Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0054
(658 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 134 5e-32
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 107 8e-24
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 9e-18
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 81 8e-16
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 81 1e-15
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 73 2e-13
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 66 2e-11
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 62 5e-10
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 58 8e-09
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 56 3e-08
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 55 4e-08
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 54 1e-07
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 51 1e-06
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 51 1e-06
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 50 2e-06
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 49 4e-06
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 46 2e-05
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 46 4e-05
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 45 5e-05
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 45 6e-05
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 44 8e-05
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 36 1e-04
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 44 1e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 43 2e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 42 6e-04
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 42 6e-04
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 42 6e-04
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 40 0.002
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 38 0.010
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 38 0.010
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 37 0.013
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 36 0.029
SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 35 0.067
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 34 0.089
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.089
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 34 0.12
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 33 0.15
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 33 0.20
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 33 0.20
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 32 0.36
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 32 0.36
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 31 1.1
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_38604| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 29 2.5
SB_8368| Best HMM Match : VWA (HMM E-Value=0) 29 2.5
SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05) 29 3.3
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 29 3.3
SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2) 29 3.3
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 29 4.4
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 29 4.4
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 29 4.4
SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19) 28 5.8
SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37) 28 5.8
SB_1422| Best HMM Match : Synaphin (HMM E-Value=7.3) 28 5.8
SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017) 28 5.8
SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5) 28 7.7
SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_34393| Best HMM Match : RVT_1 (HMM E-Value=2e-36) 28 7.7
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 28 7.7
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_1065| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 134 bits (325), Expect = 5e-32
Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 1/174 (0%)
Frame = +1
Query: 139 GDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 318
G S D N DD KLFVGGLS+ETT + L+++F YGE+ +++K D TGR RG
Sbjct: 12 GTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRG 71
Query: 319 FAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 498
FAF+ FK D + I K R KIFVGGL E SD++IR +F +
Sbjct: 72 FAFVQFKHQSEADAIDPKPAAPIG------KPPHLRVKKIFVGGLKPETSDEKIREYFGK 125
Query: 499 -FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 657
+ + E+E + + N+R+GFCF++F+SE V+ + +T I G +V+VKRA
Sbjct: 126 AYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKRA 179
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 107 bits (257), Expect = 8e-24
Identities = 54/175 (30%), Positives = 110/175 (62%), Gaps = 19/175 (10%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 366
RK+F+GGL+W TT++ L+D+F +G I + + +K D GRSRGF F+ +++ +S+++V+
Sbjct: 50 RKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRD---GRSRGFGFVTYESSDSVNEVL 106
Query: 367 AAGEHTINNKKVDPKK-----------AKARHGKIFVGGLSSEISDDEIRNFFSE----- 498
+H +++++++PK+ A ++ KIFVGGL+S +++I+ +F+
Sbjct: 107 KKKDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFNSLCRKN 166
Query: 499 -FGTILEVEMPFDKTKNQR-KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 657
G +++V++ D+ +R +GF F+TF+++++V + I K+ +VK+A
Sbjct: 167 GMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKA 221
Score = 58.0 bits (134), Expect = 6e-09
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHFGAY------GEIESINVKTD-PNTGRSRGFAFIVFKAPE 348
RK+FVGGL+ T +++++++F + GE+ +++K D N R RGFAF+ F E
Sbjct: 139 RKIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDE 198
Query: 349 SIDKVMAAGEHTINNKKVDPKKAK 420
++KV A H I K+ + KKA+
Sbjct: 199 IVEKVCAMKYHEIRMKQCEVKKAE 222
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 93.1 bits (221), Expect = 2e-19
Identities = 58/180 (32%), Positives = 103/180 (57%), Gaps = 21/180 (11%)
Frame = +1
Query: 181 DDDR--KLFVGGLSWETTDKELRDHF-----GAYGEIESINVKTDPNTGRSRGFAFIVFK 339
DD + KLFVGGL+ +TT++ +R +F G+ ++ S+++ P G+SR F F+ F
Sbjct: 3 DDSKLMKLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPE-GKSRKFCFVEFS 61
Query: 340 -APESIDKVMAAGE-HTINNKKVDPKKAKARHG----------KIFVGGLSSEISDDEIR 483
+ ID ++ E H+I+NK+V+ K+A R K+F+GGL E S+++++
Sbjct: 62 NGSDIIDNIVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGLKDEHSEEDVK 121
Query: 484 NFFSEFGTI--LEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 657
+ LE++M D+ N+ KG+CF+ F +E +V+ L + GK+V++K+A
Sbjct: 122 TALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKA 181
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 87.4 bits (207), Expect = 9e-18
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 18/185 (9%)
Frame = +1
Query: 157 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 336
N E D KLFVGGL+ ETT++ LR++F AYGE+ + V D T +SRGF ++ F
Sbjct: 3 NRQENTNNDPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTF 62
Query: 337 ---KAPESI--DKVMAAGEHTINNKKVDPKKAKARHG----------KIFVGGLSSEISD 471
K ++ DKV G H I+ K+V+ K+A R KIFVGGL + +
Sbjct: 63 ADYKVTRNVLKDKV-ENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPEDATK 121
Query: 472 DEIRNFFSEF--GTILEVEMPFDK-TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEV 642
++I+ + +V++ K + + +GF F+ +E ++L K + GK V
Sbjct: 122 EDIQEAIESLLEEKVDKVDLIMKKEDETKHRGFAFVELNNEDQADELCCVKKIHVKGKMV 181
Query: 643 DVKRA 657
+ K+A
Sbjct: 182 EAKKA 186
Score = 41.5 bits (93), Expect = 6e-04
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Frame = +1
Query: 82 FAQDITTDNQLNGNAENGGG--DSQDHNSAEAPGRDDD--------RKLFVGGLSWETTD 231
FA T N L ENG D ++ A RDD+ +K+FVGGL + T
Sbjct: 62 FADYKVTRNVLKDKVENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPEDATK 121
Query: 232 KELRDHFGAYGE--IESINV--KTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 399
+++++ + E ++ +++ K + T + RGFAF+ + D++ + + K
Sbjct: 122 EDIQEAIESLLEEKVDKVDLIMKKEDET-KHRGFAFVELNNEDQADELCCVKKIHVKGKM 180
Query: 400 VDPKKAKAR 426
V+ KKA R
Sbjct: 181 VEAKKATPR 189
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 81.0 bits (191), Expect = 8e-16
Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 2/153 (1%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHFGAYGE-IESIN-VKTDPNTGRSRGFAFIVFKAPESIDKV 363
R +FVG L T + + ++F GE +E + ++T +G+S+GFAF+ + E+++ V
Sbjct: 42 RTIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRT--LSGKSKGFAFVRLRKKEAVESV 99
Query: 364 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 543
+ +H I+N V +K + K+ + + S I + +I FS G I V +P +
Sbjct: 100 LGRDDHVIDNSDVSMEKQDT-YRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKT 158
Query: 544 NQRKGFCFITFESEQVVNDLLKTPKRTIGGKEV 642
+RKG C +TF S +++K K I G ++
Sbjct: 159 KERKGHCIVTFASVTEAFEVVKKRKHHIHGYDI 191
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/170 (18%), Positives = 80/170 (47%), Gaps = 2/170 (1%)
Frame = +1
Query: 151 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 330
D++ +D RK+ + + + ++ +HF + GEI S+ + + T +G +
Sbjct: 108 DNSDVSMEKQDTYRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCIV 167
Query: 331 VFKAPESIDKVMAAGEHTINNKKV--DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 504
F + +V+ +H I+ + + + K+ + L ++ D+I+N FG
Sbjct: 168 TFASVTEAFEVVKKRKHHIHGYDIITEYYMNLKQPKKLCLKNLPYNVTVDQIKNRMDGFG 227
Query: 505 TILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKR 654
++E+++ +++ + F+ F +E + +++K K + G V+ ++
Sbjct: 228 GLMEIDLAVMPDRSECE--AFLIFSNEDSIREIMKQGKISFGDSLVNTEQ 275
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +1
Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 615
IFVG L + I +FS G +E + KGF F+ ++ V +L
Sbjct: 44 IFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRKKEAVESVLGRD 103
Query: 616 KRTIGGKEVDVKR 654
I +V +++
Sbjct: 104 DHVIDNSDVSMEK 116
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 80.6 bits (190), Expect = 1e-15
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Frame = +1
Query: 238 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 417
LR HF +GE++ V DP T RSRGF F+ FK P+++D V+ +G +++D KK
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGA-----QELDGKKM 178
Query: 418 KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF-ITFESEQVV 594
KIF+GGLS+ S+++++ +FS+FG + E + K++ + +
Sbjct: 179 VTTTKKIFIGGLSTNTSEEDMKKYFSQFGKV-SCEYETEDVKDELAAVLISVHSNGTHIT 237
Query: 595 NDLLKTPKRT 624
N TP +T
Sbjct: 238 NQTPSTPNQT 247
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/62 (25%), Positives = 35/62 (56%)
Frame = +1
Query: 457 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 636
++ S + +R F +FG + E + D + +GF F+TF+ + V+ +L + + + GK
Sbjct: 117 TQASAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGK 176
Query: 637 EV 642
++
Sbjct: 177 KM 178
Score = 32.3 bits (70), Expect = 0.36
Identities = 9/27 (33%), Positives = 22/27 (81%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEI 270
+K+F+GGLS T++++++ +F +G++
Sbjct: 183 KKIFIGGLSTNTSEEDMKKYFSQFGKV 209
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 79.8 bits (188), Expect = 2e-15
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Frame = +1
Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 375
L V GL + TT+ E++++F +GEI+ VK DPNT RSRGF F+ FK E V++
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLST- 175
Query: 376 EHTINNKKVD-----PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT 540
H I + + PK+ K+FVG L ++ + +F++FG + +V +P
Sbjct: 176 SHRIQGRLCEVRLPRPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIP---- 231
Query: 541 KNQRKGFCFITFES 582
+ F F+TF S
Sbjct: 232 -KPFRHFGFVTFAS 244
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/74 (28%), Positives = 40/74 (54%)
Frame = +1
Query: 430 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 609
G + V GL ++ E++ +F+ FG I E+ D + +GF F+ F+ ++ ++L
Sbjct: 115 GDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLS 174
Query: 610 TPKRTIGGKEVDVK 651
T R I G+ +V+
Sbjct: 175 TSHR-IQGRLCEVR 187
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 321
+KLFVG L TT+K L ++F +GE+ + + P R GF
Sbjct: 199 KKLFVGRLPESTTEKTLMEYFAQFGEVTDVYI---PKPFRHFGF 239
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/113 (35%), Positives = 64/113 (56%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
+ R +FVGGL+ T ++ L+D+F +GE+ES+ + G SR + F++FK + K
Sbjct: 78 NSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFK-DDGPSKE 135
Query: 364 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVE 522
+ H IN K VD K++ I+VGGL S ++ +R F +FG I V+
Sbjct: 136 VLKKSHVINGKTVDVGKSR-NFRVIYVGGLPSHFTEQTVREHFKKFGVIEAVK 187
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +1
Query: 187 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 366
+R LFV LS +T + ++ +F YG++ +++ TD TG+S+G + + P +++K++
Sbjct: 318 ERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKIL 377
Query: 367 AAGEHTINNKKV 402
H I +V
Sbjct: 378 EEPVHVIGKSQV 389
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/90 (25%), Positives = 45/90 (50%)
Frame = +1
Query: 388 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 567
N+ PK + +FVGGL+S ++ ++++F +FG + V + + + F
Sbjct: 66 NSTLPSPKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRI-MRTFLGYSRNYGF 124
Query: 568 ITFESEQVVNDLLKTPKRTIGGKEVDVKRA 657
+ F+ + ++LK I GK VDV ++
Sbjct: 125 VLFKDDGPSKEVLK-KSHVINGKTVDVGKS 153
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/118 (21%), Positives = 52/118 (44%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 369
R ++VGGL T++ +R+HF +G IE++ + + G G + E + +
Sbjct: 157 RVIYVGGLPSHFTEQTVREHFKKFGVIEAVKFIENTSVGAKTGXXXXE-EDQEILGCPVT 215
Query: 370 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 543
+ D + K+ V L + + DE+R +F + G + +++ + K
Sbjct: 216 VRARSGKESNEDLMAKVIQSKKLMVQDLDFDTTVDELREYFEKCGELTGIDLLINSEK 273
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 66.1 bits (154), Expect = 2e-11
Identities = 39/173 (22%), Positives = 89/173 (51%), Gaps = 18/173 (10%)
Frame = +1
Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES------- 351
+++VG +++E ++ +R F +G I I++ DP + +GFAF+ + PE+
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQ 162
Query: 352 IDKVMAAGEHT-----INNKKVDP-----KKAKARHGKIFVGGLSSEISDDEIRNFFSEF 501
++ V+ G + N + P ++ ++ +I++ + ++ +D+I++ F F
Sbjct: 163 MNGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVFEAF 222
Query: 502 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEVDVKRA 657
G ++ + + + KG+ FI +E++Q ND + + +GG+ + V RA
Sbjct: 223 GKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGGQFLRVGRA 275
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 409 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
++A A +++VG ++ E+ ++ IR F FG I ++++ +D + KGF F+ ++ +
Sbjct: 95 QRALALMCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPE 154
Query: 589 VVNDLLKTPKRT-IGGKEVDVKR 654
L+ +GG+ + V R
Sbjct: 155 AAQLALEQMNGVLLGGRNIKVGR 177
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 61.7 bits (143), Expect = 5e-10
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 7/185 (3%)
Frame = +1
Query: 76 DNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFG 255
D A +T+ ++ D D + L++ GL TTD +L
Sbjct: 62 DKKAYSVTSSQSPGLSSGRSSSDRMDSLPDTGEEKLSKTNLYIRGLKANTTDDDLVRLCH 121
Query: 256 AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-- 429
YG I S D +T +G+ F+ F++P S K +AA + NK + + AK +
Sbjct: 122 KYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAVAA----LVNKGIQAQMAKQQEQD 177
Query: 430 -GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES----EQVV 594
+++ L + + N FS++G ++ + DK N KG F ES EQV+
Sbjct: 178 PTNLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDTNS-KGVGFARMESAEKCEQVI 236
Query: 595 NDLLK 609
D K
Sbjct: 237 KDFNK 241
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/174 (22%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
Frame = +1
Query: 112 LNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 291
++ N++ D +H E D+ L + + + ++++ FG G + S +
Sbjct: 1 MDDNSKAMAEDINNHEPMENGTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIR 60
Query: 292 DPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNK--KVD---PKKAKARHGKIFVGGL 453
D TG+S G+AF+ + P+ +K V + NK KV P + ++ +++ GL
Sbjct: 61 DRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARPSSTEIKNANLYISGL 120
Query: 454 SSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF----ESEQVVNDL 603
++ ++E+ F FG I+ ++ D + +G F+ F E++ ++DL
Sbjct: 121 PKDMKEEEVEALFKPFGKIITSKVLKD-VSGEGRGTGFVRFDKRCEAQTAIDDL 173
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 57.6 bits (133), Expect = 8e-09
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Frame = +1
Query: 178 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 357
R+ D ++VGGL + ++ + + F G + ++++ D T +G+ F+ F E D
Sbjct: 9 RNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDAD 68
Query: 358 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILE 516
+ + K + KA A + +F+G L +E+ + + + FS FG IL+
Sbjct: 69 YAIKVMNMIKVYGKPIRVNKASAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQ 128
Query: 517 V-EMPFDKTKNQRKGFCFITFES 582
++ D KGF FI F S
Sbjct: 129 TPKIMRDSDTGNSKGFAFINFAS 151
Score = 48.0 bits (109), Expect = 7e-06
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +1
Query: 160 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVF 336
SA D LF+G L E +K L D F A+G I ++ + D +TG S+GFAFI F
Sbjct: 90 SAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINF 149
Query: 337 KAPESIDKVMAA--GEHTIN 390
+ ++ D + A G++ N
Sbjct: 150 ASFDASDAAIEAMNGQYLCN 169
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 406 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 585
P + + I+VGGL ++S+ I F + G ++ V MP D+ +G+ F+ F E
Sbjct: 5 PIAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGE 64
Query: 586 QVVNDLLKTPKR-TIGGKEVDVKRA 657
+ + +K + GK + V +A
Sbjct: 65 EDADYAIKVMNMIKVYGKPIRVNKA 89
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Frame = +1
Query: 166 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 345
E+ D R +F L+ ++L + F G++ + + +D N+ RS+G A+I F
Sbjct: 138 ESAEEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDK 197
Query: 346 ESIDKVMA-AGEHTI-------------NNKKVDPKKAKARHG--KIFVGGLSSEISDDE 477
++ + +G+ + N + ++ K G +++VG L I++
Sbjct: 198 SAVPLAIGLSGQKLLGAPIMVMLTQAEKNRLAAEAERLKQPLGPTRLYVGSLHFNITEAM 257
Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
++ F FGT+ V++ +D N+ KG+ F+ F +
Sbjct: 258 VKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAE 294
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +1
Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 366
+L+VG L + T+ ++ F +G ++S+ + D T RS+G+ F+ F+ E+ + M
Sbjct: 243 RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAM 300
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 55.2 bits (127), Expect = 4e-08
Identities = 42/171 (24%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Frame = +1
Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP---ESIDKVM 366
L+VG L+ + T+ L + F G + SI V D T RS G+A++ F+ P +++ +
Sbjct: 15 LYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHDAALEAIA 74
Query: 367 AAGEHTINNKKV------DPKKAKARHG-------KIFVGGLSSEISDDEIRNFFSEFGT 507
+N+KKV K+ + G ++V ++ D++++ +E G
Sbjct: 75 RVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGK 134
Query: 508 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK-RTIGGKEVDVKRA 657
I+ +++ D + + KGF F++FE+ + + + + IGG+ + RA
Sbjct: 135 IVSLKVMTD-PEGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRA 184
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +1
Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 366
L++ L D+ LR+ F YG I S V D + G S+GF F+ F +PE K +
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAV 269
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 612
K+FVGG+ E DD +R FF++FG I E + D+ + KG+ F+T + K
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKN 70
Query: 613 PKRTIGGKEVDVKRA 657
+ I G++ +V A
Sbjct: 71 KRPMIEGRQANVNLA 85
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +1
Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 357
KLFVGG+ +E+ D LR F +GEI V D T +S+G+ F+ ++ +
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAE 65
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 50.8 bits (116), Expect = 1e-06
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Frame = +1
Query: 133 GGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR 309
GGG +++ E PG R LFVG + TT +L++ F YGE+ +++K P
Sbjct: 231 GGGSISNYSEDEFDPGCT--RTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPG--- 285
Query: 310 SRGFAFIVF-KAPESIDKVMAAGEHTINNKKVDPKKAKARH-GKIFVGGLSSEISDDEIR 483
+ +AF+ F + +I + +V K I+VGG+++ +S+ ++
Sbjct: 286 NNPYAFVQFAELSSAIQARRKMDREYVGRNRVKVGFGKVNPINTIWVGGVTNSLSEQQVE 345
Query: 484 NFFSEFGTILEV 519
F +G + +V
Sbjct: 346 RHFGRYGRVTKV 357
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINV--KTDPNTGRSRGFAFI 330
+ R L+VG L ++++ HF YG +ES+ + K GR+ F+
Sbjct: 4 ETRHLWVGNLPENIREEDIVKHFTRYGRVESVKILPKRSAEGGRASFVDFV 54
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPN 300
++VGG++ +++++ HFG YG + + + N
Sbjct: 330 IWVGGVTNSLSEQQVERHFGRYGRVTKVVINRVTN 364
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +1
Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 603
+IFV G + E ++ E+R FF E+G + E ++ DK KG+ FITFES++V + L
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDK-HGVSKGYAFITFESQEVADGL 64
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +1
Query: 178 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 357
+D +++FV G + ETT+ ELR F YG ++ + D + G S+G+AFI F++ E D
Sbjct: 4 QDISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKH-GVSKGYAFITFESQEVAD 62
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 50.4 bits (115), Expect = 1e-06
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 11/189 (5%)
Frame = +1
Query: 64 MANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDR---KLFVGGLSWETTDK 234
+ + + DITT + G G + PG ++ ++F+G + + +
Sbjct: 114 LLDRTGYTLDITTGQRKYGGPPPGW-------EGKPPGTGSEKVCSQVFIGKVPRDCFED 166
Query: 235 ELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK 414
EL F G I + DP +G ++GFAF F + + ++NK++ P K
Sbjct: 167 ELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAV----KKLDNKEIRPGK 222
Query: 415 -----AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE---VEMPFDKTKNQRKGFCFI 570
+ ++FVG + S EI FS+ L+ V + D+ K + +GF F+
Sbjct: 223 RLGVCISVANSRLFVGSIPKTKSKQEILEEFSKVTNGLDDVIVYLSADQ-KGKNRGFAFL 281
Query: 571 TFESEQVVN 597
+ES Q +
Sbjct: 282 EYESHQAAS 290
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 609
++F+G + + +DE+ F E G I + + D KGF F TF ++ + +K
Sbjct: 153 QVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVK 211
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Frame = +1
Query: 325 FIVFKAPESIDKVMAAGEHTIN--NKKVD---PKKAKARHGKIFVGGLSSEISDDEIRNF 489
++V+KA E+ ++ +A+ I+ + +VD KA +F+G L +I ++ +R
Sbjct: 16 YVVYKAAENANQAIASNGEEIDGFHIRVDLASNDKAHDHQRSVFIGNLPFDIEEEPLREL 75
Query: 490 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDV 648
F+ G + V + D+ KGF ++ FES+ V LK G+++ V
Sbjct: 76 FTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKIRV 128
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/98 (21%), Positives = 48/98 (48%)
Frame = +1
Query: 181 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 360
D R +F+G L ++ ++ LR+ F G +ES+ + D TG +GF +++F++ +++
Sbjct: 53 DHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVF 112
Query: 361 VMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDD 474
+ +K+ +K + F+ + D+
Sbjct: 113 ALKMNNAEFKGRKIRVFPSKDKPQTEFISHIQVRFRDN 150
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/62 (32%), Positives = 39/62 (62%)
Frame = +1
Query: 169 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 348
A G + RKL++G L++ + + E+ F +G +E +++ D +GRSRGF F++ ++ +
Sbjct: 2 ADGENRGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSAD 60
Query: 349 SI 354
I
Sbjct: 61 QI 62
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 424 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVND 600
R K+++G L+ + EI F EFG + +V++ DK + +GF F+ +S +Q+
Sbjct: 7 RGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPA 65
Query: 601 LLKTPKRTIGGKEVDVKRA 657
+ K + ++GG+ + V A
Sbjct: 66 IEKMNQSSVGGRNITVALA 84
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/104 (24%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +1
Query: 67 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRD--DDRKLFVGGLSWETTDKEL 240
+++D + ++ D+ N ++ D++S + D + +F+ LS+++T K +
Sbjct: 373 SDDDEDVKHMSKDDNNNEKSDEDDASEDDNHSQRSKPSDVKEGLTVFIRNLSFDSTQKNI 432
Query: 241 RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 372
+ F +G+I V D T S+G AF+ +++ ES+ + +AA
Sbjct: 433 TNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAA 476
Score = 41.1 bits (92), Expect = 8e-04
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Frame = +1
Query: 145 SQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 324
S+ + +AP D R + + GL T+K++ GE+E + +
Sbjct: 145 SKSKSLRKAPQTDAGRTVILSGLPASITEKQIYKRCRKLGEVEKTIFPVAGHDSPTASLL 204
Query: 325 FIVFK-APESIDKVMAAGEHTINNKKVDPKKAK------ARHGKIFVGGLSSEISDDEIR 483
F +K A +++ K+ + K V K K ++ ++ + L+ ++ ++
Sbjct: 205 FKSYKDARQAVAKLNGKTLKGVKVKAVIESKDKSSSPKGSKKSRLIIRNLAFNCTEAILK 264
Query: 484 NFFSEFGTILEVEMPFDKT--KNQRKGFCFITF 576
FS FG + E +P K +N++ GF F+ F
Sbjct: 265 ETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQF 297
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +1
Query: 388 NNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 564
+N K + + G +F+ LS + + I N F +FG I ++ D KG
Sbjct: 401 DNHSQRSKPSDVKEGLTVFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSA 460
Query: 565 FITFESEQVVNDLLKTPKRTIGGKEVDVKR 654
F+ + S + V L G +D R
Sbjct: 461 FVKYRSAESVTQCLAATDEDSEGLFLDGNR 490
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 47.6 bits (108), Expect = 9e-06
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Frame = +1
Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 372
++F+G + + + EL GEI ++ DP TG ++GFAF F S + +
Sbjct: 154 EVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAIT- 212
Query: 373 GEHTINNKKVDPKK----AKAR-HGKIFVGGLSSEISDDEIRNFFSEFGTILE 516
T+N+K + P + K+R + ++FV G+ S +EI FS+ T L+
Sbjct: 213 ---TLNDKDIRPGRRLAICKSRSNSRLFVKGIPKRKSKEEIFQEFSKVTTDLQ 262
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 585
++F+G + + +DE+ + G I E + D KGF F TF +
Sbjct: 154 EVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQ 204
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 21/87 (24%)
Frame = +1
Query: 313 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA---------------------KARH 429
+GF F+ F+ P +I+ V+A H ++ K +DPK A A
Sbjct: 142 KGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRGPGQQAQTGAVMGGPQRGSAND 201
Query: 430 GKIFVGGLSSEISDDEIRNFFSEFGTI 510
GK+F+GGL+ ++++++ +FS +G +
Sbjct: 202 GKVFIGGLAFGTTEEDLKEYFSTYGMV 228
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = +1
Query: 175 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIE 273
G +D K+F+GGL++ TT+++L+++F YG +E
Sbjct: 197 GSANDGKVFIGGLAFGTTEEDLKEYFSTYGMVE 229
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 529 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 657
F++ KGF F+TF + +L + GK +D K A
Sbjct: 134 FERRARMLKGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPA 176
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +1
Query: 97 TTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIES 276
T DN+ +G+ ++ D D + + DDD GG + ++ +H A G +E+
Sbjct: 428 TGDNR-DGDDDDDDDDDDDDDDDDDDDDDDDDDDDGGGDDDDDYERGAINHSNA-GPLEN 485
Query: 277 INVKTDPNTGRSRGFAFIVFKAPESI 354
+ + TD NTG+ R F F+ F +P S+
Sbjct: 486 VRIPTDKNTGQQRSFGFVEFSSPVSV 511
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Frame = +1
Query: 289 TDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKA----RHGKIFVGGL 453
T P R R + V K+P K ++ + ++ P++ K + K++V L
Sbjct: 1106 TKPRPSR-RSLSKSVSKSPSPARKGKRSSSSSSSRSRSRSPRRRKRSPTPKPTKLYVAHL 1164
Query: 454 SSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIG 630
+ ++ D ++ FS +G + V++P D+T N +GF ++ + + E+ L I
Sbjct: 1165 TRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHMDGGQID 1224
Query: 631 GKEVDVK 651
G+E+ V+
Sbjct: 1225 GQEIAVQ 1231
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +1
Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 366
KL+V L+ +++ F YG ++++++ TD SRGFA++ + PE +K +
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKAL 1215
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +1
Query: 292 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 426
D T R RGF F+ F++ S DK H INNKKV+ KKA+ +
Sbjct: 5 DKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 529 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 657
FDK + +GF F+TFESE + T I K+V+VK+A
Sbjct: 4 FDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKA 46
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +1
Query: 439 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 579
+VGGL+ E+ + + F FG I +V++P D T ++ +GF F+ FE
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFE 54
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 348
R +VGGL+ E +K L F +G+I + + D T + RGF F+ F+ E
Sbjct: 5 RVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAE 57
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 45.2 bits (102), Expect = 5e-05
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Frame = +1
Query: 133 GGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 303
GGG+ P +D R LFVG L + ++LR F +G + +++K P
Sbjct: 215 GGGNFTPPQQEYIPPEEDPKATRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKR-PAR 273
Query: 304 GRSRGFAFIVFKAPESIDKVMAAGEHTI---NNKKVDPKKAKARHGKIFVGGLSSEISDD 474
G+ +AF+ F + K A + N+ K+ +++ + +++VGGL IS
Sbjct: 274 GQGNTYAFVKFADLDVAAKAKCAMQGQCIGRNHIKIGYGRSQ-QTTRLWVGGLGPWISIP 332
Query: 475 EIRNFFSEFGTILEVE 522
E+ F FG I ++
Sbjct: 333 ELEREFDRFGAIRRID 348
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +1
Query: 403 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
DPK + +FVG L + IS ++R F +FG +L+V++ + Q + F+ F
Sbjct: 232 DPKATRT----LFVGNLETGISCQDLRLSFEKFGVVLDVDIK-RPARGQGNTYAFVKF 284
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 394 KKVDPK--KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 567
KK+ PK + + G I++G + ++EI+ FF +FGT+ + + K + KG+ F
Sbjct: 84 KKIKPKGDEDELSPGVIYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAF 143
Query: 568 ITFESEQV 591
+ F ++V
Sbjct: 144 VEFACDEV 151
Score = 34.3 bits (75), Expect = 0.089
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +1
Query: 70 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK----LFVGGLSWETTDKE 237
N+ N +DI L+ + + + +D P D+D +++G + + E
Sbjct: 57 NSVNTTKDINATLALDSDKQK---EFEDKVKKIKPKGDEDELSPGVIYLGHIPHGFFENE 113
Query: 238 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH 381
++ F +G + I + + RS+G+AF+ F A + + K+ A H
Sbjct: 114 IKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEF-ACDEVAKIAADTMH 160
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 44.4 bits (100), Expect = 8e-05
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = +1
Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 372
L V + + TD+ R F A + + + +G S GF F+ + E K +
Sbjct: 49 LIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKL 108
Query: 373 GEHTINNK--KV---DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 537
TI NK KV P + ++V + ++ + E R F +G I+ + DK
Sbjct: 109 NGFTIGNKVLKVAFSRPGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDK 168
Query: 538 TKNQRKGFCFITFESE 585
+ KG F+ ++ +
Sbjct: 169 STGLPKGCGFVLYDKK 184
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 412 KAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
K++A G ++V + + + + I F + G + +V++ +D + Q KGFCF+T +++
Sbjct: 268 KSQAPPGCTLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQE 327
Query: 589 VVNDLLKT 612
+ ++T
Sbjct: 328 EAQNAIQT 335
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 172 PGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 336
PG D+ + L+V + + + E R F AYG I + + D +TG +G F+++
Sbjct: 125 PGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLY 181
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
D R +++ + L FG YG IE +++ TG+S+GF ++ ++ ES +
Sbjct: 61 DQRTIYIRDFRPDIRKSSLESVFGPYGAIEDLSI-IRTQTGKSKGFGYVTYENAESAQRA 119
Query: 364 MAAGEHTINNKKV--DPK 411
+ AG H I+ K V +PK
Sbjct: 120 L-AGTHIIDGKWVIAEPK 136
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 285
DDRKLFVG +S +++LR F +G IE + V
Sbjct: 212 DDRKLFVGMISKHAKEEDLRVMFSPFGTIEELTV 245
Score = 31.9 bits (69), Expect(2) = 1e-04
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 157 NSAEAPGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 315
N RD + KLFVG + +K+LR F YG+I + + D TG+ +
Sbjct: 158 NGGTTSVRDSNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
Score = 31.5 bits (68), Expect(2) = 1e-04
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEV 519
K+FVG +S ++++R FS FGTI E+
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEEL 243
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +1
Query: 172 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 351
P D L V L++ TT ++L+ F YG++ I + D NT SRGFAF+ F
Sbjct: 10 PEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRD 69
Query: 352 IDKVM 366
+ M
Sbjct: 70 AEDAM 74
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/59 (32%), Positives = 37/59 (62%)
Frame = +1
Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 609
+IF G L SE++D+ + F+++ + L+ ++ DK N+ KG+ F++F+ ND +K
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDP---NDFIK 273
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
+D ++F G L E TD+ L F Y + D + +S+G+ F+ FK P K
Sbjct: 215 NDFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKA 274
Query: 364 M 366
M
Sbjct: 275 M 275
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
++ K ++G L ++ + +L+D F Y ++ + V +D T R RGFAF+ F + ++++
Sbjct: 228 EECKCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDA 286
Query: 364 ---MAAGEHTINNKKVDPKKAKARHGKIFVGGLSS 459
+ E + KV+ +++ + G GG S
Sbjct: 287 INELDGQEFDGRSMKVNQARSREQRGGGRGGGYRS 321
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/76 (22%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +1
Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-K 609
K ++G L ++++ ++++ FS + +++V++ D+ + +GF F+TF S++ + D + +
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRYD-VVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINE 289
Query: 610 TPKRTIGGKEVDVKRA 657
+ G+ + V +A
Sbjct: 290 LDGQEFDGRSMKVNQA 305
Score = 35.1 bits (77), Expect = 0.051
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 274 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM 366
S+ V TD TGR RGF F+ F + + +DK +
Sbjct: 37 SVKVITDRETGRPRGFGFVTFGSEDEMDKAI 67
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
++ + ++G LS+ ++ L + F ++ + V TD TGR RGF F+ F + E ++K
Sbjct: 3 EEYRCYIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKA 61
Query: 364 M 366
+
Sbjct: 62 I 62
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/52 (23%), Positives = 29/52 (55%)
Frame = +1
Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
+ ++G LS + + + F +++V++ D+ + +GF F+TF S++
Sbjct: 6 RCYIGNLSYSVDEQALEEKFHGCD-VVDVKVITDRETGRPRGFGFVTFGSKE 56
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 372
++VG L + T+ +L F YG++ + + D T SRG AFI+F +S +AA
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAA 70
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 41.5 bits (93), Expect = 6e-04
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = +1
Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
+FVG + E S+++++ FSE G ++ + FD+ + KG+ F ++ ++
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQE 77
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 351
R +FVG + +E ++++L++ F G + S + D TG+ +G+ F +K E+
Sbjct: 25 RSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQET 78
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +1
Query: 124 AENGGGDSQDHNSAEAPGRD---DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTD 294
A + G +D + P D D LFV L+ TTD++L F +G I S V D
Sbjct: 95 ARSPNGLIRDDRIGDIPDADIKPPDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRD 154
Query: 295 PNTGRSRGFAFIVFKAPESIDK 360
TG S +AFI F+ E ++
Sbjct: 155 QKTGESLQYAFIEFEKDEDCER 176
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
+FV L+ +D+++ FS FGTIL E+ D+ + + FI FE ++
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDE 172
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +1
Query: 181 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAF 327
D K+F+GGL + ++++ ++GE+ + N+ D TG S+G+AF
Sbjct: 670 DSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAF 718
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 609
KIF+GGL + +++D+++ S FG + + D KG+ F + + + ++
Sbjct: 674 KIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQG 733
Query: 610 TPKRTIGGKEVDVKRA 657
+G K++ V+RA
Sbjct: 734 LNGMQLGDKKLIVQRA 749
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 472 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
D ++ FSEFG +L V +P K + KGF FI FES+Q
Sbjct: 102 DWLKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQ 140
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +1
Query: 238 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK 414
L+ F +G++ +++ + G +GFAFI F++ + + V+ KK + ++
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFNRESKTKKEEKRE 162
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = +1
Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 375
L+VGGL + T+++LRDHF +GE+ SI++ N AF+ F + + + AA
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNC------AFVCFTSRAAAE---AAA 356
Query: 376 EHTINNKKVDPKKAKARHGK 435
+ + N + ++ K GK
Sbjct: 357 DRSFNKLILKGRRLKIMWGK 376
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/30 (30%), Positives = 21/30 (70%)
Frame = +1
Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEM 525
++VGGL ++++ ++R+ F +FG + + M
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISM 335
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Frame = +1
Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF----KAPESIDKV 363
LFVG L +E T+ + D YG IE + + TG S+G+ F+ + A ++ ++
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 364 MAAGEHTINNKKVDPKKAKAR-------HGK-IFVGGLSSEISDDE-IRNFFSEFGTILE 516
+ I + + A++ H + +FV L + + I+ FS+ G +
Sbjct: 175 LNTASKYIGGRILRVAFAESNLLTYADVHSRTLFVDRLPRDFKNGGLIKELFSQTGNVTF 234
Query: 517 VEMPFDKTKNQRKGFCFITFESEQ 588
++ + +GF F+ + + +
Sbjct: 235 AQVAINPANGGSRGFAFVDYATAE 258
Score = 35.5 bits (78), Expect = 0.038
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 366
R LFV L + + L ++ F G + V +P G SRGFAF+ + E +K
Sbjct: 205 RTLFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEK-- 262
Query: 367 AAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 510
G+ N ++V+ + +G G + I ++ N + + T+
Sbjct: 263 --GQRAHNGRQVEGSNIRVAYGS--PGRTGASILGSQLDNTQAGYTTV 306
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE----QVVNDL 603
+FVG L E ++ + + S +G I + + + KG+ F+ + + Q L
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 604 LKTPKRTIGGK 636
L T + IGG+
Sbjct: 175 LNTASKYIGGR 185
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 40.7 bits (91), Expect = 0.001
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 22/137 (16%)
Frame = +1
Query: 277 INVKTDPNTGRSRGFAFIVF-------KAPESIDKVMAAGEHTINN---KKVDPKKAKAR 426
+ V DP +S+GF F+ F KA +D V G+ N +K +P + K
Sbjct: 542 VRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQTKPL 601
Query: 427 ------------HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 570
+ ++VG L ++ D E++ FS++G+ILE ++ D KG+ FI
Sbjct: 602 VWDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFAD------KGYAFI 655
Query: 571 TFESEQVVNDLLKTPKR 621
E+ L + +R
Sbjct: 656 NARGEKRRQRCLTSSRR 672
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 514 EVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEV 642
EV + D KN+ KGF F++F E + + TIGGK+V
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQV 584
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +1
Query: 118 GNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVK 288
GN GGG + + GRD + L V LS++TT L A+ + V
Sbjct: 262 GNTPRGGGRGRGGRGGFSGGRDQNPPNSSLIVRNLSYDTTTDSLG---AAFEGCSNAKVI 318
Query: 289 TDPNTGRSRGFAFIVFKAPESIDKVMA 369
D +G SRGF F+ + E+ KV++
Sbjct: 319 FDRESGESRGFGFVDYDDVETAKKVLS 345
Score = 35.1 bits (77), Expect = 0.051
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
++ +F+G LS++ ++ L F G + V T GRSRGF + F + E +K
Sbjct: 178 EEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVIT--QEGRSRGFGYADFTSKEDYNKA 235
Query: 364 MAA-GEHTINNK-KVDPKKAKARHG 432
+ GE + +++P +K G
Sbjct: 236 LELNGEDCCGREIRINPANSKPSRG 260
Score = 33.5 bits (73), Expect = 0.15
Identities = 26/107 (24%), Positives = 45/107 (42%)
Frame = +1
Query: 337 KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 516
K S + + E T KK P K + +F+G LS + ++ + FF E G L
Sbjct: 152 KEESSSESDSDSDEETPTPKKTVPAKEEM---SVFLGNLSFDADEETLAAFFEEKG--LS 206
Query: 517 VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 657
+ + +GF + F S++ N L+ G+E+ + A
Sbjct: 207 ATCRVITQEGRSRGFGYADFTSKEDYNKALELNGEDCCGREIRINPA 253
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-ESIDK 360
+D +++VG L + +K+L D F YG I +++K G FAF+ F+ P ++ D
Sbjct: 259 NDCRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKN--RRGAGPPFAFVEFEDPRDAEDA 316
Query: 361 VMAAGEHTINNKKVDPKKAKARHGKIFVGG 450
V H + ++ + + G+ GG
Sbjct: 317 VKGRDGHEFDGYRIRVEFPRGGSGRGGGGG 346
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI---VFKAPESIDKVM 366
LFV + E + ++ + F YGEI++++V D TG +G+A + FK +S + +
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 367 AAGEHTINNKKVD 405
E N VD
Sbjct: 355 NGAEMLGQNISVD 367
Score = 34.7 bits (76), Expect = 0.067
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 582
+FV + E +D+I FS++G I + + D+ KG+ + +E+
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYET 343
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = +1
Query: 400 VDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 579
VD K + +FV L EI+ + + +FFS G I + M D K R + +I F
Sbjct: 62 VDANKVEEIRRTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGKPTR--YAYIEFA 119
Query: 580 SEQVVNDLLKTPKRTIGGKEV 642
Q + L+ GGK +
Sbjct: 120 ETQAIVSALQYSGAIFGGKPI 140
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 253 GAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTIN--NKKVDPKKAKAR 426
GA+G + ++ + N ++ + KA E + V A + +K + K +
Sbjct: 20 GAHGLLGALEISPHENYQQNGNSS--TNKAREISNNVAALPIDLVGEVSKDISKYKVVSN 77
Query: 427 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 558
K+FVG + ++ E+++FF FG ++ ++ D+ K + KG
Sbjct: 78 KCKVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 318
K+FVG + ++ +EL+D FG +G++ + D RS+G
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Frame = +1
Query: 343 PESI-DKVMAAGEHTIN-NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 516
PE++ D+++ + ++N + D + K+FVGGL +I +DEI F FG+ L
Sbjct: 313 PENLADQIVPSLASSLNCSPNSDSEHIPRFSRKVFVGGLPPDIDEDEIHASFCRFGS-LT 371
Query: 517 VEMPF---DKTKNQRKGFCFITFESEQVVNDLL 606
V+ P K+ KG+ F+ + E V L+
Sbjct: 372 VDWPHKAESKSYFPPKGYAFLLYLEEISVQKLI 404
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHFGAYGE--IESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
RK+FVGGL + + E+ F +G ++ + + +G+AF+++ S+ K+
Sbjct: 344 RKVFVGGLPPDIDEDEIHASFCRFGSLTVDWPHKAESKSYFPPKGYAFLLYLEEISVQKL 403
Query: 364 MAA 372
++A
Sbjct: 404 ISA 406
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 271 ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 366
E++N+ TD TGR RGF F+ F + E ++K +
Sbjct: 123 EAVNIITDRETGRPRGFGFVTFGSKEEMEKAI 154
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +1
Query: 187 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 351
+ + ++G LS+ ++ L + F ++ + V TD TGR RGF F+ +A ++
Sbjct: 81 EHRCYIGNLSYSVDEQALEEKFHDCNVVD-VRVITDRETGRPRGFGFVTLEAKKT 134
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = +1
Query: 421 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
A H + ++G LS + + + F + +++V + D+ + +GF F+T E+++
Sbjct: 80 AEH-RCYIGNLSYSVDEQALEEKFHDCN-VVDVRVITDRETGRPRGFGFVTLEAKK 133
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 166 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 336
+ G+ + + V LS ET + +L++ F G I I + D T +S+GFAFI F
Sbjct: 173 DGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF 229
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +1
Query: 169 APGRDD---DRKLFVGGLSWETTDKELRDHFGAYGEIESINVK---TDPNTGRSRGFAFI 330
AP DD +RKL++G L ++ + +GEIE PN G RG+ F+
Sbjct: 377 APEIDDAVSERKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFV 436
Query: 331 VFKAPESIDKVM 366
FK E K +
Sbjct: 437 EFKKKEDARKAL 448
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 612
++FVG + ++ +DE+ F G I EV + D Q +G+ F+ + S+ +KT
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMD-FNGQNRGYAFVVYTSKDDAKRCVKT 133
Score = 32.3 bits (70), Expect = 0.36
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +1
Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 372
++FVG + + + EL F G I + + D N G++RG+AF+V+ + + + +
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFN-GQNRGYAFVVYTSKDDAKRCV-- 131
Query: 373 GEHTINNKKV 402
T+NN ++
Sbjct: 132 --KTLNNYEI 139
>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +1
Query: 151 DHNSAEAPGRDDDRK----LFVGGLSWETTDKELRDHFGAY--GEIESINVKTDPNTGRS 312
DHNS D + + GL +E++ ++L F I+ + K+ N G++
Sbjct: 316 DHNSDNGSNSQDQEATSTIVRMFGLPFESSKRDLYKFFNGLKIASIDLLKHKSGKNQGKN 375
Query: 313 RGFAFIVFKAPESIDKVMAAGEHTINNKKVD 405
G AF+VFK+ K + I ++ ++
Sbjct: 376 TGVAFVVFKSNNDASKALKMDRSYIGHRYIE 406
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 34.7 bits (76), Expect = 0.067
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEV 519
++F+G L S + D ++ FS++GTILE+
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILEI 386
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESI 279
D ++F+G L D ++ + F YG I I
Sbjct: 355 DSHQVFIGNLPSGVKDADVNEVFSKYGTILEI 386
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 6/26 (23%), Positives = 17/26 (65%)
Frame = +1
Query: 313 RGFAFIVFKAPESIDKVMAAGEHTIN 390
+ F F++F + E + +++A +H ++
Sbjct: 425 KNFGFVIFSSAEPVQQILANKKHFLS 450
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 34.3 bits (75), Expect = 0.089
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 187 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 291
DR +FVG L K L+ +F YGE+ES+ ++
Sbjct: 20 DRTVFVGNLPLTLKKKALKKYFSKYGEVESVRFRS 54
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 34.3 bits (75), Expect = 0.089
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 597
+F+GGL I++ I F G I + + K +N RK FC + F +++ V+
Sbjct: 353 VFIGGLPESINEHIINEIFYVCGEITSIRISKGKGENARK-FCHLRFGAKESVD 405
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 357
R +F+GGL + + + F GEI SI + +R F + F A ES+D
Sbjct: 351 RTVFIGGLPESINEHIINEIFYVCGEITSIRISKGKGE-NARKFCHLRFGAKESVD 405
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +1
Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 372
K++ G L T+K+L + +G++ ++ K G+A++VFK + D+ +AA
Sbjct: 4 KVYCGRLPATATEKDLENLVKVFGKVREVDFK--------EGYAYVVFKENKDADRAVAA 55
Query: 373 -GEHTINNKKVDPKKAK-ARHGKIFVGGLSS 459
+ K+ +KAK R+G VGG ++
Sbjct: 56 LNNSEFHGAKILMEKAKEMRNG---VGGYTA 83
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 472 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
++IR+ F ++GTI +V + DK + +G C++ F
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKF 71
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 232 KELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 411
+++R F YG IE + V D T +RG ++ F S +A E N DPK
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKASS--AALACEEMDGRNIGDDPK 94
Query: 412 KAK 420
K
Sbjct: 95 PIK 97
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = +1
Query: 142 DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 321
+++D + E G+ LFVG L ++ T +++ DHF G S + T S+G
Sbjct: 58 ETEDVITKEQDGKKQRYILFVGNLPFDLTTEKVLDHFRCAGS-SSFRLLTKKTDNSSKGC 116
Query: 322 AFIVFKAPESIDKVMAAGEHTINNKKVD 405
F+ K + + +K++
Sbjct: 117 GFLEIDDSIGYTKALNLHHSYLGGRKIN 144
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 178 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 336
R + K+++G L + +E+ + FG YG ++ + V +P GFAF +F
Sbjct: 28 RAEMTKVYIGSLGDNASKREIENEFGYYGPLKDVWVARNP-----PGFAFCIF 75
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 259 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 351
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.47
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 499 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 259 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 351
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.47
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 499 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 32.3 bits (70), Expect = 0.36
Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Frame = +1
Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVK-----TDPNTGRSRGFAFIVFKAPESID 357
++++G L + TT+ ++R F +YG + IN+K + R A E +
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNNYGFVEFEDDRDADDAVYECNGKEMLG 63
Query: 358 KVMAAGEHT---INNKKVDPKKAKARHG-------KIFVGGLSSEISDDEIRNFFSEFGT 507
+ + EH+ + P + + ++G ++ + LSS +S ++++F + G
Sbjct: 64 ERILV-EHSRGGARSSSSRPSRGRDKYGPPVRTPWRMTIENLSSRVSWQDLKDFCRQVG- 121
Query: 508 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKR 654
++ + QR+G I F ++ DL + K+ + G+E++ KR
Sbjct: 122 ----DVTYGDAHKQRQGEGVIEFSCKR---DLKRALKK-LDGEELNGKR 162
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/43 (27%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +1
Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT-KNQRKGF 561
+++GGLS +++++ + F++FG + +V + D++ K+++ GF
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQSGF 568
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 31.1 bits (67), Expect = 0.83
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Frame = +1
Query: 337 KAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-IFVGGLSSEISDDEIRNFFSEFGTIL 513
K P+S A K P K K GK ++V LSS +++ FS++G ++
Sbjct: 317 KTPDSKKTPAKATPAKATPAKATPTKDKKEGGKSLWVANLSSITRAADLKTRFSQYGKVV 376
Query: 514 EVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVKRA 657
++ + + F +T SE+ + + + G+ + V RA
Sbjct: 377 GAKIVTNSKAPGAQCFGLVTMTTSEEAAKCIQHLHRTELHGRAITVDRA 425
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 31.1 bits (67), Expect = 0.83
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Frame = +1
Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYG-EIESINVKTDPNTG-------RSRGFAFIVFK 339
D K++ G L ++ T EL+ F A + + + +P RSRGF F+ F
Sbjct: 48 DPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFA 107
Query: 340 APESIDKVMAAGEHTINNKKVDPKKAK 420
PE + ++N K+V + K
Sbjct: 108 NPEDAQTAV----KSLNGKEVQGRTLK 130
>SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 73 NDNFAQDITTDNQLNGNAENGGGDSQDH-NSAEAPGRDDD 189
ND+ DI D+ NGN + G D+ D N E G DDD
Sbjct: 20 NDDDGDDIDDDDG-NGNGNDNGDDNDDDDNDDEGNGDDDD 58
>SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 196 LFVGGLSWETTDKE-LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 372
L+VGGL+ T +E L + FG +GEIE I + N AF+ +K+ ++ A
Sbjct: 249 LYVGGLTLHTKLEEWLWEEFGEWGEIEDIRIIPKKN------IAFVRYKS--RLNAEFAK 300
Query: 373 GEHTINNKKVD 405
G+ +++ VD
Sbjct: 301 GDCSLSGAIVD 311
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTD 294
L V GLS TT+++LR F YG +E+I + D
Sbjct: 183 LGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYD 215
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 133 GGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS 312
GGG N + G+D L + L +K+L++ YG + N++ D N G S
Sbjct: 104 GGGGGGMENDVASDGKD----LIIQNLPKGIQEKDLKELLQLYGNVLVCNIERDSN-GDS 158
Query: 313 RGFAFIVF 336
G A + F
Sbjct: 159 SGSALVRF 166
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 175 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 318
G R++ GL+ K L++ YG I++I V DP T +RG
Sbjct: 135 GTPPQREVLFSGLNDNVDKKFLQEICQKYGTIQTIKVYYDPQTKNTRG 182
>SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 70 NNDNFAQDITTDNQLNGNAE----NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKE 237
+ND D D+++NG + N GGD D + + DDD + G S++ D +
Sbjct: 58 DNDGGDDDDDDDDEVNGGNDDDDFNNGGDCDDDDDDDDDDDDDDDDINKKGASYDDDDDD 117
Query: 238 LRDHF 252
D +
Sbjct: 118 DDDGY 122
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Frame = +1
Query: 70 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKL--------FVGGLSWE 222
NN+N D +DN + N++N ++ D+N+ R D ++ ++ GL+WE
Sbjct: 613 NNNNNNNDNNSDNNSDNNSDNNSDNNSDNNNDNNSERGADPEIKRGKNPEGWIRGLNWE 671
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 70 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 189
NNDN + + +N N N N ++ D+NS + D
Sbjct: 597 NNDNNSDNNNNNNNNNNNNNNNNDNNSDNNSDNNSDNNSD 636
>SB_38604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +1
Query: 73 NDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHF 252
+DN D + N + +GG D D++S E DRK W + +
Sbjct: 117 DDNGEDDYDGNGDNNNDDNDGGDDDNDYDSNETMAFKKDRK------GWNNNGDDNENDT 170
Query: 253 GAYGEIESINVK 288
GE + +++K
Sbjct: 171 NTTGECDDVHIK 182
>SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 70 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 189
NN+N + +N N N N ++ D NS E DDD
Sbjct: 18 NNNNNNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDDDDDD 57
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 460 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
+ +D+++R+ F FG I V++ D + KG+ ++ F
Sbjct: 63 DFNDEDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKF 101
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 29.5 bits (63), Expect = 2.5
Identities = 25/113 (22%), Positives = 47/113 (41%)
Frame = +1
Query: 130 NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR 309
+GG S ++ + P ++L V + + D +LR FG++G I + + + G
Sbjct: 53 DGGSPSAENGDSSGP-----KRLHVTNIPFRFRDNDLRQMFGSFGVIADVEIIYN-ERGS 106
Query: 310 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEIS 468
F P ++ ++ G T N + KA+ + V G E+S
Sbjct: 107 KHAVRFPTRPNPLNL-RIEGFGFVTFNT-AAEANKAREKLNGTIVDGRKVEVS 157
>SB_8368| Best HMM Match : VWA (HMM E-Value=0)
Length = 771
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 196 LFVGGLSWETTDKELRDHFGAY--GEIESINVKTDPNTGR-SRGFAFIVFKAPESIDKVM 366
LF + +TD ++ HF Y E+ ++N+K D + R RG FI S +K+
Sbjct: 167 LFYARIVMYSTDASVKMHFNKYSGAEMNNVNIKRDIDELRLERGLTFIDKALKISAEKLF 226
Query: 367 A-AGEHTINNKKV 402
+N KKV
Sbjct: 227 TEKNGMRLNRKKV 239
>SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 70 NNDNFAQDITTDNQLNGNAE-NGGGDSQDHNS 162
NND+ D T D+ N N + NGGG D+N+
Sbjct: 193 NNDDDDDDDTDDDDHNNNDDDNGGGGDDDNNN 224
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 73 NDNFAQDITTDNQLN-GNAENGGGDSQDHNS 162
+DNF DI+ D LN G A N + ++NS
Sbjct: 335 HDNFNDDISNDGNLNGGGANNNNNKNNNYNS 365
>SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05)
Length = 410
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 151 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGE 267
DH AP +L V GL WE D++L YGE
Sbjct: 69 DHLLQVAPAEVSRARLQVHGLPWEVPDEDLVALLSPYGE 107
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +1
Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 366
+LFVG LS ET ++L + F YG++ ++KT + FI ++ P ++ M
Sbjct: 7 QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKT--------AYGFIEYEDPRDAEEAM 56
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 70 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 189
NN+N +I +N N N N ++ ++N+ + DDD
Sbjct: 112 NNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNDDDDDDDD 151
>SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2)
Length = 244
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 67 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 189
A N+ +A+ +T +N N N N ++ ++N+ DDD
Sbjct: 160 AINEKYAKIMTDNNNNNNNNNNNNNNNNNNNNNNNNNNDDD 200
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 28.7 bits (61), Expect = 4.4
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Frame = +1
Query: 151 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFG------AYGEI---ESINVKTDP-N 300
D N ++K+FV + +E+ + L+DH A+ EI E KT P +
Sbjct: 80 DTNRRSRSSGAPEKKVFVSNIPFESRWQNLKDHMNKVVGDVAFAEIFEDEKGRSKTRPED 139
Query: 301 TGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH---GKIFVGGLSSEISD 471
R A +S+ G ++ N +P K+ +FV L +++
Sbjct: 140 ENRMHRSRLRGNSASQSVGGT-GGGLPSLLNLSTNPMMKKSNDPAASTVFVTNLDYKVNW 198
Query: 472 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 582
++++ F G ++ E+ D K + KG + FE+
Sbjct: 199 QKLKDTFKCAGHVIRAEIMEDDEK-KSKGMGTVQFET 234
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 130 NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 291
NGG + D + A R++ +LFV GL E ++ +LR+ + I+ + +KT
Sbjct: 603 NGGKSTDDASDAAYELRNEGVELFVVGLGDENSEAQLRE-IASVPVIDHVFMKT 655
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +1
Query: 67 ANNDNFAQDITTDNQLNGNAENGGGD-SQDHNSAEAPGRDDDRKLFVGGLSWETTDKELR 243
+N+DN D +T N N N EN D S +NS + DD K + +D
Sbjct: 289 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNS 346
Query: 244 DHFGAYGEIESINVKTDPNTGRS 312
D+ + +PNT S
Sbjct: 347 DNSTSDNSNPDNLTSDNPNTDNS 369
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 67 ANNDNFAQDITTDNQLNGNAENGGGD-SQDHNSAEAPGRDDDRK 195
+N+DN D +T N N N EN D S +NS + DD K
Sbjct: 103 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSDDSK 144
>SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 70 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 189
++DN D DN NG+ ++ D D + +A DDD
Sbjct: 61 DSDNNYDDNDDDNDDNGDDDDNDDDDDDDDDDDADDDDDD 100
>SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19)
Length = 486
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 151 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 285
D + EA R++ R ++VG +S ET ++ F YG IE + V
Sbjct: 358 DRSFREA-SREERRIVYVGKISDETHKDDVWRRFRKYGPIEKVTV 401
>SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 76 DNFAQDITTDNQLNGNAENGG-GDSQDHNSAEAPGRDDD 189
D + D D+ + + +N G GD D+ AE G DDD
Sbjct: 821 DYYYDDDDDDDDDDDDGDNDGDGDGDDYGDAENYGEDDD 859
>SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37)
Length = 599
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/30 (30%), Positives = 22/30 (73%)
Frame = +1
Query: 73 NDNFAQDITTDNQLNGNAENGGGDSQDHNS 162
ND+ A D++ ++ + G+ +NGG D+ ++++
Sbjct: 180 NDDSASDVSIEDIIYGDDDNGGDDNDNYDN 209
>SB_1422| Best HMM Match : Synaphin (HMM E-Value=7.3)
Length = 263
Score = 28.3 bits (60), Expect = 5.8
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
Frame = +1
Query: 328 IVFKAPESIDKVMAAGEHTIN--NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEF 501
+V K DK +AA H I + ++P K K KI L I ++ I+ ++
Sbjct: 87 VVGKDQAEHDKRLAAVLHRITEIDMTLNPDKCKFSEKKIEY--LGQVIDNEGIKKNPAKV 144
Query: 502 GTILEVEMPFDKTK--------NQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 645
I+++++P D NQ FC E Q + DLLK + GK D
Sbjct: 145 KAIVDMDVPRDIPSLRRFLGMVNQLMKFCPNLAEKTQPLRDLLKKNSAWVWGKAQD 200
>SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 192 SVVIASWGLSTVMILRITATVLCISIKLV 106
++++ S G++ L ITAT+LC SI L+
Sbjct: 267 TILLESSGVTLPKALHITATILCYSISLL 295
>SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017)
Length = 691
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 70 NNDNFAQDITTDNQLNGNAENGGGDSQD 153
+++++A D DN +NG+ ++GGGD D
Sbjct: 585 DDEDYAGD--GDNDVNGDGDSGGGDDDD 610
>SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5)
Length = 752
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 145 SQDHNSAEAPGRDD-DRKLFVGGLSWETTDKELRDHFGAYGEI 270
S DHN +PG DD +R++ L ++ + E+R Y EI
Sbjct: 113 SPDHNDLTSPGHDDNEREVIQDSLPIDSPENEVRLAAVLYTEI 155
>SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +1
Query: 190 RKLFVGGLSWETTDKELRDHFG--AYGEIES---INVKTDPNTGRSRGFAFIVFKAPESI 354
++ +VG LS + T ++L HFG A + S + + + +G+S GF F+ P+ +
Sbjct: 5 KRFYVGNLSVKATREDLSHHFGLDATPYLRSSCWVELAVE-KSGKSLGFGFV--NVPKHL 61
Query: 355 -DKVMAAGEHTINNKKVDPKKAKAR 426
D +M + + +K++ + A+ +
Sbjct: 62 ADHLMHLNQTKLFDKRITIEPARGK 86
>SB_34393| Best HMM Match : RVT_1 (HMM E-Value=2e-36)
Length = 1198
Score = 27.9 bits (59), Expect = 7.7
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 10/116 (8%)
Frame = +1
Query: 328 IVFKAPESIDKVMAAGEHTINN--KKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEF 501
+V K DK +AA H I ++P K K KI L I ++ I+ ++
Sbjct: 423 VVGKDQAEHDKRLAAVLHRITEIGMTLNPDKCKFSEKKIEY--LGQVIDNEGIKKNPAKV 480
Query: 502 GTILEVEMPFDKTK--------NQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 645
I+++++P D NQ FC E Q + DLLK + GK D
Sbjct: 481 KAIVDMDVPRDIPSLRRFLGMVNQLMKFCPNLAERTQPLRDLLKKNSALVWGKAQD 536
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 70 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 189
+N+N +DI N EN GG+S + N + DD+
Sbjct: 147 SNNNEDEDIQEVEDDNEGKENDGGESDEENDDDDEDGDDE 186
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 70 NNDNFAQDITTDNQLNGN--AENGGGDSQDHN 159
NNDN+ + DN N N NG DS D+N
Sbjct: 90 NNDNYDNNGNNDNNDNYNNYDNNGNNDSNDNN 121
>SB_1065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 27.9 bits (59), Expect = 7.7
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +1
Query: 79 NFAQDITTDNQLNGNAENGGGDSQDHNSAE-APGRDDDRKLFVGGLSWETTDKELRDHFG 255
N+ DI D+ N N +N D DH E DDD + + + T ++ RD
Sbjct: 51 NYDDDIDDDDYDNDN-DNYDDDDDDHKYEEDDDDDDDDDDMMMVMMMIHTGHQQHRDRQE 109
Query: 256 AYGEIESINVKTDPNTGRS 312
+G E N D N +
Sbjct: 110 DHGVQEDPNNDNDNNNNNN 128
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.134 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,891,708
Number of Sequences: 59808
Number of extensions: 437473
Number of successful extensions: 2366
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2172
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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