Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0053
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    52   2e-09
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    52   2e-09
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    50   2e-08
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    49   2e-08
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   4.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.6  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 52.4 bits (120), Expect = 2e-09
 Identities = 20/49 (40%), Positives = 32/49 (65%)
 Frame = +2

Query: 365 LYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLI 511
           +  P D E++LS+  +++K+  Y     WLG GLL STG KW++ RK++
Sbjct: 89  ILSPEDCELVLSNPTHMEKSAIYNLLHDWLGTGLLTSTGLKWQTRRKIL 137


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 52.4 bits (120), Expect = 2e-09
 Identities = 20/49 (40%), Positives = 32/49 (65%)
 Frame = +2

Query: 365 LYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLI 511
           +  P D E++LS+  +++K+  Y     WLG GLL STG KW++ RK++
Sbjct: 89  ILSPEDCELVLSNPTHMEKSAIYNLLHDWLGTGLLTSTGLKWQTRRKIL 137


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 49.6 bits (113), Expect = 2e-08
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = +2

Query: 359 VFLYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLI 511
           V L +P DVE++L+      K+  Y F   WLG GLL S G KW++ RK++
Sbjct: 80  VNLLNPEDVELVLTDTKQNTKSFIYHFLHSWLGTGLLTSAGPKWQNRRKIL 130


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 49.2 bits (112), Expect = 2e-08
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = +2

Query: 359 VFLYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLI 511
           V L +P DVE++L+      K+  Y F   WLG GLL S G KW++ RK++
Sbjct: 80  VNLLNPEDVELVLTDTKQNTKSFIYHFLHSWLGTGLLTSRGPKWQNRRKIL 130


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 294 FRKALTTITNPSLRSG 341
           FR+ L    NPSLR G
Sbjct: 23  FRRGLRLHDNPSLREG 38


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 110 SAINLFYVLLVPAVILWYAYW 172
           S    +  LL+   ILW  YW
Sbjct: 42  SLAKCYACLLMVVKILWVIYW 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,579
Number of Sequences: 336
Number of extensions: 2242
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)