNSL 499
ET NR E + E ++++N N NYN+ + H YN L
Sbjct: 61 ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKL 109
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.24
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 356 ETIISEMSNRFENLKLTETEMLNNRNK-KTNYNFLDENFGTEIHIYNSL 499
ET NR E + E ++++N N NYN+ + H YN L
Sbjct: 61 ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKL 109
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.24
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 356 ETIISEMSNRFENLKLTETEMLNNRNK-KTNYNFLDENFGTEIHIYNSL 499
ET NR E + E ++++N N NYN+ + H YN L
Sbjct: 61 ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKL 109
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.24
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 356 ETIISEMSNRFENLKLTETEMLNNRNK-KTNYNFLDENFGTEIHIYNSL 499
ET NR E + E ++++N N NYN+ + H YN L
Sbjct: 61 ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKL 109
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.24
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 356 ETIISEMSNRFENLKLTETEMLNNRNK-KTNYNFLDENFGTEIHIYNSL 499
ET NR E + E ++++N N NYN+ + H YN L
Sbjct: 61 ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKL 109
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.24
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 356 ETIISEMSNRFENLKLTETEMLNNRNK-KTNYNFLDENFGTEIHIYNSL 499
ET NR E + E ++++N N NYN+ + H YN L
Sbjct: 61 ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKL 109
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.24
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 356 ETIISEMSNRFENLKLTETEMLNNRNK-KTNYNFLDENFGTEIHIYNSL 499
ET NR E + E ++++N N NYN+ + H YN L
Sbjct: 61 ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKL 109
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 26.2 bits (55), Expect = 0.24
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 356 ETIISEMSNRFENLKLTETEMLNNRNK-KTNYNFLDENFGTEIHIYNSL 499
ET NR E + E ++++N N NYN+ + H YN L
Sbjct: 294 ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKL 342
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 26.2 bits (55), Expect = 0.24
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 356 ETIISEMSNRFENLKLTETEMLNNRNK-KTNYNFLDENFGTEIHIYNSL 499
ET NR E + E ++++N N NYN+ + H YN L
Sbjct: 294 ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKL 342
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.72
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 356 ETIISEMSNRFENLKLTETEMLNNRNK-KTNYNFLDENFGTEIHIYNS 496
ET NR E + E ++++N N NYN+ + N+ + YN+
Sbjct: 61 ETSKERSRNRTERERSKEPKIISNNNSLSNNYNY-NNNYNNYNNNYNT 107
>DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse
transcriptase protein.
Length = 42
Score = 22.2 bits (45), Expect = 3.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 572 GIY*LMYCIHHK 537
G Y YC+HHK
Sbjct: 15 GTYFQQYCLHHK 26
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 536 TNLVLSLTNTSDANYYKC 483
++L +S T+T+D YKC
Sbjct: 454 SHLNISSTHTNDGGLYKC 471
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 5.1
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 362 IISEMSNRFENLKLTETEMLNNRNKKTNYNFLDENFGTEIHIYNSL 499
IIS +SN K N N NYN+ + N+ +Y ++
Sbjct: 81 IISSLSN-----KTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNI 121
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 362 IISEMSNRFENLKLTETEMLNNRNKKTNYN 451
IIS +SN ++ N N NYN
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNYNNNYN 110
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 362 IISEMSNRFENLKLTETEMLNNRNKKTNYN 451
IIS +SN ++ N N NYN
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNYNNNYN 110
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 528 CVKLNKHIRRKLL 490
C++ +HIRR+LL
Sbjct: 9 CIQERRHIRRELL 21
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 8.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 401 LTETEMLNNRNKKTNYNFLDENFGTEIHIYNS 496
L+ + NN N K NYN + N + YN+
Sbjct: 318 LSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNN 349
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,915
Number of Sequences: 438
Number of extensions: 2769
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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