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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0054
         (658 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084197-11|AAM44397.1|  305|Caenorhabditis elegans Homologous t...   157   9e-39
AC084197-10|AAY43984.1|  308|Caenorhabditis elegans Homologous t...   157   9e-39
Z35601-1|CAA84667.2|  320|Caenorhabditis elegans Hypothetical pr...   142   3e-34
AB036738-1|BAB13470.1|  320|Caenorhabditis elegans neural RNA-bi...   142   3e-34
D10877-1|BAA01645.1|  346|Caenorhabditis elegans hnRNP like prot...   116   1e-26
AF038613-6|ABB51186.1|  347|Caenorhabditis elegans Human hnrnp a...   116   1e-26
AF038613-5|AAB92051.1|  346|Caenorhabditis elegans Human hnrnp a...   116   1e-26
AF038613-8|AAL02515.2|  309|Caenorhabditis elegans Human hnrnp a...    94   9e-20
AF038613-7|ABB51185.1|  308|Caenorhabditis elegans Human hnrnp a...    94   9e-20
AF098501-6|AAL38960.1|  315|Caenorhabditis elegans Hypothetical ...    77   1e-14
AF098501-5|AAM69104.1|  335|Caenorhabditis elegans Hypothetical ...    77   1e-14
AF098501-4|AAL38959.1|  336|Caenorhabditis elegans Hypothetical ...    77   1e-14
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    64   8e-11
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    64   8e-11
U24123-1|AAA65224.1|  646|Caenorhabditis elegans polyadenylate-b...    64   8e-11
AL032631-2|CAA21572.1|  646|Caenorhabditis elegans Hypothetical ...    64   8e-11
U80455-1|AAB37881.1|  584|Caenorhabditis elegans Elav-type rna b...    61   8e-10
U53931-1|AAA98566.1|  584|Caenorhabditis elegans elav-type ribon...    61   8e-10
EF523770-1|ABS18836.1|  513|Caenorhabditis elegans ELAV-type RNA...    61   8e-10
EF523769-1|ABS18835.1|  327|Caenorhabditis elegans ELAV-type RNA...    61   8e-10
EF523768-1|ABS18834.1|  378|Caenorhabditis elegans ELAV-type RNA...    61   8e-10
EF523766-1|ABS18832.1|  584|Caenorhabditis elegans ELAV-type RNA...    61   8e-10
Z73102-13|CAA97405.1|  836|Caenorhabditis elegans Hypothetical p...    60   1e-09
Z49910-5|CAA90120.1|  411|Caenorhabditis elegans Hypothetical pr...    60   1e-09
Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical pr...    59   2e-09
Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical pr...    59   2e-09
AF047662-1|AAC04442.1|  248|Caenorhabditis elegans Suppressor pr...    59   2e-09
Z77654-1|CAB01127.1|  114|Caenorhabditis elegans Hypothetical pr...    58   5e-09
AF038623-4|AAO91699.1|  177|Caenorhabditis elegans Hypothetical ...    58   5e-09
AF067616-7|AAM98029.1|  423|Caenorhabditis elegans Hypothetical ...    57   1e-08
AF067616-6|AAC19192.1|  520|Caenorhabditis elegans Hypothetical ...    57   1e-08
AF067616-5|AAU05574.1|  497|Caenorhabditis elegans Hypothetical ...    57   1e-08
Z81037-3|CAB02750.1|  205|Caenorhabditis elegans Hypothetical pr...    56   2e-08
Z36752-6|CAA85327.1|  456|Caenorhabditis elegans Hypothetical pr...    56   2e-08
U28944-5|AAK68191.1|  408|Caenorhabditis elegans Hypothetical pr...    56   3e-08
EF523767-1|ABS18833.1|  193|Caenorhabditis elegans ELAV-type RNA...    56   3e-08
AC024791-23|AAM81102.1|  346|Caenorhabditis elegans Rnp (rrm rna...    56   3e-08
AC024791-22|AAF60676.1|  339|Caenorhabditis elegans Rnp (rrm rna...    56   3e-08
AC024791-21|AAF60666.1|  749|Caenorhabditis elegans Rnp (rrm rna...    56   3e-08
Z81473-3|CAB03896.4|  514|Caenorhabditis elegans Hypothetical pr...    54   7e-08
AY342388-1|AAQ19851.1|  514|Caenorhabditis elegans putative RNA-...    54   7e-08
Z68297-5|CAC70081.1|  394|Caenorhabditis elegans Hypothetical pr...    54   9e-08
U28944-7|AAN63457.1|  295|Caenorhabditis elegans Hypothetical pr...    52   3e-07
U28944-6|AAN63456.1|  305|Caenorhabditis elegans Hypothetical pr...    52   3e-07
U28944-4|AAK68192.1|  376|Caenorhabditis elegans Hypothetical pr...    52   3e-07
U23450-2|AAK31468.1|  302|Caenorhabditis elegans Hypothetical pr...    52   3e-07
Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical pr...    52   4e-07
AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical ...    52   4e-07
AJ297847-1|CAC16732.1|  619|Caenorhabditis elegans FOG-1 protein...    52   5e-07
AJ297846-1|CAC16731.1|  619|Caenorhabditis elegans FOG-1 protein...    52   5e-07
AC024826-10|AAM97977.1|  435|Caenorhabditis elegans Hypothetical...    52   5e-07
AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical ...    52   5e-07
AC024810-12|AAK68519.1|  619|Caenorhabditis elegans Feminization...    52   5e-07
Z78536-3|CAB01717.2|  360|Caenorhabditis elegans Hypothetical pr...    51   6e-07
U21320-5|AAA62536.2|  332|Caenorhabditis elegans Rnp (rrm rna bi...    51   8e-07
Z81108-1|CAB03236.1|   83|Caenorhabditis elegans Hypothetical pr...    49   3e-06
Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical pr...    48   6e-06
AL110485-8|CAB60356.1|  434|Caenorhabditis elegans Hypothetical ...    48   6e-06
U39997-3|AAK68389.1|  498|Caenorhabditis elegans Human daz (dele...    47   1e-05
AB025253-1|BAA88577.1|  499|Caenorhabditis elegans DAZ-1 protein.      47   1e-05
Z81106-3|CAB03222.1|   84|Caenorhabditis elegans Hypothetical pr...    47   1e-05
AC024810-13|AAK68518.1|  405|Caenorhabditis elegans Feminization...    47   1e-05
AL032631-4|CAE54917.1|  586|Caenorhabditis elegans Hypothetical ...    46   2e-05
AL032631-3|CAE54916.1|  583|Caenorhabditis elegans Hypothetical ...    46   2e-05
Z81108-4|CAB03237.1|   85|Caenorhabditis elegans Hypothetical pr...    45   4e-05
AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical...    44   7e-05
AL117204-22|CAB55151.1|  331|Caenorhabditis elegans Hypothetical...    44   7e-05
AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.        44   7e-05
Z50044-2|CAA90354.1|  256|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z83127-4|CAB05631.1|  872|Caenorhabditis elegans Hypothetical pr...    43   2e-04
U23484-3|AAK68298.1|  126|Caenorhabditis elegans Sr protein (spl...    43   2e-04
U23484-2|AAC46767.1|  196|Caenorhabditis elegans Sr protein (spl...    43   2e-04
U23484-11|AAC46764.2|  191|Caenorhabditis elegans Hypothetical p...    42   3e-04
Z50874-3|CAA90773.1|  409|Caenorhabditis elegans Hypothetical pr...    42   5e-04
Z50874-2|CAA90772.1|  357|Caenorhabditis elegans Hypothetical pr...    42   5e-04
Z32683-11|CAA83626.1|  142|Caenorhabditis elegans Hypothetical p...    42   5e-04
U55363-5|AAA97963.1|  351|Caenorhabditis elegans Spindle orienta...    42   5e-04
AB052819-1|BAC65239.1|  351|Caenorhabditis elegans PIP-1 protein.      42   5e-04
AF003141-14|AAM48549.1|  362|Caenorhabditis elegans Hypothetical...    41   7e-04
AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical...    41   7e-04
U23484-10|AAC46772.1|  197|Caenorhabditis elegans Hypothetical p...    41   9e-04
AC024818-2|AAF60781.1|  302|Caenorhabditis elegans Temporarily a...    40   0.002
U79157-1|AAC26982.1|  496|Caenorhabditis elegans splicing factor...    39   0.003
AC024875-3|AAK29989.1|  496|Caenorhabditis elegans U2af splicing...    39   0.003
AC024875-2|AAM44400.1|  471|Caenorhabditis elegans U2af splicing...    39   0.003
AC024875-1|AAL00879.1|  474|Caenorhabditis elegans U2af splicing...    39   0.003
U23484-7|ABB88232.1|  738|Caenorhabditis elegans Hypothetical pr...    39   0.004
AF040642-5|AAN73870.2|  138|Caenorhabditis elegans Hypothetical ...    37   0.011
AF003145-3|AAB57717.1|  751|Caenorhabditis elegans Cpeb polya bi...    37   0.011
Z78419-2|CAB01702.1|  154|Caenorhabditis elegans Hypothetical pr...    37   0.014
Z19154-9|CAA79552.2|  559|Caenorhabditis elegans Hypothetical pr...    37   0.014
AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical ...    37   0.014
U23450-1|AAK31467.2|  422|Caenorhabditis elegans Cpeb polya bind...    36   0.025
U23172-15|AAN63408.1|  374|Caenorhabditis elegans Hypothetical p...    36   0.025
U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical p...    36   0.025
Z69384-5|CAA93419.2|  408|Caenorhabditis elegans Hypothetical pr...    36   0.033
Z97628-2|CAB10726.2|  427|Caenorhabditis elegans Hypothetical pr...    35   0.044
Z81080-5|CAB03088.2|  427|Caenorhabditis elegans Hypothetical pr...    35   0.044
Z81080-2|CAD56584.1|  358|Caenorhabditis elegans Hypothetical pr...    35   0.044
Z36238-3|CAA85276.1|  404|Caenorhabditis elegans Hypothetical pr...    35   0.058
DQ485531-1|ABF22491.1|  404|Caenorhabditis elegans RNA-binding p...    35   0.058
Z66521-4|CAD59160.1|  150|Caenorhabditis elegans Hypothetical pr...    34   0.077
Z66521-3|CAD59159.1|  148|Caenorhabditis elegans Hypothetical pr...    34   0.077
Z66521-2|CAA91395.1|  312|Caenorhabditis elegans Hypothetical pr...    34   0.077
Z83119-2|CAB05579.2|  608|Caenorhabditis elegans Hypothetical pr...    34   0.10 
U41007-10|AAL32214.1|  118|Caenorhabditis elegans Sr protein (sp...    33   0.18 
U41007-9|AAL32213.1|  153|Caenorhabditis elegans Sr protein (spl...    33   0.18 
U41007-8|AAA82270.1|  179|Caenorhabditis elegans Sr protein (spl...    33   0.18 
Z99279-4|CAB16494.1|  121|Caenorhabditis elegans Hypothetical pr...    33   0.24 
Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical pr...    33   0.24 
Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical pr...    33   0.24 
U23172-14|AAL02495.1|  165|Caenorhabditis elegans Hypothetical p...    33   0.24 
L07144-4|AAK21440.2|  187|Caenorhabditis elegans Hypothetical pr...    32   0.41 
Z81120-1|CAB03342.1|  207|Caenorhabditis elegans Hypothetical pr...    31   0.54 
Z66521-8|CAA91394.1|  281|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z99277-2|CAB16487.1|  557|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z35663-4|CAA84724.1|  307|Caenorhabditis elegans Hypothetical pr...    30   1.3  
U28944-8|AAK68193.1|  103|Caenorhabditis elegans Hypothetical pr...    30   1.3  
L07144-9|AAK21441.1|  737|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AF003140-8|AAB54169.1|  396|Caenorhabditis elegans Hypothetical ...    30   1.7  
Z68160-1|CAA92294.2|  489|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z69634-9|CAO82013.1|  575|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z69634-8|CAA93452.4|  591|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AC024791-14|AAF60658.1|  767|Caenorhabditis elegans P300/cbp ass...    28   6.7  
AF099920-4|AAK29844.2|  363|Caenorhabditis elegans Serpentine re...    27   8.9  
AF067619-1|AAC17568.2|  368|Caenorhabditis elegans Hypothetical ...    27   8.9  
AC024746-7|AAF60403.1|  246|Caenorhabditis elegans Hypothetical ...    27   8.9  

>AC084197-11|AAM44397.1|  305|Caenorhabditis elegans Homologous to
           drosophila sqd (squid)protein protein 1, isoform a
           protein.
          Length = 305

 Score =  157 bits (380), Expect = 9e-39
 Identities = 79/187 (42%), Positives = 112/187 (59%), Gaps = 1/187 (0%)
 Frame = +1

Query: 100 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI 279
           TDN++NGNA     ++   N     G ++D+K+FVGG+S E  +++L  HF  YGE+   
Sbjct: 4   TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58

Query: 280 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFVGGLS 456
            VK D   GRSRGFAF+ F   E     +AA E TI  K V+ K AK+R   K+FVGGL 
Sbjct: 59  QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLP 118

Query: 457 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 636
           S+ S+ ++R+ F +FG + ++E PFDK    R+ F FI FE E+  +      K+T G +
Sbjct: 119 SDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTR 178

Query: 637 EVDVKRA 657
           E DVK+A
Sbjct: 179 ECDVKKA 185


>AC084197-10|AAY43984.1|  308|Caenorhabditis elegans Homologous to
           drosophila sqd (squid)protein protein 1, isoform b
           protein.
          Length = 308

 Score =  157 bits (380), Expect = 9e-39
 Identities = 79/187 (42%), Positives = 112/187 (59%), Gaps = 1/187 (0%)
 Frame = +1

Query: 100 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI 279
           TDN++NGNA     ++   N     G ++D+K+FVGG+S E  +++L  HF  YGE+   
Sbjct: 4   TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58

Query: 280 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFVGGLS 456
            VK D   GRSRGFAF+ F   E     +AA E TI  K V+ K AK+R   K+FVGGL 
Sbjct: 59  QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLP 118

Query: 457 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 636
           S+ S+ ++R+ F +FG + ++E PFDK    R+ F FI FE E+  +      K+T G +
Sbjct: 119 SDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTR 178

Query: 637 EVDVKRA 657
           E DVK+A
Sbjct: 179 ECDVKKA 185


>Z35601-1|CAA84667.2|  320|Caenorhabditis elegans Hypothetical
           protein R10E9.1 protein.
          Length = 320

 Score =  142 bits (343), Expect = 3e-34
 Identities = 66/170 (38%), Positives = 104/170 (61%), Gaps = 9/170 (5%)
 Frame = +1

Query: 175 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 354
           G  D  K+F+GGLSW+TT + LRD+FG +GE+    V  DP T R+RGF FI F  P S+
Sbjct: 40  GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99

Query: 355 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 507
           DKV+   EH ++ KK+DPK         K   +  K+F+GGLS+  + ++++ +F  +G 
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159

Query: 508 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 657
           + +  + FDK   + +GF F+TF+S++V + + +     I GK V+ K+A
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKA 209



 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = +1

Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 369
           +K+F+GGLS  +T ++++ +F  YG++E   +  D  T R RGF F+ F + E  DKV  
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193

Query: 370 AGEHTINNKKVDPKKAKAR 426
              H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212



 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 29/94 (30%), Positives = 48/94 (51%)
 Frame = +1

Query: 376 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 555
           E  +N    D        GK+F+GGLS + + + +R++F  FG + E  +  D    + +
Sbjct: 27  EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86

Query: 556 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 657
           GF FITF     V+ +L   +  + GK++D K A
Sbjct: 87  GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVA 120


>AB036738-1|BAB13470.1|  320|Caenorhabditis elegans neural
           RNA-binding protein MSI-1 protein.
          Length = 320

 Score =  142 bits (343), Expect = 3e-34
 Identities = 66/170 (38%), Positives = 104/170 (61%), Gaps = 9/170 (5%)
 Frame = +1

Query: 175 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 354
           G  D  K+F+GGLSW+TT + LRD+FG +GE+    V  DP T R+RGF FI F  P S+
Sbjct: 40  GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99

Query: 355 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 507
           DKV+   EH ++ KK+DPK         K   +  K+F+GGLS+  + ++++ +F  +G 
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159

Query: 508 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 657
           + +  + FDK   + +GF F+TF+S++V + + +     I GK V+ K+A
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKA 209



 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = +1

Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 369
           +K+F+GGLS  +T ++++ +F  YG++E   +  D  T R RGF F+ F + E  DKV  
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193

Query: 370 AGEHTINNKKVDPKKAKAR 426
              H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212



 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 29/94 (30%), Positives = 48/94 (51%)
 Frame = +1

Query: 376 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 555
           E  +N    D        GK+F+GGLS + + + +R++F  FG + E  +  D    + +
Sbjct: 27  EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86

Query: 556 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 657
           GF FITF     V+ +L   +  + GK++D K A
Sbjct: 87  GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVA 120


>D10877-1|BAA01645.1|  346|Caenorhabditis elegans hnRNP like protein
           protein.
          Length = 346

 Score =  116 bits (279), Expect = 1e-26
 Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
 Frame = +1

Query: 124 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 303
           AENG GD+    S E    ++ RK+FVGGL+  TTD  +R+ +  +GEI  I V  DP T
Sbjct: 8   AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60

Query: 304 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGG 450
            RSRGF F+ F     +D  M    H I+ K VDPK+A  R  K           ++V G
Sbjct: 61  KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120

Query: 451 LSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIG 630
           +  + ++D +  +F+++GT+ + E+  DK   + +GF F+TF+    V+  +      + 
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVN 180

Query: 631 GKEVDVKR 654
           G   DV++
Sbjct: 181 GHRCDVRK 188



 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 33/75 (44%), Positives = 47/75 (62%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 612
           KIFVGGL+S  +DD +R F+S+FG I ++ +  D T  + +GF F+TF  +  V+  +K 
Sbjct: 24  KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83

Query: 613 PKRTIGGKEVDVKRA 657
               I GK VD KRA
Sbjct: 84  RPHIIDGKTVDPKRA 98



 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 21/79 (26%), Positives = 42/79 (53%)
 Frame = +1

Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 369
           ++L+V G+  + T+  L ++F  YG +    +  D  T + RGF F+ F   +S+D+ + 
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173

Query: 370 AGEHTINNKKVDPKKAKAR 426
              H +N  + D +K  ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192


>AF038613-6|ABB51186.1|  347|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform d protein.
          Length = 347

 Score =  116 bits (279), Expect = 1e-26
 Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
 Frame = +1

Query: 124 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 303
           AENG GD+    S E    ++ RK+FVGGL+  TTD  +R+ +  +GEI  I V  DP T
Sbjct: 8   AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60

Query: 304 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGG 450
            RSRGF F+ F     +D  M    H I+ K VDPK+A  R  K           ++V G
Sbjct: 61  KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120

Query: 451 LSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIG 630
           +  + ++D +  +F+++GT+ + E+  DK   + +GF F+TF+    V+  +      + 
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVN 180

Query: 631 GKEVDVKR 654
           G   DV++
Sbjct: 181 GHRCDVRK 188



 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 33/75 (44%), Positives = 47/75 (62%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 612
           KIFVGGL+S  +DD +R F+S+FG I ++ +  D T  + +GF F+TF  +  V+  +K 
Sbjct: 24  KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83

Query: 613 PKRTIGGKEVDVKRA 657
               I GK VD KRA
Sbjct: 84  RPHIIDGKTVDPKRA 98



 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 21/79 (26%), Positives = 42/79 (53%)
 Frame = +1

Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 369
           ++L+V G+  + T+  L ++F  YG +    +  D  T + RGF F+ F   +S+D+ + 
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173

Query: 370 AGEHTINNKKVDPKKAKAR 426
              H +N  + D +K  ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192


>AF038613-5|AAB92051.1|  346|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform a protein.
          Length = 346

 Score =  116 bits (279), Expect = 1e-26
 Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
 Frame = +1

Query: 124 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 303
           AENG GD+    S E    ++ RK+FVGGL+  TTD  +R+ +  +GEI  I V  DP T
Sbjct: 8   AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60

Query: 304 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGG 450
            RSRGF F+ F     +D  M    H I+ K VDPK+A  R  K           ++V G
Sbjct: 61  KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120

Query: 451 LSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIG 630
           +  + ++D +  +F+++GT+ + E+  DK   + +GF F+TF+    V+  +      + 
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVN 180

Query: 631 GKEVDVKR 654
           G   DV++
Sbjct: 181 GHRCDVRK 188



 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 33/75 (44%), Positives = 47/75 (62%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 612
           KIFVGGL+S  +DD +R F+S+FG I ++ +  D T  + +GF F+TF  +  V+  +K 
Sbjct: 24  KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83

Query: 613 PKRTIGGKEVDVKRA 657
               I GK VD KRA
Sbjct: 84  RPHIIDGKTVDPKRA 98



 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 21/79 (26%), Positives = 42/79 (53%)
 Frame = +1

Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 369
           ++L+V G+  + T+  L ++F  YG +    +  D  T + RGF F+ F   +S+D+ + 
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173

Query: 370 AGEHTINNKKVDPKKAKAR 426
              H +N  + D +K  ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192


>AF038613-8|AAL02515.2|  309|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform b protein.
          Length = 309

 Score = 93.9 bits (223), Expect = 9e-20
 Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
 Frame = +1

Query: 238 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 417
           +R+ +  +GEI  I V  DP T RSRGF F+ F     +D  M    H I+ K VDPK+A
Sbjct: 1   MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60

Query: 418 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 564
             R  K           ++V G+  + ++D +  +F+++GT+ + E+  DK   + +GF 
Sbjct: 61  VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120

Query: 565 FITFESEQVVNDLLKTPKRTIGGKEVDVKR 654
           F+TF+    V+  +      + G   DV++
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 150



 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 21/79 (26%), Positives = 42/79 (53%)
 Frame = +1

Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 369
           ++L+V G+  + T+  L ++F  YG +    +  D  T + RGF F+ F   +S+D+ + 
Sbjct: 76  KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135

Query: 370 AGEHTINNKKVDPKKAKAR 426
              H +N  + D +K  ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154



 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 23/60 (38%), Positives = 35/60 (58%)
 Frame = +1

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 657
           +R F+S+FG I ++ +  D T  + +GF F+TF  +  V+  +K     I GK VD KRA
Sbjct: 1   MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60


>AF038613-7|ABB51185.1|  308|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform c protein.
          Length = 308

 Score = 93.9 bits (223), Expect = 9e-20
 Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
 Frame = +1

Query: 238 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 417
           +R+ +  +GEI  I V  DP T RSRGF F+ F     +D  M    H I+ K VDPK+A
Sbjct: 1   MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60

Query: 418 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 564
             R  K           ++V G+  + ++D +  +F+++GT+ + E+  DK   + +GF 
Sbjct: 61  VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120

Query: 565 FITFESEQVVNDLLKTPKRTIGGKEVDVKR 654
           F+TF+    V+  +      + G   DV++
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 150



 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 21/79 (26%), Positives = 42/79 (53%)
 Frame = +1

Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 369
           ++L+V G+  + T+  L ++F  YG +    +  D  T + RGF F+ F   +S+D+ + 
Sbjct: 76  KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135

Query: 370 AGEHTINNKKVDPKKAKAR 426
              H +N  + D +K  ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154



 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 23/60 (38%), Positives = 35/60 (58%)
 Frame = +1

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 657
           +R F+S+FG I ++ +  D T  + +GF F+TF  +  V+  +K     I GK VD KRA
Sbjct: 1   MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60


>AF098501-6|AAL38960.1|  315|Caenorhabditis elegans Hypothetical
           protein H28G03.1b protein.
          Length = 315

 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
 Frame = +1

Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 369
           RKLF+GGLS +TTD++L ++F  +G +    V  DPNT  SRGF F+ F +  S +  M 
Sbjct: 49  RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108

Query: 370 AGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFF 492
              H +  K VD K+A  R                    K+ + G+++ + S D +R +F
Sbjct: 109 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 168

Query: 493 SEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVK 651
             FGT+ +VE+       Q +G  F+ +E ++  +  L   + +  +  ++++V+
Sbjct: 169 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVR 218



 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 26/75 (34%), Positives = 44/75 (58%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 612
           K+F+GGLS + +D+++ N+FS++G +++  +  D      +GF F+TF S       +  
Sbjct: 50  KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109

Query: 613 PKRTIGGKEVDVKRA 657
               +GGK VD KRA
Sbjct: 110 RPHKLGGKTVDSKRA 124


>AF098501-5|AAM69104.1|  335|Caenorhabditis elegans Hypothetical
           protein H28G03.1c protein.
          Length = 335

 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
 Frame = +1

Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 369
           RKLF+GGLS +TTD++L ++F  +G +    V  DPNT  SRGF F+ F +  S +  M 
Sbjct: 69  RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128

Query: 370 AGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFF 492
              H +  K VD K+A  R                    K+ + G+++ + S D +R +F
Sbjct: 129 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 188

Query: 493 SEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVK 651
             FGT+ +VE+       Q +G  F+ +E ++  +  L   + +  +  ++++V+
Sbjct: 189 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVR 238



 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 26/75 (34%), Positives = 44/75 (58%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 612
           K+F+GGLS + +D+++ N+FS++G +++  +  D      +GF F+TF S       +  
Sbjct: 70  KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129

Query: 613 PKRTIGGKEVDVKRA 657
               +GGK VD KRA
Sbjct: 130 RPHKLGGKTVDSKRA 144


>AF098501-4|AAL38959.1|  336|Caenorhabditis elegans Hypothetical
           protein H28G03.1a protein.
          Length = 336

 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
 Frame = +1

Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 369
           RKLF+GGLS +TTD++L ++F  +G +    V  DPNT  SRGF F+ F +  S +  M 
Sbjct: 70  RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129

Query: 370 AGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFF 492
              H +  K VD K+A  R                    K+ + G+++ + S D +R +F
Sbjct: 130 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 189

Query: 493 SEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVK 651
             FGT+ +VE+       Q +G  F+ +E ++  +  L   + +  +  ++++V+
Sbjct: 190 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVR 239



 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 26/75 (34%), Positives = 44/75 (58%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 612
           K+F+GGLS + +D+++ N+FS++G +++  +  D      +GF F+TF S       +  
Sbjct: 71  KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130

Query: 613 PKRTIGGKEVDVKRA 657
               +GGK VD KRA
Sbjct: 131 RPHKLGGKTVDSKRA 145


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 64.1 bits (149), Expect = 8e-11
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
 Frame = +1

Query: 178 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 357
           R+ D  ++VGGL  + ++  L +     G + S+N+  D  T   +GF F+ F   E  D
Sbjct: 9   RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68

Query: 358 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILE 516
             +       +  K +   KA A          IFVG L  E+ +  + + FS FG IL+
Sbjct: 69  YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 128

Query: 517 V-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 609
           V ++  D      KGF FI F S +  +  L+
Sbjct: 129 VPKIMRDVDSGTSKGFAFINFASFEASDTALE 160



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +1

Query: 160 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 336
           SA     D    +FVG L  E  +K L D F A+G I  +  +  D ++G S+GFAFI F
Sbjct: 90  SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149

Query: 337 KAPESIDKVMAA 372
            + E+ D  + A
Sbjct: 150 ASFEASDTALEA 161



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 615
           I+VGGL  ++S+  +     + G ++ V MP D+     +GF F+ F  E+  +  +K  
Sbjct: 15  IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74

Query: 616 KR-TIGGKEVDVKRA 657
               + GK + V +A
Sbjct: 75  NMIKLYGKPIKVNKA 89


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 64.1 bits (149), Expect = 8e-11
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
 Frame = +1

Query: 178 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 357
           R+ D  ++VGGL  + ++  L +     G + S+N+  D  T   +GF F+ F   E  D
Sbjct: 19  RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78

Query: 358 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILE 516
             +       +  K +   KA A          IFVG L  E+ +  + + FS FG IL+
Sbjct: 79  YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 138

Query: 517 V-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 609
           V ++  D      KGF FI F S +  +  L+
Sbjct: 139 VPKIMRDVDSGTSKGFAFINFASFEASDTALE 170



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +1

Query: 160 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 336
           SA     D    +FVG L  E  +K L D F A+G I  +  +  D ++G S+GFAFI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159

Query: 337 KAPESIDKVMAA 372
            + E+ D  + A
Sbjct: 160 ASFEASDTALEA 171



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 615
           I+VGGL  ++S+  +     + G ++ V MP D+     +GF F+ F  E+  +  +K  
Sbjct: 25  IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84

Query: 616 KR-TIGGKEVDVKRA 657
               + GK + V +A
Sbjct: 85  NMIKLYGKPIKVNKA 99


>U24123-1|AAA65224.1|  646|Caenorhabditis elegans
           polyadenylate-binding protein protein.
          Length = 646

 Score = 64.1 bits (149), Expect = 8e-11
 Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 372
           L+VG L  +  +  L + F A G + SI V  D  T  S G+A++ F+ P   ++ M   
Sbjct: 34  LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93

Query: 373 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 531
               ++ K +       DP   ++  G IF+  L   I +  I + FS FG IL  ++  
Sbjct: 94  NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153

Query: 532 DKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDV 648
           D+     KG+ F+ FE+E+   N + K     + GK+V V
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 25/66 (37%), Positives = 34/66 (51%)
 Frame = +1

Query: 151 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 330
           + + AE   +     L+V  L     D  L+  F +YG I S  V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362

Query: 331 VFKAPE 348
            F+ PE
Sbjct: 363 CFEKPE 368



 Score = 37.1 bits (82), Expect = 0.011
 Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
 Frame = +1

Query: 250 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 390
           F  +G I S  V T    G+S+GF F+ F  PE  +  V A  + TI             
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290

Query: 391 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 531
                     KK +  KA    K +   ++V  L   + DD ++  F  +G I   ++  
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350

Query: 532 DKTKNQRKGFCFITFESEQ 588
           D+   + KGF F+ FE  +
Sbjct: 351 DE-NGRSKGFGFVCFEKPE 368


>AL032631-2|CAA21572.1|  646|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2a protein.
          Length = 646

 Score = 64.1 bits (149), Expect = 8e-11
 Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 372
           L+VG L  +  +  L + F A G + SI V  D  T  S G+A++ F+ P   ++ M   
Sbjct: 34  LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93

Query: 373 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 531
               ++ K +       DP   ++  G IF+  L   I +  I + FS FG IL  ++  
Sbjct: 94  NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153

Query: 532 DKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDV 648
           D+     KG+ F+ FE+E+   N + K     + GK+V V
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 25/66 (37%), Positives = 34/66 (51%)
 Frame = +1

Query: 151 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 330
           + + AE   +     L+V  L     D  L+  F +YG I S  V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362

Query: 331 VFKAPE 348
            F+ PE
Sbjct: 363 CFEKPE 368



 Score = 37.1 bits (82), Expect = 0.011
 Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
 Frame = +1

Query: 250 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 390
           F  +G I S  V T    G+S+GF F+ F  PE  +  V A  + TI             
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290

Query: 391 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 531
                     KK +  KA    K +   ++V  L   + DD ++  F  +G I   ++  
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350

Query: 532 DKTKNQRKGFCFITFESEQ 588
           D+   + KGF F+ FE  +
Sbjct: 351 DE-NGRSKGFGFVCFEKPE 368


>U80455-1|AAB37881.1|  584|Caenorhabditis elegans Elav-type rna
           binding protein familyprotein 1, isoform a protein.
          Length = 584

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
 Frame = +1

Query: 151 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 324
           D++ + +P   D    K+FVG +  +  + + R  F  YG + S N+  D +T  S+G  
Sbjct: 40  DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99

Query: 325 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 477
           F+ F    ++I+        KV+    H +  K  D +    R  K+F+G LS + +++ 
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
           +R  F++FG I +  +  D+    R G  F+TF
Sbjct: 158 LREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189


>U53931-1|AAA98566.1|  584|Caenorhabditis elegans elav-type
           ribonucleoprotein protein.
          Length = 584

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
 Frame = +1

Query: 151 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 324
           D++ + +P   D    K+FVG +  +  + + R  F  YG + S N+  D +T  S+G  
Sbjct: 40  DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99

Query: 325 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 477
           F+ F    ++I+        KV+    H +  K  D +    R  K+F+G LS + +++ 
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
           +R  F++FG I +  +  D+    R G  F+TF
Sbjct: 158 LREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189


>EF523770-1|ABS18836.1|  513|Caenorhabditis elegans ELAV-type RNA
           binding protein variantE protein.
          Length = 513

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
 Frame = +1

Query: 151 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 324
           D++ + +P   D    K+FVG +  +  + + R  F  YG + S N+  D +T  S+G  
Sbjct: 40  DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99

Query: 325 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 477
           F+ F    ++I+        KV+    H +  K  D +    R  K+F+G LS + +++ 
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
           +R  F++FG I +  +  D+    R G  F+TF
Sbjct: 158 LREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189


>EF523769-1|ABS18835.1|  327|Caenorhabditis elegans ELAV-type RNA
           binding protein variantD protein.
          Length = 327

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
 Frame = +1

Query: 151 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 324
           D++ + +P   D    K+FVG +  +  + + R  F  YG + S N+  D +T  S+G  
Sbjct: 40  DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99

Query: 325 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 477
           F+ F    ++I+        KV+    H +  K  D +    R  K+F+G LS + +++ 
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
           +R  F++FG I +  +  D+    R G  F+TF
Sbjct: 158 LREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189


>EF523768-1|ABS18834.1|  378|Caenorhabditis elegans ELAV-type RNA
           binding protein variantC protein.
          Length = 378

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
 Frame = +1

Query: 151 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 324
           D++ + +P   D    K+FVG +  +  + + R  F  YG + S N+  D +T  S+G  
Sbjct: 40  DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99

Query: 325 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 477
           F+ F    ++I+        KV+    H +  K  D +    R  K+F+G LS + +++ 
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
           +R  F++FG I +  +  D+    R G  F+TF
Sbjct: 158 LREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189


>EF523766-1|ABS18832.1|  584|Caenorhabditis elegans ELAV-type RNA
           binding protein variantA protein.
          Length = 584

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
 Frame = +1

Query: 151 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 324
           D++ + +P   D    K+FVG +  +  + + R  F  YG + S N+  D +T  S+G  
Sbjct: 40  DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99

Query: 325 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 477
           F+ F    ++I+        KV+    H +  K  D +    R  K+F+G LS + +++ 
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
           +R  F++FG I +  +  D+    R G  F+TF
Sbjct: 158 LREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189


>Z73102-13|CAA97405.1|  836|Caenorhabditis elegans Hypothetical
            protein B0035.12 protein.
          Length = 836

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
 Frame = +1

Query: 169  APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR-SRGFAFIVFKAP 345
            APG +D R +FV  L + TT+ E+R    A   + SI      N+    RGFA++V +  
Sbjct: 586  APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMEND 642

Query: 346  ESIDKVMAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLSSEISDDEIRNF 489
            +   + +      +  + +     DP+K             K+FV  +  + +DDE++  
Sbjct: 643  QKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKAL 702

Query: 490  FSEFGTILEVEMPFDKTKNQRKGFCFITFESE 585
            FS+FGT+  V     K   + KG  F+ F++E
Sbjct: 703  FSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTE 733


>Z49910-5|CAA90120.1|  411|Caenorhabditis elegans Hypothetical
           protein F44G4.4a protein.
          Length = 411

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 12/195 (6%)
 Frame = +1

Query: 109 QLNGNAENGGGDSQDHNSAEAPGRDDDRK---LFVGGLSWETTDKELRDHFGAYGEIESI 279
           ++  + ++   D +D  S      + D +   L V G+ ++TTD+  + +F   G +   
Sbjct: 143 KVGSSDDSDSDDGRDGRSGRKRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFC 202

Query: 280 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-------GKI 438
            +K   + G S+GF F+   +    +KV+A  +H I+ ++ D K    R         +I
Sbjct: 203 EIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRI 261

Query: 439 FVGGLSSEISDDEIRNFF-SEFGTILEVEMPFDK-TKNQRKGFCFITFESEQVVNDLLKT 612
           FVG L+ ++ + ++R  F  E  + +E  +  D       +GF F+T  S +    ++  
Sbjct: 262 FVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAAERIVSK 321

Query: 613 PKRTIGGKEVDVKRA 657
              T+ G  V +  A
Sbjct: 322 GSLTVNGLSVGLSIA 336



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
 Frame = +1

Query: 175 GRDDDRKLFVGGLSWETTDKELRDHFG--AYGEIESINVKTDPNTGRS-RGFAFIVFKAP 345
           GR    ++FVG L+ +  + +LR  FG  A   IE+  V TD    +  RGFAF+   + 
Sbjct: 254 GRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETA-VVTDVFIPKPFRGFAFVTLSSA 312

Query: 346 ESIDKVMAAGEHTINNKKVDPKKAKAR 426
           E+ +++++ G  T+N   V    A+ R
Sbjct: 313 EAAERIVSKGSLTVNGLSVGLSIAQPR 339


>Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical
           protein F18H3.3b protein.
          Length = 566

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 372
           L++G L  + ++  L + F   G + SI V  D  +  S G+A++ F+ P   ++ +   
Sbjct: 59  LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118

Query: 373 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 531
               I+ + +       DP   +A +G IF+  L   I +  + + FS FG IL  ++  
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178

Query: 532 DKTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIGGK 636
           D   N  KG+ F+ FE+E       + VN +L + K+   GK
Sbjct: 179 DDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 23/51 (45%), Positives = 31/51 (60%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 348
           L+V  +  +  D  LRDHF ++G I S  V  D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394



 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
 Frame = +1

Query: 169 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 348
           A  R  +  +F+  L     +K + D F  +G I S  V TD + G S+G+ F+ F+   
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196

Query: 349 S----IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRN 486
           S    I+KV  M   +  +   K  P+  + +        +  +FV      +  +++  
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256

Query: 487 FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 609
            FS+FG I    +  D  + + KGF F+ F  +      ++
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVE 296



 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 27/181 (14%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI 354
           +FV         ++L   F  +GEI S  V TD   G+ +GF F+ F       +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298

Query: 355 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 477
            D ++   +  ++  +   K  ++   K                  ++V  +  +++DD 
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKR 654
           +R+ FS FGTI   ++  D+   + KGF F+ FE  E+    +     + IG K + V  
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVAL 417

Query: 655 A 657
           A
Sbjct: 418 A 418


>Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical
           protein F18H3.3a protein.
          Length = 692

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 372
           L++G L  + ++  L + F   G + SI V  D  +  S G+A++ F+ P   ++ +   
Sbjct: 59  LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118

Query: 373 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 531
               I+ + +       DP   +A +G IF+  L   I +  + + FS FG IL  ++  
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178

Query: 532 DKTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIGGK 636
           D   N  KG+ F+ FE+E       + VN +L + K+   GK
Sbjct: 179 DDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 23/51 (45%), Positives = 31/51 (60%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 348
           L+V  +  +  D  LRDHF ++G I S  V  D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394



 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
 Frame = +1

Query: 169 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 348
           A  R  +  +F+  L     +K + D F  +G I S  V TD + G S+G+ F+ F+   
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196

Query: 349 S----IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRN 486
           S    I+KV  M   +  +   K  P+  + +        +  +FV      +  +++  
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256

Query: 487 FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 609
            FS+FG I    +  D  + + KGF F+ F  +      ++
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVE 296



 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 27/181 (14%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI 354
           +FV         ++L   F  +GEI S  V TD   G+ +GF F+ F       +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298

Query: 355 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 477
            D ++   +  ++  +   K  ++   K                  ++V  +  +++DD 
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKR 654
           +R+ FS FGTI   ++  D+   + KGF F+ FE  E+    +     + IG K + V  
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVAL 417

Query: 655 A 657
           A
Sbjct: 418 A 418


>AF047662-1|AAC04442.1|  248|Caenorhabditis elegans Suppressor
           protein 12 protein.
          Length = 248

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
 Frame = +1

Query: 145 SQDHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 318
           +Q  N+    G  D    K+FVGGL + T+DK L ++F  +G+IE   V TD NT +SRG
Sbjct: 18  AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRG 77

Query: 319 FAFIVFKAPESIDKVMAAGEHTINNKKVD 405
           + F+  K   S ++        I+ +K +
Sbjct: 78  YGFVTMKDRASAERACKDPNPIIDGRKAN 106



 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 24/75 (32%), Positives = 37/75 (49%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 612
           KIFVGGL    SD  +  +F +FG I E  +  D+   + +G+ F+T +         K 
Sbjct: 36  KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95

Query: 613 PKRTIGGKEVDVKRA 657
           P   I G++ +V  A
Sbjct: 96  PNPIIDGRKANVNLA 110


>Z77654-1|CAB01127.1|  114|Caenorhabditis elegans Hypothetical
           protein C50B8.1 protein.
          Length = 114

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 26/80 (32%), Positives = 45/80 (56%)
 Frame = +1

Query: 166 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 345
           EA  ++  + +++  + W T   +L  +F  YG I+S+N+  DP+TG  RGFA I F + 
Sbjct: 17  EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76

Query: 346 ESIDKVMAAGEHTINNKKVD 405
           +  +K +    H I+  +VD
Sbjct: 77  DGANKAIEQRPHVIDGDRVD 96



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 22/90 (24%), Positives = 41/90 (45%)
 Frame = +1

Query: 382 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 561
           T N  K+   + K     +++  +       ++ ++F  +G+I  V M +D      +GF
Sbjct: 9   TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68

Query: 562 CFITFESEQVVNDLLKTPKRTIGGKEVDVK 651
             ITF+S+   N  ++     I G  VDV+
Sbjct: 69  ASITFDSKDGANKAIEQRPHVIDGDRVDVE 98


>AF038623-4|AAO91699.1|  177|Caenorhabditis elegans Hypothetical
           protein T08B6.5 protein.
          Length = 177

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 23/81 (28%), Positives = 43/81 (53%)
 Frame = +1

Query: 160 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 339
           +AE   + D R ++VG + W++T  E+ +HF   G++  + +  D  TG  + FAF+ F+
Sbjct: 36  TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95

Query: 340 APESIDKVMAAGEHTINNKKV 402
             ES+   +        N+K+
Sbjct: 96  KLESVQLALVLSGTMFRNRKI 116


>AF067616-7|AAM98029.1|  423|Caenorhabditis elegans Hypothetical
           protein F29C4.7b protein.
          Length = 423

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
 Frame = +1

Query: 79  NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 249
           N AQ      +  G+     G      S     +DDD   R LFVG +  +  ++E+R  
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188

Query: 250 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 429
           F  +G++E +++KT  NT     +AF++F+  +    + A  E      +    + K  +
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 244

Query: 430 GK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 522
           GK      +FVGGL S    + ++  F EFG +  ++
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281



 Score = 34.7 bits (76), Expect = 0.058
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 609
           +FVG + S++ + EIR+ F E G + EV++   KT  N    + F+ F++ +Q +    +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227

Query: 610 TPKRTI--GGKEVDV 648
              R I  GG  + +
Sbjct: 228 EQDRPIRAGGSRMKI 242


>AF067616-6|AAC19192.1|  520|Caenorhabditis elegans Hypothetical
           protein F29C4.7a protein.
          Length = 520

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
 Frame = +1

Query: 79  NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 249
           N AQ      +  G+     G      S     +DDD   R LFVG +  +  ++E+R  
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188

Query: 250 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 429
           F  +G++E +++KT  NT     +AF++F+  +    + A  E      +    + K  +
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 244

Query: 430 GK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 522
           GK      +FVGGL S    + ++  F EFG +  ++
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281



 Score = 34.7 bits (76), Expect = 0.058
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 609
           +FVG + S++ + EIR+ F E G + EV++   KT  N    + F+ F++ +Q +    +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227

Query: 610 TPKRTI--GGKEVDV 648
              R I  GG  + +
Sbjct: 228 EQDRPIRAGGSRMKI 242


>AF067616-5|AAU05574.1|  497|Caenorhabditis elegans Hypothetical
           protein F29C4.7c protein.
          Length = 497

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
 Frame = +1

Query: 79  NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 249
           N AQ      +  G+     G      S     +DDD   R LFVG +  +  ++E+R  
Sbjct: 106 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 165

Query: 250 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 429
           F  +G++E +++KT  NT     +AF++F+  +    + A  E      +    + K  +
Sbjct: 166 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 221

Query: 430 GK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 522
           GK      +FVGGL S    + ++  F EFG +  ++
Sbjct: 222 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 258



 Score = 34.7 bits (76), Expect = 0.058
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 609
           +FVG + S++ + EIR+ F E G + EV++   KT  N    + F+ F++ +Q +    +
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 204

Query: 610 TPKRTI--GGKEVDV 648
              R I  GG  + +
Sbjct: 205 EQDRPIRAGGSRMKI 219


>Z81037-3|CAB02750.1|  205|Caenorhabditis elegans Hypothetical
           protein C17E4.5 protein.
          Length = 205

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
 Frame = +1

Query: 112 LNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 291
           +N N  +    SQ   + E     D + ++VG + +  T +E+  HF   G +  + ++ 
Sbjct: 52  MNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQC 111

Query: 292 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNK--KVDPKK 414
           D  +G  +GFA++ F   E +   +A  +  +  +  KVDPK+
Sbjct: 112 DRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQIKVDPKR 154



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/80 (22%), Positives = 39/80 (48%)
 Frame = +1

Query: 409 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
           +KA+A    ++VG +    + +EI   F   G++  V +  D+     KGF ++ F  ++
Sbjct: 71  EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130

Query: 589 VVNDLLKTPKRTIGGKEVDV 648
            + + L      + G+++ V
Sbjct: 131 GMQNALAMTDSLLRGRQIKV 150


>Z36752-6|CAA85327.1|  456|Caenorhabditis elegans Hypothetical
           protein F35H8.5 protein.
          Length = 456

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAA 372
           L +  L    T +E+R  F + GEIES  +  D  TG+S G+ F+ + +  +++  V + 
Sbjct: 44  LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103

Query: 373 GEHTINNKKVD-----PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 537
               + NK +      P   + +   ++V G+   ++  E+ + F  FG I+   +  D 
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDN 163

Query: 538 TKNQRKGFCFITFESEQVVNDLLKT 612
                KG  F+ F+ +   +  +KT
Sbjct: 164 VTGLSKGVGFVRFDKKDEADVAIKT 188



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 612
           +FV  LSS+  D  +   FS+FG I+ V++  D T+ Q KG+ F++  +  +  N +L  
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434

Query: 613 PKRTIGGKEVDV 648
               + GK + V
Sbjct: 435 NGTNLAGKTLQV 446


>U28944-5|AAK68191.1|  408|Caenorhabditis elegans Hypothetical
           protein C18A3.5a protein.
          Length = 408

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
 Frame = +1

Query: 175 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF------ 336
           G D+ R L+VG L    T+  +   F   G +    V  D   G +  +AF+ F      
Sbjct: 41  GSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQA 97

Query: 337 -KAPESIDKVMAAGEHTINNKKVDPKKAKA-----RHGKIFVGGLSSEISDDEIRNFFSE 498
            +A ++++K +        N  V+P + ++     RH  +FVG LSSE+ + ++R  F  
Sbjct: 98  SQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP 157

Query: 499 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
           FG + + ++  D    + KG+ F+++   +
Sbjct: 158 FGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 187



 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 369
           +FVG LS E  +++LR+ F  +G++    V  D NT +S+G+ F+ +   E  ++ +   
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196

Query: 370 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 477
                G  TI                  N K  D    +    +  ++VG ++S +++DE
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 255

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 642
           IR  F+ FG I EV +       + +G+ F+ F++ +     +++   + +GG+ V
Sbjct: 256 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 305


>EF523767-1|ABS18833.1|  193|Caenorhabditis elegans ELAV-type RNA
           binding protein variantB protein.
          Length = 193

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
 Frame = +1

Query: 151 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 324
           D++ + +P   D    K+FVG +  +  + + R  F  YG + S N+  D +T  S+G  
Sbjct: 40  DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99

Query: 325 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 477
           F+ F    ++I+        KV+    H +  K  D +    R  K+F+G LS + +++ 
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQR 552
           +R  F++FG I +  +  D+    R
Sbjct: 158 LREIFAKFGHIEDCSVLRDQDGKSR 182



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = +1

Query: 388 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 567
           N+    P +      K+FVG +  + ++ + R  F ++G++    +  DK+    KG CF
Sbjct: 41  NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100

Query: 568 ITF 576
           +TF
Sbjct: 101 VTF 103


>AC024791-23|AAM81102.1|  346|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform c protein.
          Length = 346

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 25/155 (16%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ES 351
           +++VG +S+E  +  LR  F  +G I+SIN+  DP TG  + FAF+ ++ P       ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162

Query: 352 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 477
           ++  M  G +               N  +  P     +K   ++ +++V  +  ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 582
           +++ F  FG I++ ++    T    +GF ++ F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257



 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 369
           +++V  +  + ++ +L+  F A+GEI    +   P TGR  RGF ++ F    S  + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266


>AC024791-22|AAF60676.1|  339|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform a protein.
          Length = 339

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 25/155 (16%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ES 351
           +++VG +S+E  +  LR  F  +G I+SIN+  DP TG  + FAF+ ++ P       ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162

Query: 352 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 477
           ++  M  G +               N  +  P     +K   ++ +++V  +  ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 582
           +++ F  FG I++ ++    T    +GF ++ F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257



 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 369
           +++V  +  + ++ +L+  F A+GEI    +   P TGR  RGF ++ F    S  + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266


>AC024791-21|AAF60666.1|  749|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform b protein.
          Length = 749

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 25/155 (16%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ES 351
           +++VG +S+E  +  LR  F  +G I+SIN+  DP TG  + FAF+ ++ P       ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162

Query: 352 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 477
           ++  M  G +               N  +  P     +K   ++ +++V  +  ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 582
           +++ F  FG I++ ++    T    +GF ++ F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257



 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 369
           +++V  +  + ++ +L+  F A+GEI    +   P TGR  RGF ++ F    S  + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266


>Z81473-3|CAB03896.4|  514|Caenorhabditis elegans Hypothetical
           protein C17D12.2 protein.
          Length = 514

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
 Frame = +1

Query: 172 PGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF---- 336
           P +D D  KLFVG +     +K+LR  F  +G+I    +  D  TG  +G AF+ +    
Sbjct: 22  PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81

Query: 337 ------------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI 480
                       K    +++ M       +++   PK  K    K+F+G LS + S+DE+
Sbjct: 82  SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEV 140

Query: 481 RNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 579
           R  F+ FG + EV +         KG  F+ ++
Sbjct: 141 RALFATFGELDEVTV-LRGADGASKGCAFVKYK 172



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 22/63 (34%), Positives = 37/63 (58%)
 Frame = +1

Query: 151 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 330
           D   A    + DD+KLF+G LS + ++ E+R  F  +GE++ + V    + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169

Query: 331 VFK 339
            +K
Sbjct: 170 KYK 172


>AY342388-1|AAQ19851.1|  514|Caenorhabditis elegans putative
           RNA-binding protein protein.
          Length = 514

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
 Frame = +1

Query: 172 PGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF---- 336
           P +D D  KLFVG +     +K+LR  F  +G+I    +  D  TG  +G AF+ +    
Sbjct: 22  PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81

Query: 337 ------------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI 480
                       K    +++ M       +++   PK  K    K+F+G LS + S+DE+
Sbjct: 82  SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEV 140

Query: 481 RNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 579
           R  F+ FG + EV +         KG  F+ ++
Sbjct: 141 RALFATFGELDEVTV-LRGADGASKGCAFVKYK 172



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 22/63 (34%), Positives = 37/63 (58%)
 Frame = +1

Query: 151 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 330
           D   A    + DD+KLF+G LS + ++ E+R  F  +GE++ + V    + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169

Query: 331 VFK 339
            +K
Sbjct: 170 KYK 172


>Z68297-5|CAC70081.1|  394|Caenorhabditis elegans Hypothetical
           protein F11A10.7 protein.
          Length = 394

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 24/171 (14%)
 Frame = +1

Query: 157 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVK---------------- 288
           ++A A   ++   +FVG +     +K +R  F  +G I S+ ++                
Sbjct: 132 SNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHL 191

Query: 289 TDPNTGRSRGFAFIV-FKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVG 447
           T     +     F V F A ES++K +        +H I   KV  KK +  +   IFVG
Sbjct: 192 TGKLNDKQSSLTFYVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVG 251

Query: 448 GLSSEISDDEIRNFFS-EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 597
            L  EI++D +  FFS + G +  V +  DK   + KGF F+ F+ +  V+
Sbjct: 252 NLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = +1

Query: 187 DRKLFVGGLSWETTDKELRDHFGAY-GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
           D  +FVG L +E T+  L   F A  G +E++ +  D +TG+ +GFAF+ FK   S+   
Sbjct: 245 DMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS-- 302

Query: 364 MAAGEHTINNKKVDPKKAK 420
           +A    TI  +K D +  K
Sbjct: 303 LALSMETIKMEKRDLRITK 321


>U28944-7|AAN63457.1|  295|Caenorhabditis elegans Hypothetical
           protein C18A3.5f protein.
          Length = 295

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 369
           +FVG LS E  +++LR+ F  +G++    V  D NT +S+G+ F+ +   E  ++ +   
Sbjct: 24  VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83

Query: 370 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 477
                G  TI                  N K  D    +    +  ++VG ++S +++DE
Sbjct: 84  NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 142

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 642
           IR  F+ FG I EV +       + +G+ F+ F++ +     +++   + +GG+ V
Sbjct: 143 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 192



 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 17/55 (30%), Positives = 32/55 (58%)
 Frame = +1

Query: 424 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
           RH  +FVG LSSE+ + ++R  F  FG + + ++  D    + KG+ F+++   +
Sbjct: 20  RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 74


>U28944-6|AAN63456.1|  305|Caenorhabditis elegans Hypothetical
           protein C18A3.5e protein.
          Length = 305

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 369
           +FVG LS E  +++LR+ F  +G++    V  D NT +S+G+ F+ +   E  ++ +   
Sbjct: 34  VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93

Query: 370 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 477
                G  TI                  N K  D    +    +  ++VG ++S +++DE
Sbjct: 94  NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 152

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 642
           IR  F+ FG I EV +       + +G+ F+ F++ +     +++   + +GG+ V
Sbjct: 153 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 202



 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 17/55 (30%), Positives = 32/55 (58%)
 Frame = +1

Query: 424 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
           RH  +FVG LSSE+ + ++R  F  FG + + ++  D    + KG+ F+++   +
Sbjct: 30  RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 84


>U28944-4|AAK68192.1|  376|Caenorhabditis elegans Hypothetical
           protein C18A3.5b protein.
          Length = 376

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 369
           +FVG LS E  +++LR+ F  +G++    V  D NT +S+G+ F+ +   E  ++ +   
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164

Query: 370 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 477
                G  TI                  N K  D    +    +  ++VG ++S +++DE
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 223

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 642
           IR  F+ FG I EV +       + +G+ F+ F++ +     +++   + +GG+ V
Sbjct: 224 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 273



 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 17/55 (30%), Positives = 32/55 (58%)
 Frame = +1

Query: 424 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
           RH  +FVG LSSE+ + ++R  F  FG + + ++  D    + KG+ F+++   +
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 155



 Score = 31.9 bits (69), Expect = 0.41
 Identities = 11/36 (30%), Positives = 24/36 (66%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 543
           ++VG L S +++D I   F++ G++ + ++ FD+ K
Sbjct: 48  LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83


>U23450-2|AAK31468.1|  302|Caenorhabditis elegans Hypothetical
           protein C30B5.4 protein.
          Length = 302

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 29/105 (27%), Positives = 55/105 (52%)
 Frame = +1

Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
           D   +++GGLS+  ++ ++   F  YGE+ +IN+  D +TG+S+GFAF+ +K   S   +
Sbjct: 36  DSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TI 93

Query: 364 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 498
           +A      N   +  +  +  H + +      E +DDE +  + E
Sbjct: 94  LAV--DNFNGISLHKRMIRVDHVEEYKVPKYKEDADDETKRLWEE 136



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 15/51 (29%), Positives = 33/51 (64%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
           I++GGLS  +S+ ++   FS++G ++ + +  DK   + KGF F+ ++ ++
Sbjct: 40  IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90


>Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical
           protein C18D11.4 protein.
          Length = 309

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 29/77 (37%), Positives = 38/77 (49%)
 Frame = +1

Query: 118 GNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDP 297
           G    GGG    +   +       + L V  LS  TT+K+LRD FG +GEI   ++  D 
Sbjct: 52  GGGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDR 111

Query: 298 NTGRSRGFAFIVFKAPE 348
            +G SRGF FI F   E
Sbjct: 112 PSGNSRGFGFIYFNLIE 128



 Score = 36.3 bits (80), Expect = 0.019
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +1

Query: 442 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
           V  LSS  ++ ++R+ F EFG I + ++ +D+     +GF FI F
Sbjct: 80  VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124


>AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical
           protein F58D5.1 protein.
          Length = 611

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 5/161 (3%)
 Frame = +1

Query: 136 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 315
           GG   D             +++VG +  +  +  L   F   G+I  + +  DP +G SR
Sbjct: 182 GGPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASR 241

Query: 316 GFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI---- 480
           G+AF+ +   E         + H I+  K         + ++F+G +    S DEI    
Sbjct: 242 GYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEEL 301

Query: 481 RNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 603
           +        ++   +P D  K + +GFCF+ F   +  +D+
Sbjct: 302 KTHAEGVVDVIVYSVP-DNEKIKNRGFCFVDFIDHKTASDI 341


>AJ297847-1|CAC16732.1|  619|Caenorhabditis elegans FOG-1 protein
           protein.
          Length = 619

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 34/173 (19%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPES 351
           K+FVGG+S     K +   FG +G +     VK  PN+ G+S       + F+V+   +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265

Query: 352 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 450
           + K+M+A      N             ++ P           KARH +I       F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325

Query: 451 LSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 609
           L   ++ +EI   FSEFG +L V +  D+     KG   +TFE +   N  L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
 Frame = +1

Query: 247 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 426
           HFG++  + + N   +    R         K+ +  +   A   HT+     +    +  
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203

Query: 427 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 582
             K+FVGG+S  ++   I  FF +FGT+  V+ P  +  N R          + F+ +  
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262

Query: 583 EQVVNDLLKTPKR 621
           EQ V  L+    R
Sbjct: 263 EQSVIKLMSACHR 275


>AJ297846-1|CAC16731.1|  619|Caenorhabditis elegans FOG-1 protein
           protein.
          Length = 619

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 34/173 (19%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPES 351
           K+FVGG+S     K +   FG +G +     VK  PN+ G+S       + F+V+   +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265

Query: 352 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 450
           + K+M+A      N             ++ P           KARH +I       F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325

Query: 451 LSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 609
           L   ++ +EI   FSEFG +L V +  D+     KG   +TFE +   N  L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
 Frame = +1

Query: 247 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 426
           HFG++  + + N   +    R         K+ +  +   A   HT+     +    +  
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203

Query: 427 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 582
             K+FVGG+S  ++   I  FF +FGT+  V+ P  +  N R          + F+ +  
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262

Query: 583 EQVVNDLLKTPKR 621
           EQ V  L+    R
Sbjct: 263 EQSVIKLMSACHR 275


>AC024826-10|AAM97977.1|  435|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3c protein.
          Length = 435

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 22/155 (14%)
 Frame = +1

Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
           D R L +  ++ +T  ++L + F A G +  + + TD  TGRS+G  ++ F   ES+   
Sbjct: 23  DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 82

Query: 364 MAAGEHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDE 477
           +A     +    +  ++  A   +                      + V  L  +I +  
Sbjct: 83  LALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKM 142

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 582
           IR+ F  FG I ++++  D  +  R GF  ITF +
Sbjct: 143 IRDIFESFGRIEKIDLEVDSNRENR-GFATITFRN 176



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 22/64 (34%), Positives = 34/64 (53%)
 Frame = +1

Query: 169 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 348
           APG      + V  L  +  +K +RD F ++G IE I+++ D N   +RGFA I F+  +
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178

Query: 349 SIDK 360
              K
Sbjct: 179 DAQK 182



 Score = 32.3 bits (70), Expect = 0.31
 Identities = 17/88 (19%), Positives = 39/88 (44%)
 Frame = +1

Query: 391 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 570
           N K++    +     + +  ++ +    ++  FFS  G + +V +  D    + KG C++
Sbjct: 12  NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71

Query: 571 TFESEQVVNDLLKTPKRTIGGKEVDVKR 654
            F  E+ V   L    + + G  + ++R
Sbjct: 72  EFWDEESVPLGLALNGQRLMGAPLQIQR 99


>AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3a protein.
          Length = 580

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 22/155 (14%)
 Frame = +1

Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
           D R L +  ++ +T  ++L + F A G +  + + TD  TGRS+G  ++ F   ES+   
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 227

Query: 364 MAAGEHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDE 477
           +A     +    +  ++  A   +                      + V  L  +I +  
Sbjct: 228 LALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKM 287

Query: 478 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 582
           IR+ F  FG I ++++  D  +  R GF  ITF +
Sbjct: 288 IRDIFESFGRIEKIDLEVDSNRENR-GFATITFRN 321



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 22/64 (34%), Positives = 34/64 (53%)
 Frame = +1

Query: 169 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 348
           APG      + V  L  +  +K +RD F ++G IE I+++ D N   +RGFA I F+  +
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323

Query: 349 SIDK 360
              K
Sbjct: 324 DAQK 327



 Score = 32.3 bits (70), Expect = 0.31
 Identities = 17/88 (19%), Positives = 39/88 (44%)
 Frame = +1

Query: 391 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 570
           N K++    +     + +  ++ +    ++  FFS  G + +V +  D    + KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216

Query: 571 TFESEQVVNDLLKTPKRTIGGKEVDVKR 654
            F  E+ V   L    + + G  + ++R
Sbjct: 217 EFWDEESVPLGLALNGQRLMGAPLQIQR 244


>AC024810-12|AAK68519.1|  619|Caenorhabditis elegans Feminization of
           germline protein1, isoform b protein.
          Length = 619

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 34/173 (19%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPES 351
           K+FVGG+S     K +   FG +G +     VK  PN+ G+S       + F+V+   +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265

Query: 352 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 450
           + K+M+A      N             ++ P           KARH +I       F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325

Query: 451 LSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 609
           L   ++ +EI   FSEFG +L V +  D+     KG   +TFE +   N  L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
 Frame = +1

Query: 247 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 426
           HFG++  + + N   +    R         K+ +  +   A   HT+     +    +  
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203

Query: 427 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 582
             K+FVGG+S  ++   I  FF +FGT+  V+ P  +  N R          + F+ +  
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262

Query: 583 EQVVNDLLKTPKR 621
           EQ V  L+    R
Sbjct: 263 EQSVIKLMSACHR 275


>Z78536-3|CAB01717.2|  360|Caenorhabditis elegans Hypothetical
           protein C07A4.1 protein.
          Length = 360

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
 Frame = +1

Query: 154 HNSAEAPG--RDDDRK---LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 318
           H+++E P   R D  K   +FVG LS + +++ L+  F  +GE+    V  D  T +S+G
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177

Query: 319 FAFIVFKAPESIDKVMAA------GEHTI--------NNKKVDPK--------KAKARHG 432
           + F+ F   ++ +  +A       G+  +        N+++   K          KA + 
Sbjct: 178 YGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNT 237

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ-VVNDLLK 609
            ++VG +S + +D ++R+ FS +G I EV +     K QR  + F+ +E ++     +++
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRI----FKTQR--YAFVRYEKKECATKAIME 291

Query: 610 TPKRTIGGKEV 642
              + + G +V
Sbjct: 292 MNGKEMAGNQV 302


>U21320-5|AAA62536.2|  332|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 7 protein.
          Length = 332

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
 Frame = +1

Query: 157 NSAEAPGRDDD--RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 330
           N AE P   +D  R LFVG +++ET++ +LR  F AYG+I+ + +  D   G+ RG+AFI
Sbjct: 91  NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149

Query: 331 VF 336
            +
Sbjct: 150 EY 151


>Z81108-1|CAB03236.1|   83|Caenorhabditis elegans Hypothetical
           protein R09B3.2 protein.
          Length = 83

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 21/57 (36%), Positives = 35/57 (61%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 366
           ++VG   ++TT++EL + F + G+I ++ +  D  TGR RGFAFI F    S  + +
Sbjct: 7   VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 585
           ++VG    + +++E+ NFFS  G I  V +  D+   + +GF FI F  E
Sbjct: 7   VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56


>Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical
           protein F56A8.6 protein.
          Length = 336

 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
           +FVG +S ++S+D IR+ FS+ G +L ++M  D+   + KG+ FI F   Q
Sbjct: 20  VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70



 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 175 GRD-DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 336
           G D   R +FVG +S++ ++  +R  F   G + SI +  D  TG+ +G+ FI F
Sbjct: 12  GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66


>AL110485-8|CAB60356.1|  434|Caenorhabditis elegans Hypothetical
           protein Y46G5A.13 protein.
          Length = 434

 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
 Frame = +1

Query: 169 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 348
           A G +D R LFV  L    TD+ L   F   G +    +  +   G +  +AF+ F    
Sbjct: 33  ASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE---GLNDPYAFVEFSDHN 89

Query: 349 SIDKVMAA--GEHTINNKK-----VDP--------KKAKARHGKIFVGGLSSEISDDEIR 483
                + +  G   +  +       +P        K   +RH  +FVG L SEI   ++R
Sbjct: 90  QATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLR 149

Query: 484 NFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
             F +FG + E ++  D   N+ KG+ F+++
Sbjct: 150 EAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 366
           +FVG L  E    +LR+ F  +GE+    +  D NT + +G+ F+ +   E  ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190



 Score = 34.7 bits (76), Expect = 0.058
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
 Frame = +1

Query: 379 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 552
           H  + K  D    +A A +  ++VG +++ + +DEIR  F  FG I EV         + 
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKI 289

Query: 553 KGFCFITFES-EQVVNDLLKTPKRTIGGKEV 642
           +G+ F+ FE+ E     +++     IGG+ V
Sbjct: 290 QGYAFVKFETKESAARAIVQMNNADIGGQIV 320


>U39997-3|AAK68389.1|  498|Caenorhabditis elegans Human daz (deleted
           in azoospermia)homolog protein 1 protein.
          Length = 498

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 609
           +IFVGG  +  ++ E+R  F +F  + +V+M       Q KG+ FITFE+E    ++ K 
Sbjct: 67  RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125

Query: 610 TPKR 621
           TPK+
Sbjct: 126 TPKQ 129



 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 24/97 (24%), Positives = 52/97 (53%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 372
           ++FVGG    TT+ ELR+HF  +  ++ + +    + G+S+G+ FI F+  +  +++   
Sbjct: 67  RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 122

Query: 373 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 483
                  +K+ PK+ + R  K+ +G    +I+ +  +
Sbjct: 123 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152


>AB025253-1|BAA88577.1|  499|Caenorhabditis elegans DAZ-1 protein.
          Length = 499

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 609
           +IFVGG  +  ++ E+R  F +F  + +V+M       Q KG+ FITFE+E    ++ K 
Sbjct: 68  RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126

Query: 610 TPKR 621
           TPK+
Sbjct: 127 TPKQ 130



 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 24/97 (24%), Positives = 52/97 (53%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 372
           ++FVGG    TT+ ELR+HF  +  ++ + +    + G+S+G+ FI F+  +  +++   
Sbjct: 68  RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 123

Query: 373 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 483
                  +K+ PK+ + R  K+ +G    +I+ +  +
Sbjct: 124 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153


>Z81106-3|CAB03222.1|   84|Caenorhabditis elegans Hypothetical
           protein R06C1.4 protein.
          Length = 84

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 17/47 (36%), Positives = 32/47 (68%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 336
           ++VG + ++ T++E+ ++F A G + ++ +  D  TGR RGFAF+ F
Sbjct: 8   VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 14/50 (28%), Positives = 30/50 (60%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 585
           ++VG +  + +++EI N+F+  G +  V + +D+   + +GF F+ F  E
Sbjct: 8   VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57


>AC024810-13|AAK68518.1|  405|Caenorhabditis elegans Feminization of
           germline protein1, isoform a protein.
          Length = 405

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 22/61 (36%), Positives = 33/61 (54%)
 Frame = +1

Query: 427 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 606
           H  +F+GGL   ++ +EI   FSEFG +L V +  D+     KG   +TFE +   N  L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163

Query: 607 K 609
           +
Sbjct: 164 E 164


>AL032631-4|CAE54917.1|  586|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2c protein.
          Length = 586

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 25/66 (37%), Positives = 34/66 (51%)
 Frame = +1

Query: 151 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 330
           + + AE   +     L+V  L     D  L+  F +YG I S  V TD N GRS+GF F+
Sbjct: 244 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 302

Query: 331 VFKAPE 348
            F+ PE
Sbjct: 303 CFEKPE 308



 Score = 37.1 bits (82), Expect = 0.011
 Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
 Frame = +1

Query: 250 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 390
           F  +G I S  V T    G+S+GF F+ F  PE  +  V A  + TI             
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230

Query: 391 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 531
                     KK +  KA    K +   ++V  L   + DD ++  F  +G I   ++  
Sbjct: 231 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 290

Query: 532 DKTKNQRKGFCFITFESEQ 588
           D+   + KGF F+ FE  +
Sbjct: 291 DE-NGRSKGFGFVCFEKPE 308



 Score = 36.3 bits (80), Expect = 0.019
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 366
           L+VG L  +  +  L + F A G + SI V  D  T  S G+A++ F+ P   ++ M
Sbjct: 34  LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90


>AL032631-3|CAE54916.1|  583|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2b protein.
          Length = 583

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 25/66 (37%), Positives = 34/66 (51%)
 Frame = +1

Query: 151 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 330
           + + AE   +     L+V  L     D  L+  F +YG I S  V TD N GRS+GF F+
Sbjct: 241 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 299

Query: 331 VFKAPE 348
            F+ PE
Sbjct: 300 CFEKPE 305



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
 Frame = +1

Query: 403 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 582
           DP   ++  G IF+  L   I +  I + FS FG IL  ++  D+     KG+ F+ FE+
Sbjct: 48  DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106

Query: 583 EQVV-NDLLKTPKRTIGGKEVDV 648
           E+   N + K     + GK+V V
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFV 129



 Score = 37.1 bits (82), Expect = 0.011
 Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
 Frame = +1

Query: 250 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 390
           F  +G I S  V T    G+S+GF F+ F  PE  +  V A  + TI             
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227

Query: 391 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 531
                     KK +  KA    K +   ++V  L   + DD ++  F  +G I   ++  
Sbjct: 228 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 287

Query: 532 DKTKNQRKGFCFITFESEQ 588
           D+   + KGF F+ FE  +
Sbjct: 288 DE-NGRSKGFGFVCFEKPE 305


>Z81108-4|CAB03237.1|   85|Caenorhabditis elegans Hypothetical
           protein R09B3.3 protein.
          Length = 85

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 17/47 (36%), Positives = 30/47 (63%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 336
           ++VG   ++TT+ +L ++F   G + ++ +  D  TGR RGFAF+ F
Sbjct: 6   VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 585
           ++VG    + ++D++ N+FS+ G +  V +  D+   + +GF F+ F  E
Sbjct: 6   VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55


>AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical
           protein Y111B2A.18 protein.
          Length = 258

 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
 Frame = +1

Query: 175 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APES 351
           G  +D+K++VG L  +  +KE+ D F  YG I+ +++K    +GR   FAF+ F+   ++
Sbjct: 4   GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59

Query: 352 IDKVMAAGEHTINNKKV 402
            D V A   +  + +++
Sbjct: 60  EDAVRARDGYEFDGRRI 76


>AL117204-22|CAB55151.1|  331|Caenorhabditis elegans Hypothetical
           protein Y116A8C.34 protein.
          Length = 331

 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = +1

Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 369
           R L+VGG + + T+K L   F  +G++ +I++  D  +G+ RGF F+ F   E  D  MA
Sbjct: 11  RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68



 Score = 37.9 bits (84), Expect = 0.006
 Identities = 13/52 (25%), Positives = 29/52 (55%)
 Frame = +1

Query: 424 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 579
           R   ++VGG + ++++  +   F  FG ++ + +P D    + +GF F+ F+
Sbjct: 9   RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60


>AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.
          Length = 258

 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
 Frame = +1

Query: 175 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APES 351
           G  +D+K++VG L  +  +KE+ D F  YG I+ +++K    +GR   FAF+ F+   ++
Sbjct: 4   GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59

Query: 352 IDKVMAAGEHTINNKKV 402
            D V A   +  + +++
Sbjct: 60  EDAVRARDGYEFDGRRI 76


>Z50044-2|CAA90354.1|  256|Caenorhabditis elegans Hypothetical
           protein F22B5.2 protein.
          Length = 256

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 22/64 (34%), Positives = 33/64 (51%)
 Frame = +1

Query: 178 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 357
           R D+    V  L  E  + ELRD FG  G +  I +  D  TG  +GFAF+ F++ +   
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231

Query: 358 KVMA 369
           + +A
Sbjct: 232 RAIA 235



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 18/47 (38%), Positives = 29/47 (61%)
 Frame = +1

Query: 442 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 582
           V  L  E+++DE+R+ F + G ++ + +  DK     KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226


>Z83127-4|CAB05631.1|  872|Caenorhabditis elegans Hypothetical
           protein T23F6.4 protein.
          Length = 872

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 351
           +LF+  L + T + +L+  F  YGE+  + V  D  TG  +GFA + F  PE+
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 23/69 (33%), Positives = 33/69 (47%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 372
           +L V  L    T+++LR  F  YG+I   ++K     G+ RGFAF+ F    S    +A 
Sbjct: 4   RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62

Query: 373 GEHTINNKK 399
              T  N K
Sbjct: 63  SNQTFFNSK 71


>U23484-3|AAK68298.1|  126|Caenorhabditis elegans Sr protein
           (splicing factor) protein4, isoform b protein.
          Length = 126

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 23/71 (32%), Positives = 38/71 (53%)
 Frame = +1

Query: 124 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 303
           +  GGGD +      AP  +    L +  LS++TT  +LR  F  YG+I  +++  D  +
Sbjct: 2   SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56

Query: 304 GRSRGFAFIVF 336
            +S+GF F+ F
Sbjct: 57  RQSKGFGFVRF 67


>U23484-2|AAC46767.1|  196|Caenorhabditis elegans Sr protein
           (splicing factor) protein4, isoform a protein.
          Length = 196

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 23/71 (32%), Positives = 38/71 (53%)
 Frame = +1

Query: 124 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 303
           +  GGGD +      AP  +    L +  LS++TT  +LR  F  YG+I  +++  D  +
Sbjct: 2   SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56

Query: 304 GRSRGFAFIVF 336
            +S+GF F+ F
Sbjct: 57  RQSKGFGFVRF 67


>U23484-11|AAC46764.2|  191|Caenorhabditis elegans Hypothetical
           protein EEED8.4 protein.
          Length = 191

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 17/61 (27%), Positives = 33/61 (54%)
 Frame = +1

Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
           D + +F+G + + +T +E+ +HF   G+I    +  D  T + + FA+I F    SI+  
Sbjct: 53  DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112

Query: 364 M 366
           +
Sbjct: 113 L 113


>Z50874-3|CAA90773.1|  409|Caenorhabditis elegans Hypothetical
           protein R10E4.2b protein.
          Length = 409

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
           +++ GL    +DD +R   S++G I   +   DK  N  KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159


>Z50874-2|CAA90772.1|  357|Caenorhabditis elegans Hypothetical
           protein R10E4.2a protein.
          Length = 357

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
           +++ GL    +DD +R   S++G I   +   DK  N  KG+ F+ FES Q
Sbjct: 83  LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133


>Z32683-11|CAA83626.1|  142|Caenorhabditis elegans Hypothetical
           protein R07E5.14 protein.
          Length = 142

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
 Frame = +1

Query: 142 DSQDHNSAEAPGRDDDRKL-FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 318
           D +   ++ AP R  +  + FV  +  E T+ ++ D F  YG+I++I++  D  TG  +G
Sbjct: 38  DEESSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKG 97

Query: 319 FAFIVFKAPESIDKVMAAGEHTI---NNKKVD 405
           +A + ++  +  ++ +     T     N KVD
Sbjct: 98  YALVEYETQKEANEAIDQSNDTDLLGQNVKVD 129



 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 615
           +FV  +  E ++D++ + FSE+G I  + +  D+     KG+  + +E+++  N+ +   
Sbjct: 57  VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116

Query: 616 KRT-IGGKEVDV 648
             T + G+ V V
Sbjct: 117 NDTDLLGQNVKV 128


>U55363-5|AAA97963.1|  351|Caenorhabditis elegans Spindle
           orientation defective protein4 protein.
          Length = 351

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = +1

Query: 172 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 351
           P    D +++V  + +   +++L   F AYG + S+ + T  N   S+GF F+   + ES
Sbjct: 45  PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102

Query: 352 IDKVMAA-GEHTINNKKVDPKKAKARHGKI 438
            +K  AA  E  +  + ++ ++A     K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132


>AB052819-1|BAC65239.1|  351|Caenorhabditis elegans PIP-1 protein.
          Length = 351

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = +1

Query: 172 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 351
           P    D +++V  + +   +++L   F AYG + S+ + T  N   S+GF F+   + ES
Sbjct: 45  PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102

Query: 352 IDKVMAA-GEHTINNKKVDPKKAKARHGKI 438
            +K  AA  E  +  + ++ ++A     K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132


>AF003141-14|AAM48549.1|  362|Caenorhabditis elegans Hypothetical
           protein W02D3.11b protein.
          Length = 362

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 22/66 (33%), Positives = 35/66 (53%)
 Frame = +1

Query: 208 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 387
           GL WE T++ELRD FG  G IES+ +      GR+ G A +VF   E  +  +      +
Sbjct: 11  GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67

Query: 388 NNKKVD 405
            ++ ++
Sbjct: 68  GSRYIE 73


>AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical
           protein W02D3.11a protein.
          Length = 549

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 22/66 (33%), Positives = 35/66 (53%)
 Frame = +1

Query: 208 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 387
           GL WE T++ELRD FG  G IES+ +      GR+ G A +VF   E  +  +      +
Sbjct: 11  GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67

Query: 388 NNKKVD 405
            ++ ++
Sbjct: 68  GSRYIE 73


>U23484-10|AAC46772.1|  197|Caenorhabditis elegans Hypothetical
           protein EEED8.12 protein.
          Length = 197

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = +1

Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
           D + +F+G + + +T +E+ +HF   G I    +  D  T + + FA+I F    SI+  
Sbjct: 59  DAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118

Query: 364 M 366
           +
Sbjct: 119 L 119


>AC024818-2|AAF60781.1|  302|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 262 protein.
          Length = 302

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/76 (21%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 609
           ++F G L +E+SD+ +   F ++ +  + ++  +   N+ KG+ F++F +SE  V  + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263

Query: 610 TPKRTIGGKEVDVKRA 657
              + +G + + ++++
Sbjct: 264 MDGKYVGNRPIKLRKS 279


>U79157-1|AAC26982.1|  496|Caenorhabditis elegans splicing factor
           U2AF65 protein.
          Length = 496

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 17/63 (26%), Positives = 37/63 (58%)
 Frame = +1

Query: 181 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 360
           D   K+F+GGL    T+ ++++   ++G +++ ++  D + G S+G+AF  +  P   D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346

Query: 361 VMA 369
            +A
Sbjct: 347 AIA 349



 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
           KIF+GGL + +++D+++     FG +    +  D   N  KG+ F  +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338


>AC024875-3|AAK29989.1|  496|Caenorhabditis elegans U2af splicing
           factor protein 1,isoform a protein.
          Length = 496

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 17/63 (26%), Positives = 37/63 (58%)
 Frame = +1

Query: 181 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 360
           D   K+F+GGL    T+ ++++   ++G +++ ++  D + G S+G+AF  +  P   D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346

Query: 361 VMA 369
            +A
Sbjct: 347 AIA 349



 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
           KIF+GGL + +++D+++     FG +    +  D   N  KG+ F  +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338


>AC024875-2|AAM44400.1|  471|Caenorhabditis elegans U2af splicing
           factor protein 1,isoform d protein.
          Length = 471

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 17/63 (26%), Positives = 37/63 (58%)
 Frame = +1

Query: 181 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 360
           D   K+F+GGL    T+ ++++   ++G +++ ++  D + G S+G+AF  +  P   D+
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 321

Query: 361 VMA 369
            +A
Sbjct: 322 AIA 324



 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
           KIF+GGL + +++D+++     FG +    +  D   N  KG+ F  +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313


>AC024875-1|AAL00879.1|  474|Caenorhabditis elegans U2af splicing
           factor protein 1,isoform c protein.
          Length = 474

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 17/63 (26%), Positives = 37/63 (58%)
 Frame = +1

Query: 181 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 360
           D   K+F+GGL    T+ ++++   ++G +++ ++  D + G S+G+AF  +  P   D+
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 324

Query: 361 VMA 369
            +A
Sbjct: 325 AIA 327



 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 576
           KIF+GGL + +++D+++     FG +    +  D   N  KG+ F  +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316


>U23484-7|ABB88232.1|  738|Caenorhabditis elegans Hypothetical
           protein EEED8.10a protein.
          Length = 738

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 11/131 (8%)
 Frame = +1

Query: 115 NGNAENGGG-DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI---- 279
           +G+A +GG  D  D + A      DDRK+ V  +S + T  +L+  F  YG+I S     
Sbjct: 86  DGDAFDGGETDDFDASIAFQHTSRDDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145

Query: 280 -NVKTD-----PNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIF 441
              KT      P   R+ G A I FK  E  D+   A    +  K  D     + +    
Sbjct: 146 EEKKTSVFGTLPKHSRNCGTATITFKKSEHADRAKNANPEEL--KFYDQVMVVSAYVSKK 203

Query: 442 VGGLSSEISDD 474
            GG    +SDD
Sbjct: 204 RGGKGLVLSDD 214


>AF040642-5|AAN73870.2|  138|Caenorhabditis elegans Hypothetical
           protein C50D2.5 protein.
          Length = 138

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 22/65 (33%), Positives = 35/65 (53%)
 Frame = +1

Query: 187 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 366
           +R L++  L ++ T +E+ + FG +G +  I V    NT  +RG AF+V+   E I    
Sbjct: 18  NRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAK 71

Query: 367 AAGEH 381
            A EH
Sbjct: 72  TACEH 76


>AF003145-3|AAB57717.1|  751|Caenorhabditis elegans Cpeb polya
           binding family protein 3 protein.
          Length = 751

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +1

Query: 190 RKLFVGGLSWETTDKELRDHFGAYG 264
           RK+FVGG+ W+ T+  L+D FG +G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319



 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 528
           KIFVGG+  +I++  +++ F EFG+   VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326


>Z78419-2|CAB01702.1|  154|Caenorhabditis elegans Hypothetical
           protein F26A3.2 protein.
          Length = 154

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 588
           ++VG LS    +D++   F   G +  V M  D+ K    GFCF+ + + +
Sbjct: 39  LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 20/85 (23%), Positives = 40/85 (47%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 375
           L+VG LS+ T + ++ + FG  G++  + +  D       GF F+ +   E  +  +   
Sbjct: 39  LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95

Query: 376 EHTINNKKVDPKKAKARHGKIFVGG 450
              I+N ++D +  +A     F+ G
Sbjct: 96  -QNISNTRMDDRVIRADWDAGFIEG 119


>Z19154-9|CAA79552.2|  559|Caenorhabditis elegans Hypothetical
           protein C40H1.1 protein.
          Length = 559

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
 Frame = +1

Query: 181 DDDRKLFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 357
           D  R +F+GG+   T  ++L R   G YG++  + +  DP     +G A + F   ++  
Sbjct: 362 DHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFV 421

Query: 358 KVMAAG----EHTINNKKVDPK 411
           + ++       H  NNK+V+ K
Sbjct: 422 RAISGRFVQVNHAENNKRVEIK 443



 Score = 31.1 bits (67), Expect = 0.72
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 361 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTIL 513
           +M   +  +   K  P  A+  +  K+F+GGL  ++S++++   F  FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272



 Score = 29.5 bits (63), Expect = 2.2
 Identities = 10/27 (37%), Positives = 21/27 (77%)
 Frame = +1

Query: 190 RKLFVGGLSWETTDKELRDHFGAYGEI 270
           RK+F+GGL  + +++++   FGA+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271


>AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical
           protein ZK616.1 protein.
          Length = 491

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF-DKTKNQRKGFCFITFESEQVVNDLL 606
           +++VGG S+ +S ++IRN  ++     EV +   +    + +GF F+   S    N LL
Sbjct: 10  RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68


>U23450-1|AAK31467.2|  422|Caenorhabditis elegans Cpeb polya binding
           family protein 2 protein.
          Length = 422

 Score = 35.9 bits (79), Expect = 0.025
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 528
           K+FVGGL S + + +I NFFS +G  L+V+ P
Sbjct: 89  KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119


>U23172-15|AAN63408.1|  374|Caenorhabditis elegans Hypothetical
           protein F25B5.7d protein.
          Length = 374

 Score = 35.9 bits (79), Expect = 0.025
 Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
 Frame = +1

Query: 118 GNAENGGGDSQDHNSAEAPGRDDDRK--LFVGGLSWETTDKELRDHFGAYGEIESINVKT 291
           G + NG   ++     E P +    +  LFVG L  E  + EL++ F  +G+I    +  
Sbjct: 90  GTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS- 148

Query: 292 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISD 471
                  +GFAF+        +    A +  I + +    +       I V  LS  +S+
Sbjct: 149 ------GKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSN 202

Query: 472 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 606
           + + + FS FG +       D+ K +  G   + FE +   N+ +
Sbjct: 203 EMLYHAFSHFGDVERAVHIVDE-KGRPTGEGIVEFERKPNCNEAM 246



 Score = 35.1 bits (77), Expect = 0.044
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = +1

Query: 406 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 585
           PKK      ++FVG L +E+ + E++  FS  G I E  +         KGF F+  ++ 
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160

Query: 586 QVVNDLLKT-PKRTIGGKEVDVKRA 657
                  +    R I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185


>U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical
           protein F25B5.7a protein.
          Length = 562

 Score = 35.9 bits (79), Expect = 0.025
 Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
 Frame = +1

Query: 118 GNAENGGGDSQDHNSAEAPGRDDDRK--LFVGGLSWETTDKELRDHFGAYGEIESINVKT 291
           G + NG   ++     E P +    +  LFVG L  E  + EL++ F  +G+I    +  
Sbjct: 90  GTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS- 148

Query: 292 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISD 471
                  +GFAF+        +    A +  I + +    +       I V  LS  +S+
Sbjct: 149 ------GKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSN 202

Query: 472 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 606
           + + + FS FG +       D+ K +  G   + FE +   N+ +
Sbjct: 203 EMLYHAFSHFGDVERAVHIVDE-KGRPTGEGIVEFERKPNCNEAM 246



 Score = 35.1 bits (77), Expect = 0.044
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = +1

Query: 406 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 585
           PKK      ++FVG L +E+ + E++  FS  G I E  +         KGF F+  ++ 
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160

Query: 586 QVVNDLLKT-PKRTIGGKEVDVKRA 657
                  +    R I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185


>Z69384-5|CAA93419.2|  408|Caenorhabditis elegans Hypothetical
           protein T11G6.8 protein.
          Length = 408

 Score = 35.5 bits (78), Expect = 0.033
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
 Frame = +1

Query: 196 LFVGGL----SWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 363
           L++G L    + + T+K+L D F  YG+I  + V T+      +G AFI F   E+ ++ 
Sbjct: 237 LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAER- 289

Query: 364 MAAGEHTINNKKVDPKKAKARHGK 435
             A E + N   +  K+   R G+
Sbjct: 290 --AAERSFNKTFIKGKRLTIRWGE 311


>Z97628-2|CAB10726.2|  427|Caenorhabditis elegans Hypothetical
           protein F39H2.2a protein.
          Length = 427

 Score = 35.1 bits (77), Expect = 0.044
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 360
           LFV  L+  TTD++L   F  +G+I +  +  D  +G S  +AFI F   +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297



 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 582
           +FV  L+   +D+++   FS FG I   E+  D+       + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291


>Z81080-5|CAB03088.2|  427|Caenorhabditis elegans Hypothetical
           protein F39H2.2a protein.
          Length = 427

 Score = 35.1 bits (77), Expect = 0.044
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 360
           LFV  L+  TTD++L   F  +G+I +  +  D  +G S  +AFI F   +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297



 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 582
           +FV  L+   +D+++   FS FG I   E+  D+       + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291


>Z81080-2|CAD56584.1|  358|Caenorhabditis elegans Hypothetical
           protein F39H2.2b protein.
          Length = 358

 Score = 35.1 bits (77), Expect = 0.044
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = +1

Query: 196 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 360
           LFV  L+  TTD++L   F  +G+I +  +  D  +G S  +AFI F   +S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228



 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 582
           +FV  L+   +D+++   FS FG I   E+  D+       + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222


>Z36238-3|CAA85276.1|  404|Caenorhabditis elegans Hypothetical
           protein R74.5a protein.
          Length = 404

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
 Frame = +1

Query: 136 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 315
           G  + +  S  +   D  R+L V  + ++  + +L   F   G +  ++V+   N   S+
Sbjct: 82  GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139

Query: 316 GFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 435
           GF F+  + P+  D+  A     TI  ++V+   A  R H K
Sbjct: 140 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181


>DQ485531-1|ABF22491.1|  404|Caenorhabditis elegans RNA-binding
           protein ASD-1 protein.
          Length = 404

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
 Frame = +1

Query: 136 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 315
           G  + +  S  +   D  R+L V  + ++  + +L   F   G +  ++V+   N   S+
Sbjct: 82  GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139

Query: 316 GFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 435
           GF F+  + P+  D+  A     TI  ++V+   A  R H K
Sbjct: 140 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181


>Z66521-4|CAD59160.1|  150|Caenorhabditis elegans Hypothetical
           protein W02B12.3c protein.
          Length = 150

 Score = 34.3 bits (75), Expect = 0.077
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 612
           +I++G L+S +S+ +I +FF  +G I +V +        + GF F+ F+ ++   D +  
Sbjct: 4   RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55

Query: 613 PK-RTIGGKEV 642
              + +GG+ V
Sbjct: 56  LNGKELGGERV 66



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/86 (20%), Positives = 39/86 (45%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 372
           ++++G L+   ++K++   F  YG+I  + +K         GF F+ F      +  +  
Sbjct: 4   RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53

Query: 373 GEHTINNKKVDPKKAKARHGKIFVGG 450
             H +N K++  ++    + K   GG
Sbjct: 54  --HDLNGKELGGERVILDYSKPRGGG 77


>Z66521-3|CAD59159.1|  148|Caenorhabditis elegans Hypothetical
           protein W02B12.3b protein.
          Length = 148

 Score = 34.3 bits (75), Expect = 0.077
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 612
           +I++G L+S +S+ +I +FF  +G I +V +        + GF F+ F+ ++   D +  
Sbjct: 4   RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55

Query: 613 PK-RTIGGKEV 642
              + +GG+ V
Sbjct: 56  LNGKELGGERV 66



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/86 (20%), Positives = 39/86 (45%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 372
           ++++G L+   ++K++   F  YG+I  + +K         GF F+ F      +  +  
Sbjct: 4   RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53

Query: 373 GEHTINNKKVDPKKAKARHGKIFVGG 450
             H +N K++  ++    + K   GG
Sbjct: 54  --HDLNGKELGGERVILDYSKPRGGG 77


>Z66521-2|CAA91395.1|  312|Caenorhabditis elegans Hypothetical
           protein W02B12.3a protein.
          Length = 312

 Score = 34.3 bits (75), Expect = 0.077
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 612
           +I++G L+S +S+ +I +FF  +G I +V +        + GF F+ F+ ++   D +  
Sbjct: 4   RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55

Query: 613 PK-RTIGGKEV 642
              + +GG+ V
Sbjct: 56  LNGKELGGERV 66



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/86 (20%), Positives = 39/86 (45%)
 Frame = +1

Query: 193 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 372
           ++++G L+   ++K++   F  YG+I  + +K         GF F+ F      +  +  
Sbjct: 4   RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53

Query: 373 GEHTINNKKVDPKKAKARHGKIFVGG 450
             H +N K++  ++    + K   GG
Sbjct: 54  --HDLNGKELGGERVILDYSKPRGGG 77


>Z83119-2|CAB05579.2|  608|Caenorhabditis elegans Hypothetical
           protein R05H10.2 protein.
          Length = 608

 Score = 33.9 bits (74), Expect = 0.10
 Identities = 13/54 (24%), Positives = 32/54 (59%)
 Frame = +1

Query: 184 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 345
           + + +F+  LS++T ++ +++    +G+I+   +    ++G S+G AF+ F  P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314


>U41007-10|AAL32214.1|  118|Caenorhabditis elegans Sr protein
           (splicing factor) protein6, isoform c protein.
          Length = 118

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 609
           K++VGGL S+ +  E+   F  FG I +V +       +  GF F+ ++  +   D ++
Sbjct: 4   KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57


>U41007-9|AAL32213.1|  153|Caenorhabditis elegans Sr protein
           (splicing factor) protein6, isoform b protein.
          Length = 153

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 609
           K++VGGL S+ +  E+   F  FG I +V +       +  GF F+ ++  +   D ++
Sbjct: 4   KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57


>U41007-8|AAA82270.1|  179|Caenorhabditis elegans Sr protein
           (splicing factor) protein6, isoform a protein.
          Length = 179

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 609
           K++VGGL S+ +  E+   F  FG I +V +       +  GF F+ ++  +   D ++
Sbjct: 4   KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57


>Z99279-4|CAB16494.1|  121|Caenorhabditis elegans Hypothetical
           protein Y57G11A.5 protein.
          Length = 121

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
 Frame = +1

Query: 184 DDRKLFVGGLSWETTDKEL-RDHFGAYGEIESI-----NVKTDPNTGRSRGFAFIVFK 339
           ++R+++VG + ++ T+KEL  D    Y  IE++      +K+     R  GFAF+ FK
Sbjct: 15  ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72


>Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
 Frame = +1

Query: 373 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 549
           G+HT   +     + K     +FVG +S + SD+ IR   +E G +     +     K Q
Sbjct: 31  GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87

Query: 550 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 651
             GFC  T + E  +  L    +  +G K++ VK
Sbjct: 88  GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120


>Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
 Frame = +1

Query: 373 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 549
           G+HT   +     + K     +FVG +S + SD+ IR   +E G +     +     K Q
Sbjct: 31  GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87

Query: 550 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 651
             GFC  T + E  +  L    +  +G K++ VK
Sbjct: 88  GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120


>U23172-14|AAL02495.1|  165|Caenorhabditis elegans Hypothetical
           protein F25B5.7b protein.
          Length = 165

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 406 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 516
           PKK      ++FVG L +E+ + E++  FS  G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144


>L07144-4|AAK21440.2|  187|Caenorhabditis elegans Hypothetical
           protein R05D3.8 protein.
          Length = 187

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +1

Query: 184 DDRKLFVGGLSWET-TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 360
           + ++LFV     +  T KEL+ +FGAYG+I  +   +D + G    F  I F    S+D 
Sbjct: 29  ESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDV 86

Query: 361 VM 366
           ++
Sbjct: 87  LL 88


>Z81120-1|CAB03342.1|  207|Caenorhabditis elegans Hypothetical
           protein T12D8.2 protein.
          Length = 207

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRN------FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV 594
           K F+GGL  +    +I        F  E     ++ +  D+     KGF ++TFE+EQ +
Sbjct: 7   KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQM 66

Query: 595 NDLLK-TPKRTIGGKEVDVKRA 657
           N  +        G + + V RA
Sbjct: 67  NTAISGLNGADFGNRVLKVNRA 88


>Z66521-8|CAA91394.1|  281|Caenorhabditis elegans Hypothetical
           protein W02B12.2 protein.
          Length = 281

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 17/70 (24%), Positives = 37/70 (52%)
 Frame = +1

Query: 433 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 612
           ++++G L +  SD ++ +FF  +G + +V M        + GF F+ F+ ++  +D +  
Sbjct: 3   RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV-- 52

Query: 613 PKRTIGGKEV 642
               + GKE+
Sbjct: 53  --HDLNGKEL 60


>Z99277-2|CAB16487.1|  557|Caenorhabditis elegans Hypothetical
           protein Y53C12A.3 protein.
          Length = 557

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
 Frame = +1

Query: 100 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI 279
           T+N    +  N GG   + N    P      +L  G + WE   K+++D F +YG I+  
Sbjct: 41  TENTRQRSNSNAGGSPDEQN----PQFGMQAQL--GKMMWEAGSKQVQDTFQSYGRIDLF 94

Query: 280 N--VKTDPNTGRSRGFAFIVFKAPESI 354
                 DP   R+R     + + P  I
Sbjct: 95  RPYFDVDPAEVRTRLIRSFIPRKPSQI 121


>Z35663-4|CAA84724.1|  307|Caenorhabditis elegans Hypothetical
           protein T04A8.6 protein.
          Length = 307

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 9/41 (21%), Positives = 24/41 (58%)
 Frame = +1

Query: 469 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 591
           + E+  +F +FG +L + +  ++     KG+ ++ F+++ V
Sbjct: 45  EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85


>U28944-8|AAK68193.1|  103|Caenorhabditis elegans Hypothetical
           protein C18A3.5c protein.
          Length = 103

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 10/34 (29%), Positives = 23/34 (67%)
 Frame = +1

Query: 436 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 537
           ++VG L S +++D I   F++ G++ + ++ FD+
Sbjct: 48  LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81


>L07144-9|AAK21441.1|  737|Caenorhabditis elegans Hypothetical
           protein R05D3.2 protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -3

Query: 620 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 507
           L+G L       S+ ++    PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193


>AF003140-8|AAB54169.1|  396|Caenorhabditis elegans Hypothetical
           protein C44E4.4 protein.
          Length = 396

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 22/111 (19%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
 Frame = +1

Query: 259 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKI 438
           +  + SI+  T+      +     +    E   K+    E+ +    ++  + K +H  +
Sbjct: 54  FNRLASISKDTEKIANAVKNSGSGIISVSEDNQKIRRNEENPVPENSLEYWQ-KIKHRTV 112

Query: 439 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-KGFCFITFESEQ 588
           ++ G S++   D+I  + ++FG    V M   K  ++  KG  FIT+++ +
Sbjct: 113 YMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163


>Z68160-1|CAA92294.2|  489|Caenorhabditis elegans Hypothetical
           protein D1046.1 protein.
          Length = 489

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
 Frame = +1

Query: 199 FVGGLSWETTDKELRDHFGAYGEIES--INVKTDPN--TGRSRGFAFIVFKAPESIDKVM 366
           +VG L W TTD +L     + G   S   ++K   N   G+S+G+A +V  +  ++ + M
Sbjct: 87  YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146


>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -2

Query: 285  YINTLYFTVCSKMITELLICGLPAQPTNKKFSVVIASWGLSTVMILRITATVL 127
            Y NT   TV +K + E  +  +   PT  K  ++  SW +S V  + +  T L
Sbjct: 1864 YANTTVGTVAAKFLREAALL-MDTPPTTPKERLLQCSWAMSKVPFINMILTCL 1915


>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
            protein F10F2.1 protein.
          Length = 2507

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 70   NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 195
            N++N   + + +N  NG   NGG +    N  E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364


>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
            F10F2.1 protein.
          Length = 2507

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 70   NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 195
            N++N   + + +N  NG   NGG +    N  E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364


>Z69634-9|CAO82013.1|  575|Caenorhabditis elegans Hypothetical
           protein B0001.3b protein.
          Length = 575

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 91  DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 189
           D+   N+ N ++ + GGDS    + E    DDD
Sbjct: 416 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 448


>Z69634-8|CAA93452.4|  591|Caenorhabditis elegans Hypothetical
           protein B0001.3a protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 91  DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 189
           D+   N+ N ++ + GGDS    + E    DDD
Sbjct: 432 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 464


>AC024791-14|AAF60658.1|  767|Caenorhabditis elegans P300/cbp
           associated factor homologprotein 1 protein.
          Length = 767

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 310 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 429
           SRGF  IVF A  ++++V   G H +N+ K    K K  H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526


>AF099920-4|AAK29844.2|  363|Caenorhabditis elegans Serpentine
           receptor, class w protein95 protein.
          Length = 363

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 149 CESPPPFSAFPLSWLSVVIS 90
           CE P P S F + W++VVI+
Sbjct: 107 CEPPAPLSFFYMYWINVVIN 126


>AF067619-1|AAC17568.2|  368|Caenorhabditis elegans Hypothetical
           protein K03E5.3 protein.
          Length = 368

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 287 RQIQTQADHEGLPSLCLR 340
           + I+T  D EG+PS CLR
Sbjct: 74  KMIRTDRDEEGIPSTCLR 91


>AC024746-7|AAF60403.1|  246|Caenorhabditis elegans Hypothetical
           protein Y110A2AL.5 protein.
          Length = 246

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -2

Query: 228 CGLPAQPTNKKFSVVIASWGLSTVMILRITATVLCISIKLVVGG 97
           C  P QP  +  S+V+  W  +  +  R  A   CI   L + G
Sbjct: 143 CPAPGQPFRRTESLVVCIWTFNETVATREEAKTFCIGKGLKLTG 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.314    0.134    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,478,413
Number of Sequences: 27780
Number of extensions: 329434
Number of successful extensions: 1075
Number of sequences better than 10.0: 130
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)

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