Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0058
         (616 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    98   5e-21
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    78   6e-15
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    64   1e-10
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    50   1e-06
AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical ...    50   1e-06
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    44   9e-05
U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a...    39   0.002
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    34   0.070
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    30   1.1  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 97.9 bits (233), Expect = 5e-21
 Identities = 47/82 (57%), Positives = 60/82 (73%)
 Frame = +2

Query: 56  FDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAG 235
           FD AAA VK LK  P++ +LL LYA FKQ TVGD +  ++PG+ DLKGKAK+ AW +  G
Sbjct: 5   FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKG 63

Query: 236 TSKEDAQKAYIEIVEGLIASIG 301
            +K+DAQKAY+ +VE LIA  G
Sbjct: 64  LAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 77.8 bits (183), Expect = 6e-15
 Identities = 37/86 (43%), Positives = 55/86 (63%)
 Frame = +2

Query: 35  NMSLQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFD 214
           + S Q  F++A  N+K LK  P +   L LY  FKQAT GD     RPG++D  G+AK+D
Sbjct: 22  SFSAQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKRPGMMDFVGRAKYD 80

Query: 215 AWHKLAGTSKEDAQKAYIEIVEGLIA 292
           AW+ L G ++++A+  Y ++V GLI+
Sbjct: 81  AWNTLKGQTQDEARANYAKLVGGLIS 106


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
 Frame = +2

Query: 38  MSLQEKFDQAAANVKNL-KALP---TDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKA 205
           MSLQEKFD A   ++ L K  P   ++ Q L  Y+ FKQA++GD +  +RPG+  +  + 
Sbjct: 1   MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVN-TDRPGIFSIIERK 59

Query: 206 KFDAWHKLAGTSKEDAQKAYIEIVEGLIASI 298
           K+D+W +L G S+++A++ YI+ +  +   I
Sbjct: 60  KWDSWKELEGVSQDEAKERYIKALNDMFDKI 90


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 27/68 (39%), Positives = 42/68 (61%)
 Frame = +2

Query: 116 LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIAS 295
           LN YA FKQAT G  D   +P   D++G  K++AW+KL   + ++A++AY++ +   I  
Sbjct: 28  LNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIRE 86

Query: 296 IGLKE*KT 319
           +  KE KT
Sbjct: 87  V-QKEYKT 93


>AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical
           protein Y17G7B.1 protein.
          Length = 115

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
 Frame = +2

Query: 56  FDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDA--DPANRPGLLDLKGKAKFDAWHKL 229
           F+ AA  ++ LK+ PTD + L LYA +KQA  GD   +        D  G+ K+ AW   
Sbjct: 15  FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQ 74

Query: 230 AGTSKEDAQKAYIEIVEGLIASIG 301
            G + E  +  Y+ I E +I   G
Sbjct: 75  KGANSEKCRADYVAIAEEMIKKYG 98


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 44.0 bits (99), Expect = 9e-05
 Identities = 25/88 (28%), Positives = 39/88 (44%)
 Frame = +2

Query: 32  INMSLQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKF 211
           I+  L+ KFD A   +           +L  Y  +KQA  G AD    P   +   + KF
Sbjct: 24  IDTLLEAKFDAATTRLPGFLTKIDQKTILKFYGLYKQAVEGPADSKKGPYWFETVARKKF 83

Query: 212 DAWHKLAGTSKEDAQKAYIEIVEGLIAS 295
           ++W   +  S+  A +AY E++  L  S
Sbjct: 84  NSWLANSQMSRSRAMEAYCELMAQLDTS 111


>U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 4 protein.
          Length = 146

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
 Frame = +2

Query: 41  SLQEKFDQAAANVKNL-KALPTDAQL---LNLYAHFKQATVGDADPANRPGLLDLKGKAK 208
           SL E+F+ A   +  L K  P    +   L +Y+ +KQAT G  D   +P    ++ + K
Sbjct: 4   SLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTI-QPYFFQIEQRMK 62

Query: 209 FDAWHKLAGTSKEDAQKAYIE 271
           ++AW++L    + +A+  Y+E
Sbjct: 63  WNAWNQLGNMDEAEAKAQYVE 83


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 34.3 bits (75), Expect = 0.070
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +2

Query: 191 LKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 286
           + G  K+ AW+K  G +KE+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +2

Query: 116 LNLYAHFKQATVGD-ADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVE 280
           + L +  KQ   G+ +D  +  G LD+ G     AW +L   S+++A  +++ +V+
Sbjct: 51  IKLLSLSKQVQHGEISDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFVFLVD 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,390,654
Number of Sequences: 27780
Number of extensions: 259696
Number of successful extensions: 589
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)